RNA–Protein interactions for RNA: ENST00000492449.5

VPS8-225, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 1 (best)

Gene VPS8, Length 2,980 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-225ENST00000492449 ABCA10Q8WWZ4 1543 aa12.03□□□□□ -0.48
VPS8-225ENST00000492449 VGLL3A8MV65 326 aa12.03□□□□□ -0.48
VPS8-225ENST00000492449 CDK11BP21127 795 aaKnown RBP12.03□□□□□ -0.48
VPS8-225ENST00000492449 GABPB1Q06547 395 aaPredicted RBP12.03□□□□□ -0.48
VPS8-225ENST00000492449 FEZ1Q99689 392 aa12.03□□□□□ -0.48
VPS8-225ENST00000492449 RWDD1Q9H446 243 aaPredicted RBP12.02□□□□□ -0.49
VPS8-225ENST00000492449 GRIN2AQ12879 1464 aa12.02□□□□□ -0.49
VPS8-225ENST00000492449 MFAP1P55081 439 aaKnown RBP12.02□□□□□ -0.49
VPS8-225ENST00000492449 DNAJC2Q99543 621 aaKnown RBP12.02□□□□□ -0.49
VPS8-225ENST00000492449 ABCC10Q5T3U5 1492 aa12.01□□□□□ -0.49
VPS8-225ENST00000492449 RAD54L2Q9Y4B4 1467 aa12.01□□□□□ -0.49
VPS8-225ENST00000492449 BAG4O95429 457 aaKnown RBP12.01□□□□□ -0.49
VPS8-225ENST00000492449 IRX5P78411 483 aaPredicted RBP12.01□□□□□ -0.49
VPS8-225ENST00000492449 WDR43Q15061 677 aaKnown RBP eCLIP12.01□□□□□ -0.49
VPS8-225ENST00000492449 PCDHB15Q9Y5E8 787 aa12.01□□□□□ -0.49
VPS8-225ENST00000492449 ANKRD7Q92527 254 aa12.01□□□□□ -0.49
VPS8-225ENST00000492449 CGNQ9P2M7 1197 aaKnown RBP12.01□□□□□ -0.49
VPS8-225ENST00000492449 CC2D1BQ5T0F9 858 aaKnown RBP12□□□□□ -0.49
VPS8-225ENST00000492449 COG6Q9Y2V7 657 aa12□□□□□ -0.49
VPS8-225ENST00000492449 KIF3AQ9Y496 699 aa12□□□□□ -0.49
VPS8-225ENST00000492449 DNMBPQ6XZF7 1577 aa12□□□□□ -0.49
VPS8-225ENST00000492449 DNTTIP2Q5QJE6 756 aaKnown RBP12□□□□□ -0.49
VPS8-225ENST00000492449 SPINK5Q9NQ38 1064 aaPredicted RBP12□□□□□ -0.49
VPS8-225ENST00000492449 NPC1L1Q9UHC9 1359 aa12□□□□□ -0.49
VPS8-225ENST00000492449 YEATS2Q9ULM3 1422 aa11.99□□□□□ -0.49
VPS8-225ENST00000492449 TOPBP1Q92547 1522 aa11.99□□□□□ -0.49
VPS8-225ENST00000492449 PIBF1Q8WXW3 757 aa11.99□□□□□ -0.49
VPS8-225ENST00000492449 PLCD3Q8N3E9 789 aa11.99□□□□□ -0.49
VPS8-225ENST00000492449 PDCL2Q8N4E4 241 aa11.99□□□□□ -0.49
VPS8-225ENST00000492449 PANK1Q8TE04 598 aa11.99□□□□□ -0.49
VPS8-225ENST00000492449 PRAG1Q86YV5 1406 aa11.98□□□□□ -0.49
VPS8-225ENST00000492449 UHRF1BP1LA0JNW5 1464 aa11.98□□□□□ -0.49
VPS8-225ENST00000492449 SSFA2P28290 1259 aa11.98□□□□□ -0.49
VPS8-225ENST00000492449 PPP2R1AP30153 589 aa11.98□□□□□ -0.49
VPS8-225ENST00000492449 PRIM1P49642 420 aaKnown RBP11.98□□□□□ -0.49
VPS8-225ENST00000492449 LRSAM1Q6UWE0 723 aa11.98□□□□□ -0.49
VPS8-225ENST00000492449 BCL2L12Q9HB09 334 aa11.98□□□□□ -0.49
VPS8-225ENST00000492449 SPTLC3Q9NUV7 552 aa11.98□□□□□ -0.49
VPS8-225ENST00000492449 OGFRQ9NZT2 677 aa11.98□□□□□ -0.49
VPS8-225ENST00000492449 LMBRD1Q9NUN5 540 aa11.97□□□□□ -0.49
VPS8-225ENST00000492449 AK9Q5TCS8 1911 aa11.97□□□□□ -0.49
VPS8-225ENST00000492449 K7ELQ4 463 aaPredicted RBP11.97□□□□□ -0.49
VPS8-225ENST00000492449 DISP3Q9P2K9 1392 aa11.97□□□□□ -0.49
VPS8-225ENST00000492449 EIF2AK4Q9P2K8 1649 aaKnown RBP11.97□□□□□ -0.49
VPS8-225ENST00000492449 SYNMO15061 1565 aa11.97□□□□□ -0.49
VPS8-225ENST00000492449 CCDC66A2RUB6 948 aa11.97□□□□□ -0.49
VPS8-225ENST00000492449 TULP2O00295 520 aa11.97□□□□□ -0.49
VPS8-225ENST00000492449 KIF2CQ99661 725 aa11.97□□□□□ -0.49
VPS8-225ENST00000492449 ERBINQ96RT1 1412 aa11.96□□□□□ -0.49
VPS8-225ENST00000492449 CYP2E1P05181 493 aaPredicted RBP11.96□□□□□ -0.49
VPS8-225ENST00000492449 FKBP5Q13451 457 aaPredicted RBP11.96□□□□□ -0.49
VPS8-225ENST00000492449 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.96□□□□□ -0.49
VPS8-225ENST00000492449 ZBTB22O15209 634 aa11.96□□□□□ -0.5
VPS8-225ENST00000492449 CAVIN1Q6NZI2 390 aaKnown RBP11.96□□□□□ -0.5
VPS8-225ENST00000492449 AEBP2Q6ZN18 517 aaPredicted RBP11.96□□□□□ -0.5
VPS8-225ENST00000492449 ZNF771Q7L3S4 317 aaPredicted RBP11.96□□□□□ -0.5
VPS8-225ENST00000492449 ZFP91Q96JP5 570 aaPredicted RBP11.96□□□□□ -0.5
VPS8-225ENST00000492449 CTIFO43310 598 aaKnown RBP11.95□□□□□ -0.5
VPS8-225ENST00000492449 IRX3P78415 501 aaPredicted RBP11.95□□□□□ -0.5
VPS8-225ENST00000492449 PKD2Q13563 968 aa11.95□□□□□ -0.5
VPS8-225ENST00000492449 TESK2Q96S53 571 aa11.95□□□□□ -0.5
VPS8-225ENST00000492449 WDR62O43379 1518 aa11.95□□□□□ -0.5
VPS8-225ENST00000492449 FAM193AP78312 1265 aa11.95□□□□□ -0.5
VPS8-225ENST00000492449 RGS22Q8NE09 1264 aa11.95□□□□□ -0.5
VPS8-225ENST00000492449 CFAP74Q9C0B2 1584 aa11.95□□□□□ -0.5
VPS8-225ENST00000492449 WDR7Q9Y4E6 1490 aa11.95□□□□□ -0.5
VPS8-225ENST00000492449 SYCP1Q15431 976 aa11.94□□□□□ -0.5
VPS8-225ENST00000492449 TSPYL1Q9H0U9 437 aa11.94□□□□□ -0.5
VPS8-225ENST00000492449 RNF17Q9BXT8 1623 aaKnown RBP11.94□□□□□ -0.5
VPS8-225ENST00000492449 SLFN14P0C7P3 912 aa11.94□□□□□ -0.5
VPS8-225ENST00000492449 NOLC1Q14978 699 aaKnown RBP eCLIP11.94□□□□□ -0.5
VPS8-225ENST00000492449 JARID2Q92833 1246 aaPredicted RBP11.94□□□□□ -0.5
VPS8-225ENST00000492449 NUCB2P80303 420 aa11.94□□□□□ -0.5
VPS8-225ENST00000492449 HDAC1Q13547 482 aaPredicted RBP11.94□□□□□ -0.5
VPS8-225ENST00000492449 REREQ9P2R6 1566 aa11.93□□□□□ -0.5
VPS8-225ENST00000492449 MAGI2Q86UL8 1455 aa11.93□□□□□ -0.5
VPS8-225ENST00000492449 ASXL1Q8IXJ9 1541 aa11.93□□□□□ -0.5
VPS8-225ENST00000492449 SPDYE4A6NLX3 237 aa11.93□□□□□ -0.5
VPS8-225ENST00000492449 TSC1Q92574 1164 aa11.93□□□□□ -0.5
VPS8-225ENST00000492449 LAMC3Q9Y6N6 1575 aa11.93□□□□□ -0.5
VPS8-225ENST00000492449 TIGD1Q96MW7 591 aa11.93□□□□□ -0.5
VPS8-225ENST00000492449 PTPRGP23470 1445 aa11.93□□□□□ -0.5
VPS8-225ENST00000492449 KCNJ4P48050 445 aa11.92□□□□□ -0.5
VPS8-225ENST00000492449 RARSP54136 660 aaKnown RBP11.92□□□□□ -0.5
VPS8-225ENST00000492449 MYO5CQ9NQX4 1742 aa11.92□□□□□ -0.5
VPS8-225ENST00000492449 U2AF2P26368 475 aaKnown RBP eCLIP11.91□□□□□ -0.5
VPS8-225ENST00000492449 ERCC6Q03468 1493 aa11.91□□□□□ -0.5
VPS8-225ENST00000492449 CDK13Q14004 1512 aaKnown RBP11.91□□□□□ -0.5
VPS8-225ENST00000492449 URB2Q14146 1524 aaKnown RBP11.91□□□□□ -0.5
VPS8-225ENST00000492449 PBRM1Q86U86 1689 aa11.91□□□□□ -0.5
VPS8-225ENST00000492449 RLBP1P12271 317 aa11.91□□□□□ -0.5
VPS8-225ENST00000492449 CREBRFQ8IUR6 639 aa11.91□□□□□ -0.5
VPS8-225ENST00000492449 GAS2L2Q8NHY3 880 aa11.91□□□□□ -0.5
VPS8-225ENST00000492449 DIAPH3Q9NSV4 1193 aa11.91□□□□□ -0.5
VPS8-225ENST00000492449 KIF16BQ96L93 1317 aa11.91□□□□□ -0.5
VPS8-225ENST00000492449 CD2BP2O95400 341 aaKnown RBP11.91□□□□□ -0.5
VPS8-225ENST00000492449 MCTP1Q6DN14 999 aa11.91□□□□□ -0.5
VPS8-225ENST00000492449 GPT2Q8TD30 523 aa11.91□□□□□ -0.5
VPS8-225ENST00000492449 YY1AP1Q9H869 796 aa11.91□□□□□ -0.5
VPS8-225ENST00000492449 MYOM1P52179 1685 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms