RNA–Protein interactions for RNA: ENST00000493007.1

PITPNB-210, Transcript of phosphatidylinositol transfer protein beta, humanhuman

TSL 3

Gene PITPNB, Length 564 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PITPNB-210ENST00000493007 STK26Q9P289 416 aa13.12□□□□□ -0.31
PITPNB-210ENST00000493007 IFT172Q9UG01 1749 aa13.12□□□□□ -0.31
PITPNB-210ENST00000493007 C19orf44Q9H6X5 657 aa13.11□□□□□ -0.31
PITPNB-210ENST00000493007 MKRN4PQ13434 485 aaPredicted RBP13.1□□□□□ -0.31
PITPNB-210ENST00000493007 LRPPRCP42704 1394 aaKnown RBP13.09□□□□□ -0.31
PITPNB-210ENST00000493007 ROBO2Q9HCK4 1378 aa13.09□□□□□ -0.31
PITPNB-210ENST00000493007 SPDYE2BA6NHP3 402 aa13.09□□□□□ -0.31
PITPNB-210ENST00000493007 SPDYE6P0CI01 402 aa13.09□□□□□ -0.31
PITPNB-210ENST00000493007 SPDYE2Q495Y8 402 aa13.09□□□□□ -0.31
PITPNB-210ENST00000493007 ABCC11Q96J66 1382 aa13.08□□□□□ -0.31
PITPNB-210ENST00000493007 SETD1AO15047 1707 aaKnown RBP13.08□□□□□ -0.32
PITPNB-210ENST00000493007 XRN1Q8IZH2 1706 aaKnown RBP13.08□□□□□ -0.32
PITPNB-210ENST00000493007 PTCH1Q13635 1447 aa13.08□□□□□ -0.32
PITPNB-210ENST00000493007 ATF3P18847 181 aa13.08□□□□□ -0.32
PITPNB-210ENST00000493007 CHRDL2Q6WN34 429 aa13.08□□□□□ -0.32
PITPNB-210ENST00000493007 PRAG1Q86YV5 1406 aa13.07□□□□□ -0.32
PITPNB-210ENST00000493007 YTHDC2Q9H6S0 1430 aaKnown RBP13.07□□□□□ -0.32
PITPNB-210ENST00000493007 WAPLQ7Z5K2 1190 aa13.07□□□□□ -0.32
PITPNB-210ENST00000493007 CADPS2Q86UW7 1296 aa13.07□□□□□ -0.32
PITPNB-210ENST00000493007 SLAIN2Q9P270 581 aa13.07□□□□□ -0.32
PITPNB-210ENST00000493007 XIRP1Q702N8 1843 aaKnown RBP13.06□□□□□ -0.32
PITPNB-210ENST00000493007 REM2Q8IYK8 340 aaPredicted RBP13.06□□□□□ -0.32
PITPNB-210ENST00000493007 SIRT1Q96EB6 747 aa13.06□□□□□ -0.32
PITPNB-210ENST00000493007 ASXL1Q8IXJ9 1541 aa13.06□□□□□ -0.32
PITPNB-210ENST00000493007 TECPR2O15040 1411 aa13.05□□□□□ -0.32
PITPNB-210ENST00000493007 TRAK1Q9UPV9 953 aa13.04□□□□□ -0.32
PITPNB-210ENST00000493007 TONSLQ96HA7 1378 aa13.04□□□□□ -0.32
PITPNB-210ENST00000493007 FAM135BQ49AJ0 1406 aa13.04□□□□□ -0.32
PITPNB-210ENST00000493007 ADGRL3Q9HAR2 1447 aa13.04□□□□□ -0.32
PITPNB-210ENST00000493007 LAMC1P11047 1609 aa13.03□□□□□ -0.32
PITPNB-210ENST00000493007 NBPF1Q3BBV0 1214 aa13.03□□□□□ -0.32
PITPNB-210ENST00000493007 CLSPNQ9HAW4 1339 aa13.03□□□□□ -0.32
PITPNB-210ENST00000493007 DCCP43146 1447 aa13.03□□□□□ -0.32
PITPNB-210ENST00000493007 HSPA1LP34931 641 aa13.02□□□□□ -0.33
PITPNB-210ENST00000493007 CCER1Q8TC90 406 aaPredicted RBP13.02□□□□□ -0.33
PITPNB-210ENST00000493007 PRAM1Q96QH2 718 aa13.02□□□□□ -0.33
PITPNB-210ENST00000493007 POGKQ9P215 609 aa13.02□□□□□ -0.33
PITPNB-210ENST00000493007 PLEKHH1Q9ULM0 1364 aa13.02□□□□□ -0.33
PITPNB-210ENST00000493007 ADGRB1O14514 1584 aa13.02□□□□□ -0.33
PITPNB-210ENST00000493007 SAFB2Q14151 953 aaKnown RBP eCLIP13□□□□□ -0.33
PITPNB-210ENST00000493007 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.99□□□□□ -0.33
PITPNB-210ENST00000493007 NBPF8Q3BBV2 869 aa12.99□□□□□ -0.33
PITPNB-210ENST00000493007 BRINP3Q76B58 766 aa12.98□□□□□ -0.33
PITPNB-210ENST00000493007 DLC1Q96QB1 1528 aa12.98□□□□□ -0.33
PITPNB-210ENST00000493007 MST1RQ04912 1400 aa12.97□□□□□ -0.33
PITPNB-210ENST00000493007 ZNF692Q9BU19 519 aaPredicted RBP12.97□□□□□ -0.33
PITPNB-210ENST00000493007 KNDC1Q76NI1 1749 aa12.96□□□□□ -0.33
PITPNB-210ENST00000493007 NUTM2FA1L443 756 aa12.96□□□□□ -0.33
PITPNB-210ENST00000493007 TIMELESSQ9UNS1 1208 aa12.96□□□□□ -0.33
PITPNB-210ENST00000493007 C1orf167Q5SNV9 1468 aa12.96□□□□□ -0.34
PITPNB-210ENST00000493007 ROCK2O75116 1388 aaKnown RBP12.95□□□□□ -0.34
PITPNB-210ENST00000493007 MINK1Q8N4C8 1332 aaPredicted RBP12.95□□□□□ -0.34
PITPNB-210ENST00000493007 ORAI2Q96SN7 254 aa12.95□□□□□ -0.34
PITPNB-210ENST00000493007 HIRIP3Q9BW71 556 aaPredicted RBP12.95□□□□□ -0.34
PITPNB-210ENST00000493007 NALCNQ8IZF0 1738 aa12.95□□□□□ -0.34
PITPNB-210ENST00000493007 KIAA1210Q9ULL0 1709 aa12.94□□□□□ -0.34
PITPNB-210ENST00000493007 ROBO1Q9Y6N7 1651 aa12.94□□□□□ -0.34
PITPNB-210ENST00000493007 ESCO1Q5FWF5 840 aa12.94□□□□□ -0.34
PITPNB-210ENST00000493007 CDC42BPGQ6DT37 1551 aa12.92□□□□□ -0.34
PITPNB-210ENST00000493007 CARD11Q9BXL7 1154 aa12.92□□□□□ -0.34
PITPNB-210ENST00000493007 CENPJQ9HC77 1338 aaPredicted RBP12.91□□□□□ -0.34
PITPNB-210ENST00000493007 WASLO00401 505 aaPredicted RBP12.91□□□□□ -0.34
PITPNB-210ENST00000493007 PITPNM1O00562 1244 aa12.91□□□□□ -0.34
PITPNB-210ENST00000493007 DDX17Q92841 729 aaKnown RBP12.91□□□□□ -0.34
PITPNB-210ENST00000493007 GPRASP1Q5JY77 1395 aa12.91□□□□□ -0.34
PITPNB-210ENST00000493007 SSUH2Q9Y2M2 353 aa12.9□□□□□ -0.34
PITPNB-210ENST00000493007 TRPM1Q7Z4N2 1603 aa12.9□□□□□ -0.34
PITPNB-210ENST00000493007 FOXO3O43524 673 aa12.88□□□□□ -0.35
PITPNB-210ENST00000493007 CDK19Q9BWU1 502 aa12.88□□□□□ -0.35
PITPNB-210ENST00000493007 RALGAPBQ86X10 1494 aa12.88□□□□□ -0.35
PITPNB-210ENST00000493007 EIF3AQ14152 1382 aaKnown RBP12.87□□□□□ -0.35
PITPNB-210ENST00000493007 LRRC59Q96AG4 307 aaKnown RBP12.87□□□□□ -0.35
PITPNB-210ENST00000493007 PHF8Q9UPP1 1060 aa12.87□□□□□ -0.35
PITPNB-210ENST00000493007 ARHGEF28Q8N1W1 1705 aaKnown RBP12.87□□□□□ -0.35
PITPNB-210ENST00000493007 AHDC1Q5TGY3 1603 aaPredicted RBP12.87□□□□□ -0.35
PITPNB-210ENST00000493007 NPHP3Q7Z494 1330 aa12.87□□□□□ -0.35
PITPNB-210ENST00000493007 ADGRB2O60241 1585 aa12.86□□□□□ -0.35
PITPNB-210ENST00000493007 JCADQ9P266 1359 aa12.86□□□□□ -0.35
PITPNB-210ENST00000493007 NUDT16Q96DE0 195 aaKnown RBP12.86□□□□□ -0.35
PITPNB-210ENST00000493007 ANKARQ7Z5J8 1434 aa12.86□□□□□ -0.35
PITPNB-210ENST00000493007 SOS2Q07890 1332 aaPredicted RBP12.86□□□□□ -0.35
PITPNB-210ENST00000493007 PRR36Q9H6K5 1346 aa12.86□□□□□ -0.35
PITPNB-210ENST00000493007 PMFBP1Q8TBY8 1022 aa12.85□□□□□ -0.35
PITPNB-210ENST00000493007 PHLPP1O60346 1717 aa12.85□□□□□ -0.35
PITPNB-210ENST00000493007 FMN2Q9NZ56 1722 aa12.85□□□□□ -0.35
PITPNB-210ENST00000493007 SRPK2P78362 688 aaKnown RBP12.84□□□□□ -0.35
PITPNB-210ENST00000493007 XPCQ01831 940 aaPredicted RBP12.84□□□□□ -0.35
PITPNB-210ENST00000493007 TULP4Q9NRJ4 1543 aa12.83□□□□□ -0.35
PITPNB-210ENST00000493007 KRT28Q7Z3Y7 464 aa12.83□□□□□ -0.36
PITPNB-210ENST00000493007 SPDYE1Q8NFV5 336 aaPredicted RBP12.83□□□□□ -0.36
PITPNB-210ENST00000493007 CABP2Q9NPB3 220 aa12.83□□□□□ -0.36
PITPNB-210ENST00000493007 COL16A1Q07092 1604 aaPredicted RBP12.83□□□□□ -0.36
PITPNB-210ENST00000493007 EVC2Q86UK5 1308 aa12.83□□□□□ -0.36
PITPNB-210ENST00000493007 PSME1Q06323 249 aa12.82□□□□□ -0.36
PITPNB-210ENST00000493007 CCDC61Q9Y6R9 512 aa12.82□□□□□ -0.36
PITPNB-210ENST00000493007 ST20-MTHFSA0A0A6YYL1 179 aa12.81□□□□□ -0.36
PITPNB-210ENST00000493007 NGDNQ8NEJ9 315 aaKnown RBP12.81□□□□□ -0.36
PITPNB-210ENST00000493007 SP7Q8TDD2 431 aaPredicted RBP12.81□□□□□ -0.36
PITPNB-210ENST00000493007 CLEC11AQ9Y240 323 aa12.81□□□□□ -0.36
PITPNB-210ENST00000493007 SPATA31A6Q5VVP1 1343 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms