RNA–Protein interactions for RNA: ENST00000490832.1

FNDC3B-211, Transcript of fibronectin type III domain containing 3B, humanhuman

TSL 4

Gene FNDC3B, Length 772 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-211ENST00000490832 MYSM1Q5VVJ2 828 aa13.77□□□□□ -0.21
FNDC3B-211ENST00000490832 USP46P62068 366 aa13.76□□□□□ -0.21
FNDC3B-211ENST00000490832 KMT5BQ4FZB7 885 aa13.76□□□□□ -0.21
FNDC3B-211ENST00000490832 PCMTD1Q96MG8 357 aaPredicted RBP13.75□□□□□ -0.21
FNDC3B-211ENST00000490832 TSR3Q9UJK0 312 aaKnown RBP13.75□□□□□ -0.21
FNDC3B-211ENST00000490832 HPS5Q9UPZ3 1129 aa13.75□□□□□ -0.21
FNDC3B-211ENST00000490832 ARHGEF11O15085 1522 aa13.74□□□□□ -0.21
FNDC3B-211ENST00000490832 TDRD9Q8NDG6 1382 aaKnown RBP13.74□□□□□ -0.21
FNDC3B-211ENST00000490832 PPP4CP60510 307 aa13.74□□□□□ -0.21
FNDC3B-211ENST00000490832 PRR14Q9BWN1 585 aa13.74□□□□□ -0.21
FNDC3B-211ENST00000490832 SUPT5HO00267 1087 aaKnown RBP13.73□□□□□ -0.21
FNDC3B-211ENST00000490832 THSD4Q6ZMP0 1018 aa13.73□□□□□ -0.21
FNDC3B-211ENST00000490832 CLK2P49760 499 aaKnown RBP13.72□□□□□ -0.21
FNDC3B-211ENST00000490832 KCTD12Q96CX2 325 aaKnown RBP13.72□□□□□ -0.21
FNDC3B-211ENST00000490832 GTF3C3Q9Y5Q9 886 aa13.72□□□□□ -0.21
FNDC3B-211ENST00000490832 FGD5Q6ZNL6 1462 aa13.72□□□□□ -0.21
FNDC3B-211ENST00000490832 SOGA1O94964 1423 aa13.72□□□□□ -0.21
FNDC3B-211ENST00000490832 CUX1P39880 1505 aa13.71□□□□□ -0.21
FNDC3B-211ENST00000490832 HOXA2O43364 376 aa13.7□□□□□ -0.22
FNDC3B-211ENST00000490832 GRIPAP1Q4V328 841 aa13.7□□□□□ -0.22
FNDC3B-211ENST00000490832 POLR3EQ9NVU0 708 aa13.7□□□□□ -0.22
FNDC3B-211ENST00000490832 MOXD2PA6NHM9 499 aa13.69□□□□□ -0.22
FNDC3B-211ENST00000490832 GJA5P36382 358 aa13.69□□□□□ -0.22
FNDC3B-211ENST00000490832 RIC3Q7Z5B4 369 aa13.69□□□□□ -0.22
FNDC3B-211ENST00000490832 SPTLC1O15269 473 aa13.68□□□□□ -0.22
FNDC3B-211ENST00000490832 ACTN4O43707 911 aaKnown RBP13.68□□□□□ -0.22
FNDC3B-211ENST00000490832 FUT2Q10981 343 aa13.68□□□□□ -0.22
FNDC3B-211ENST00000490832 RSBN1LQ6PCB5 846 aaPredicted RBP13.68□□□□□ -0.22
FNDC3B-211ENST00000490832 MYT1LQ9UL68 1186 aa13.68□□□□□ -0.22
FNDC3B-211ENST00000490832 ATP1B4Q9UN42 357 aaPredicted RBP13.67□□□□□ -0.22
FNDC3B-211ENST00000490832 SNAPC4Q5SXM2 1469 aa13.67□□□□□ -0.22
FNDC3B-211ENST00000490832 ATP6V1AP38606 617 aa13.66□□□□□ -0.22
FNDC3B-211ENST00000490832 TUSC1Q2TAM9 212 aa13.66□□□□□ -0.22
FNDC3B-211ENST00000490832 CYB5RLQ6IPT4 315 aa13.66□□□□□ -0.22
FNDC3B-211ENST00000490832 WBP1LQ9NX94 342 aa13.66□□□□□ -0.22
FNDC3B-211ENST00000490832 LIMD1Q9UGP4 676 aa13.66□□□□□ -0.22
FNDC3B-211ENST00000490832 NDUFV2P19404 249 aa13.65□□□□□ -0.22
FNDC3B-211ENST00000490832 PROCA1Q8NCQ7 364 aaPredicted RBP13.65□□□□□ -0.22
FNDC3B-211ENST00000490832 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.65□□□□□ -0.22
FNDC3B-211ENST00000490832 APLP1P51693 650 aa13.64□□□□□ -0.23
FNDC3B-211ENST00000490832 NYAP1Q6ZVC0 841 aa13.63□□□□□ -0.23
FNDC3B-211ENST00000490832 ARAP1Q96P48 1450 aa13.62□□□□□ -0.23
FNDC3B-211ENST00000490832 FDX1P10109 184 aa13.62□□□□□ -0.23
FNDC3B-211ENST00000490832 WDR97A6NE52 1622 aa13.61□□□□□ -0.23
FNDC3B-211ENST00000490832 GUCA2AQ02747 115 aa13.59□□□□□ -0.23
FNDC3B-211ENST00000490832 MORN1Q5T089 497 aa13.59□□□□□ -0.23
FNDC3B-211ENST00000490832 SPNS2Q8IVW8 549 aa13.59□□□□□ -0.23
FNDC3B-211ENST00000490832 CHMP7Q8WUX9 453 aaPredicted RBP13.59□□□□□ -0.23
FNDC3B-211ENST00000490832 HLA-CQ95604 372 aa13.59□□□□□ -0.23
FNDC3B-211ENST00000490832 PCDHB3Q9Y5E6 796 aa13.59□□□□□ -0.23
FNDC3B-211ENST00000490832 PTPN5P54829 565 aa13.58□□□□□ -0.24
FNDC3B-211ENST00000490832 CSPP1Q1MSJ5 1256 aa13.58□□□□□ -0.24
FNDC3B-211ENST00000490832 PRPF38BQ5VTL8 546 aaKnown RBP13.58□□□□□ -0.24
FNDC3B-211ENST00000490832 GRIN2BQ13224 1484 aa13.58□□□□□ -0.24
FNDC3B-211ENST00000490832 PUS10Q3MIT2 529 aaKnown RBP13.57□□□□□ -0.24
FNDC3B-211ENST00000490832 PCDHB15Q9Y5E8 787 aa13.57□□□□□ -0.24
FNDC3B-211ENST00000490832 CLASP1Q7Z460 1538 aa13.57□□□□□ -0.24
FNDC3B-211ENST00000490832 PBRM1Q86U86 1689 aa13.56□□□□□ -0.24
FNDC3B-211ENST00000490832 MAGI1Q96QZ7 1491 aaPredicted RBP13.56□□□□□ -0.24
FNDC3B-211ENST00000490832 RNF166Q96A37 237 aaPredicted RBP13.56□□□□□ -0.24
FNDC3B-211ENST00000490832 ZBTB3Q9H5J0 574 aa13.56□□□□□ -0.24
FNDC3B-211ENST00000490832 PCDHGC3Q9UN70 934 aa13.56□□□□□ -0.24
FNDC3B-211ENST00000490832 PPP2R2DQ66LE6 453 aa13.55□□□□□ -0.24
FNDC3B-211ENST00000490832 GAPVD1Q14C86 1478 aa13.55□□□□□ -0.24
FNDC3B-211ENST00000490832 LILRB3O75022 631 aa13.54□□□□□ -0.24
FNDC3B-211ENST00000490832 QPCTQ16769 361 aa13.54□□□□□ -0.24
FNDC3B-211ENST00000490832 SYNJ2O15056 1496 aa13.54□□□□□ -0.24
FNDC3B-211ENST00000490832 SYNJ1O43426 1573 aa13.54□□□□□ -0.24
FNDC3B-211ENST00000490832 NR1I2O75469 434 aa13.53□□□□□ -0.24
FNDC3B-211ENST00000490832 MTMR2Q13614 643 aa13.53□□□□□ -0.24
FNDC3B-211ENST00000490832 Q3C1V9 767 aa13.53□□□□□ -0.24
FNDC3B-211ENST00000490832 SLC27A5Q9Y2P5 690 aa13.53□□□□□ -0.24
FNDC3B-211ENST00000490832 NUTM2BA6NNL0 878 aaPredicted RBP13.52□□□□□ -0.25
FNDC3B-211ENST00000490832 NUTM2EB1AL46 878 aaPredicted RBP13.52□□□□□ -0.25
FNDC3B-211ENST00000490832 HRCP23327 699 aa13.52□□□□□ -0.25
FNDC3B-211ENST00000490832 NUTM2DQ5VT03 806 aaPredicted RBP13.52□□□□□ -0.25
FNDC3B-211ENST00000490832 NUTM2AQ8IVF1 878 aaPredicted RBP13.52□□□□□ -0.25
FNDC3B-211ENST00000490832 ABCA10Q8WWZ4 1543 aa13.52□□□□□ -0.25
FNDC3B-211ENST00000490832 ABCA5Q8WWZ7 1642 aa13.52□□□□□ -0.25
FNDC3B-211ENST00000490832 SPDYE5A6NIY4 337 aa13.51□□□□□ -0.25
FNDC3B-211ENST00000490832 RFC5P40937 340 aa13.51□□□□□ -0.25
FNDC3B-211ENST00000490832 BLOC1S3Q6QNY0 202 aa13.51□□□□□ -0.25
FNDC3B-211ENST00000490832 CABLES1Q8TDN4 633 aa13.51□□□□□ -0.25
FNDC3B-211ENST00000490832 C6orf229H3BNL8 230 aa13.5□□□□□ -0.25
FNDC3B-211ENST00000490832 FBXO31Q5XUX0 539 aaPredicted RBP13.49□□□□□ -0.25
FNDC3B-211ENST00000490832 HCSTQ9UBK5 93 aa13.49□□□□□ -0.25
FNDC3B-211ENST00000490832 SALL2Q9Y467 1007 aaPredicted RBP13.49□□□□□ -0.25
FNDC3B-211ENST00000490832 SCUBE3Q8IX30 993 aa13.48□□□□□ -0.25
FNDC3B-211ENST00000490832 COPS2P61201 443 aa13.47□□□□□ -0.25
FNDC3B-211ENST00000490832 RTL5Q5HYW3 569 aaPredicted RBP13.47□□□□□ -0.25
FNDC3B-211ENST00000490832 WRNQ14191 1432 aaPredicted RBP eCLIP13.47□□□□□ -0.25
FNDC3B-211ENST00000490832 TMEM259Q4ZIN3 620 aa13.46□□□□□ -0.25
FNDC3B-211ENST00000490832 ERICH6Q7L0X2 663 aa13.46□□□□□ -0.25
FNDC3B-211ENST00000490832 RETREG3Q86VR2 466 aa13.46□□□□□ -0.25
FNDC3B-211ENST00000490832 TOP2BQ02880 1626 aa13.46□□□□□ -0.26
FNDC3B-211ENST00000490832 FMNL1O95466 1100 aaPredicted RBP13.45□□□□□ -0.26
FNDC3B-211ENST00000490832 SYMPKQ92797 1274 aaKnown RBP13.45□□□□□ -0.26
FNDC3B-211ENST00000490832 MTRQ99707 1265 aa13.45□□□□□ -0.26
FNDC3B-211ENST00000490832 BIVM-ERCC5R4GMW8 1640 aa13.45□□□□□ -0.26
FNDC3B-211ENST00000490832 FLIIQ13045 1269 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms