RNA–Protein interactions for RNA: ENST00000493166.1

CLIP2-209, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 4

Gene CLIP2, Length 561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-209ENST00000493166 SIRT1Q96EB6 747 aa18.35■□□□□ 0.53
CLIP2-209ENST00000493166 TRAK1Q9UPV9 953 aa18.35■□□□□ 0.53
CLIP2-209ENST00000493166 PHLPP1O60346 1717 aa18.35■□□□□ 0.53
CLIP2-209ENST00000493166 FMN2Q9NZ56 1722 aa18.35■□□□□ 0.53
CLIP2-209ENST00000493166 MST1RQ04912 1400 aa18.34■□□□□ 0.53
CLIP2-209ENST00000493166 CCER1Q8TC90 406 aaPredicted RBP18.34■□□□□ 0.53
CLIP2-209ENST00000493166 PRAM1Q96QH2 718 aa18.33■□□□□ 0.52
CLIP2-209ENST00000493166 POGKQ9P215 609 aa18.33■□□□□ 0.52
CLIP2-209ENST00000493166 RGPD8O14715 1765 aaPredicted RBP18.32■□□□□ 0.52
CLIP2-209ENST00000493166 NBPF1Q3BBV0 1214 aa18.32■□□□□ 0.52
CLIP2-209ENST00000493166 ADGRB2O60241 1585 aa18.31■□□□□ 0.52
CLIP2-209ENST00000493166 HSPA1LP34931 641 aa18.31■□□□□ 0.52
CLIP2-209ENST00000493166 SAFB2Q14151 953 aaKnown RBP eCLIP18.31■□□□□ 0.52
CLIP2-209ENST00000493166 QRICH2Q9H0J4 1663 aa18.3■□□□□ 0.52
CLIP2-209ENST00000493166 NHSL1Q5SYE7 1610 aa18.3■□□□□ 0.52
CLIP2-209ENST00000493166 ROCK2O75116 1388 aaKnown RBP18.3■□□□□ 0.52
CLIP2-209ENST00000493166 C1orf167Q5SNV9 1468 aa18.28■□□□□ 0.52
CLIP2-209ENST00000493166 NBPF8Q3BBV2 869 aa18.28■□□□□ 0.52
CLIP2-209ENST00000493166 DISP3Q9P2K9 1392 aa18.28■□□□□ 0.52
CLIP2-209ENST00000493166 AHDC1Q5TGY3 1603 aaPredicted RBP18.27■□□□□ 0.52
CLIP2-209ENST00000493166 RALGAPBQ86X10 1494 aa18.26■□□□□ 0.51
CLIP2-209ENST00000493166 COL16A1Q07092 1604 aaPredicted RBP18.25■□□□□ 0.51
CLIP2-209ENST00000493166 BRINP3Q76B58 766 aa18.25■□□□□ 0.51
CLIP2-209ENST00000493166 MINK1Q8N4C8 1332 aaPredicted RBP18.24■□□□□ 0.51
CLIP2-209ENST00000493166 KIF1AQ12756 1690 aa18.24■□□□□ 0.51
CLIP2-209ENST00000493166 ITSN1Q15811 1721 aa18.23■□□□□ 0.51
CLIP2-209ENST00000493166 HIRIP3Q9BW71 556 aaPredicted RBP18.23■□□□□ 0.51
CLIP2-209ENST00000493166 USP32Q8NFA0 1604 aa18.23■□□□□ 0.51
CLIP2-209ENST00000493166 GPRASP1Q5JY77 1395 aa18.22■□□□□ 0.51
CLIP2-209ENST00000493166 NUTM2FA1L443 756 aa18.22■□□□□ 0.51
CLIP2-209ENST00000493166 TIMELESSQ9UNS1 1208 aa18.22■□□□□ 0.51
CLIP2-209ENST00000493166 EIF3AQ14152 1382 aaKnown RBP18.2■□□□□ 0.5
CLIP2-209ENST00000493166 TULP4Q9NRJ4 1543 aa18.2■□□□□ 0.5
CLIP2-209ENST00000493166 ORAI2Q96SN7 254 aa18.2■□□□□ 0.5
CLIP2-209ENST00000493166 CENPJQ9HC77 1338 aaPredicted RBP18.2■□□□□ 0.5
CLIP2-209ENST00000493166 ESCO1Q5FWF5 840 aa18.19■□□□□ 0.5
CLIP2-209ENST00000493166 CARD11Q9BXL7 1154 aa18.19■□□□□ 0.5
CLIP2-209ENST00000493166 SHPRHQ149N8 1683 aa18.18■□□□□ 0.5
CLIP2-209ENST00000493166 ANKARQ7Z5J8 1434 aa18.18■□□□□ 0.5
CLIP2-209ENST00000493166 WASLO00401 505 aaPredicted RBP18.17■□□□□ 0.5
CLIP2-209ENST00000493166 ILDR2Q71H61 639 aa18.17■□□□□ 0.5
CLIP2-209ENST00000493166 TOPAZ1Q8N9V7 1692 aa18.16■□□□□ 0.5
CLIP2-209ENST00000493166 DDX17Q92841 729 aaKnown RBP18.15■□□□□ 0.5
CLIP2-209ENST00000493166 MED1Q15648 1581 aaPredicted RBP18.13■□□□□ 0.49
CLIP2-209ENST00000493166 NPHP3Q7Z494 1330 aa18.13■□□□□ 0.49
CLIP2-209ENST00000493166 JCADQ9P266 1359 aa18.13■□□□□ 0.49
CLIP2-209ENST00000493166 ATP7BP35670 1465 aa18.13■□□□□ 0.49
CLIP2-209ENST00000493166 CDK19Q9BWU1 502 aa18.12■□□□□ 0.49
CLIP2-209ENST00000493166 PHF8Q9UPP1 1060 aa18.12■□□□□ 0.49
CLIP2-209ENST00000493166 PRR36Q9H6K5 1346 aa18.11■□□□□ 0.49
CLIP2-209ENST00000493166 PXDNQ92626 1479 aa18.11■□□□□ 0.49
CLIP2-209ENST00000493166 FOXO3O43524 673 aa18.1■□□□□ 0.49
CLIP2-209ENST00000493166 SOS2Q07890 1332 aaPredicted RBP18.09■□□□□ 0.49
CLIP2-209ENST00000493166 LRRC59Q96AG4 307 aaKnown RBP18.09■□□□□ 0.49
CLIP2-209ENST00000493166 EVC2Q86UK5 1308 aa18.08■□□□□ 0.49
CLIP2-209ENST00000493166 SRPK2P78362 688 aaKnown RBP18.08■□□□□ 0.48
CLIP2-209ENST00000493166 PMFBP1Q8TBY8 1022 aa18.08■□□□□ 0.48
CLIP2-209ENST00000493166 NUDT16Q96DE0 195 aaKnown RBP18.08■□□□□ 0.48
CLIP2-209ENST00000493166 SBNO2Q9Y2G9 1366 aa18.07■□□□□ 0.48
CLIP2-209ENST00000493166 XPCQ01831 940 aaPredicted RBP18.07■□□□□ 0.48
CLIP2-209ENST00000493166 TRPM3Q9HCF6 1732 aaPredicted RBP18.06■□□□□ 0.48
CLIP2-209ENST00000493166 COL22A1Q8NFW1 1626 aaPredicted RBP18.06■□□□□ 0.48
CLIP2-209ENST00000493166 USP47Q96K76 1375 aa18.05■□□□□ 0.48
CLIP2-209ENST00000493166 CABP2Q9NPB3 220 aa18.05■□□□□ 0.48
CLIP2-209ENST00000493166 PNPLA6Q8IY17 1366 aa18.04■□□□□ 0.48
CLIP2-209ENST00000493166 SPATA31A6Q5VVP1 1343 aa18.04■□□□□ 0.48
CLIP2-209ENST00000493166 KRT28Q7Z3Y7 464 aa18.04■□□□□ 0.48
CLIP2-209ENST00000493166 CCDC61Q9Y6R9 512 aa18.04■□□□□ 0.48
CLIP2-209ENST00000493166 PSME1Q06323 249 aa18.03■□□□□ 0.48
CLIP2-209ENST00000493166 NGDNQ8NEJ9 315 aaKnown RBP18.03■□□□□ 0.48
CLIP2-209ENST00000493166 PPIP5K1Q6PFW1 1433 aa18.03■□□□□ 0.48
CLIP2-209ENST00000493166 ALS2Q96Q42 1657 aa18.03■□□□□ 0.48
CLIP2-209ENST00000493166 AKAP12Q02952 1782 aa18.02■□□□□ 0.48
CLIP2-209ENST00000493166 ST20-MTHFSA0A0A6YYL1 179 aa18.02■□□□□ 0.48
CLIP2-209ENST00000493166 MARF1Q9Y4F3 1742 aaKnown RBP18.02■□□□□ 0.48
CLIP2-209ENST00000493166 TNS3Q68CZ2 1445 aa18.01■□□□□ 0.47
CLIP2-209ENST00000493166 LRP6O75581 1613 aa18.01■□□□□ 0.47
CLIP2-209ENST00000493166 SBNO1A3KN83 1393 aa18■□□□□ 0.47
CLIP2-209ENST00000493166 ABCA3Q99758 1704 aa18■□□□□ 0.47
CLIP2-209ENST00000493166 POLR3AO14802 1390 aaPredicted RBP17.99■□□□□ 0.47
CLIP2-209ENST00000493166 ATAD2Q6PL18 1390 aa17.99■□□□□ 0.47
CLIP2-209ENST00000493166 ACEP12821 1306 aa17.98■□□□□ 0.47
CLIP2-209ENST00000493166 SPATA31A3Q5VYP0 1347 aa17.98■□□□□ 0.47
CLIP2-209ENST00000493166 PLEKHG3A1L390 1219 aa17.98■□□□□ 0.47
CLIP2-209ENST00000493166 NUTM2BA6NNL0 878 aaPredicted RBP17.98■□□□□ 0.47
CLIP2-209ENST00000493166 NUTM2EB1AL46 878 aaPredicted RBP17.98■□□□□ 0.47
CLIP2-209ENST00000493166 NUTM2AQ8IVF1 878 aaPredicted RBP17.98■□□□□ 0.47
CLIP2-209ENST00000493166 TESK2Q96S53 571 aa17.98■□□□□ 0.47
CLIP2-209ENST00000493166 PHF23Q9BUL5 403 aaPredicted RBP17.98■□□□□ 0.47
CLIP2-209ENST00000493166 SLC24A1O60721 1099 aa17.97■□□□□ 0.47
CLIP2-209ENST00000493166 MEX3CQ5U5Q3 659 aaKnown RBP17.97■□□□□ 0.47
CLIP2-209ENST00000493166 ARHGEF10O15013 1369 aa17.96■□□□□ 0.47
CLIP2-209ENST00000493166 MON2Q7Z3U7 1717 aa17.96■□□□□ 0.47
CLIP2-209ENST00000493166 SOCS7O14512 581 aa17.96■□□□□ 0.47
CLIP2-209ENST00000493166 LMOD2Q6P5Q4 547 aa17.96■□□□□ 0.47
CLIP2-209ENST00000493166 CABP1Q9NZU7 370 aa17.95■□□□□ 0.46
CLIP2-209ENST00000493166 CRYBG1Q9Y4K1 1723 aa17.95■□□□□ 0.46
CLIP2-209ENST00000493166 PAK3O75914 559 aaPredicted RBP17.94■□□□□ 0.46
CLIP2-209ENST00000493166 TMF1P82094 1093 aa17.93■□□□□ 0.46
CLIP2-209ENST00000493166 NRKQ7Z2Y5 1582 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms