RNA–Protein interactions for RNA: ENST00000488971.1

KDM3A-213, Transcript of lysine demethylase 3A, humanhuman

TSL 3

Gene KDM3A, Length 975 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3A-213ENST00000488971 PKD2L1Q9P0L9 805 aa7.88□□□□□ -1.15
KDM3A-213ENST00000488971 MAP2K5Q13163 448 aa7.87□□□□□ -1.15
KDM3A-213ENST00000488971 RNF19BQ6ZMZ0 732 aa7.87□□□□□ -1.15
KDM3A-213ENST00000488971 CYP4X1Q8N118 509 aa7.87□□□□□ -1.15
KDM3A-213ENST00000488971 ARXQ96QS3 562 aa7.87□□□□□ -1.15
KDM3A-213ENST00000488971 ST8SIA5O15466 376 aa7.86□□□□□ -1.15
KDM3A-213ENST00000488971 Q3C1V9 767 aa7.86□□□□□ -1.15
KDM3A-213ENST00000488971 MSS51Q4VC12 460 aa7.86□□□□□ -1.15
KDM3A-213ENST00000488971 POTECB2RU33 542 aa7.85□□□□□ -1.15
KDM3A-213ENST00000488971 CD46P15529 392 aa7.85□□□□□ -1.15
KDM3A-213ENST00000488971 IRF6O14896 467 aa7.84□□□□□ -1.15
KDM3A-213ENST00000488971 KDM4AO75164 1064 aa7.84□□□□□ -1.15
KDM3A-213ENST00000488971 MDM2Q00987 491 aaPredicted RBP7.84□□□□□ -1.15
KDM3A-213ENST00000488971 AAASQ9NRG9 546 aa7.84□□□□□ -1.15
KDM3A-213ENST00000488971 C14orf37Q86TY3 774 aa7.83□□□□□ -1.16
KDM3A-213ENST00000488971 TTC24A2A3L6 582 aaPredicted RBP7.82□□□□□ -1.16
KDM3A-213ENST00000488971 MINK1Q8N4C8 1332 aaPredicted RBP7.81□□□□□ -1.16
KDM3A-213ENST00000488971 USB1Q9BQ65 265 aaKnown RBP7.81□□□□□ -1.16
KDM3A-213ENST00000488971 TOR4AQ9NXH8 423 aa7.81□□□□□ -1.16
KDM3A-213ENST00000488971 ZMYND10O75800 440 aa7.8□□□□□ -1.16
KDM3A-213ENST00000488971 USP46P62068 366 aa7.8□□□□□ -1.16
KDM3A-213ENST00000488971 KRI1Q8N9T8 703 aaKnown RBP7.8□□□□□ -1.16
KDM3A-213ENST00000488971 SLC24A3Q9HC58 644 aa7.8□□□□□ -1.16
KDM3A-213ENST00000488971 AXIN1O15169 862 aa7.79□□□□□ -1.16
KDM3A-213ENST00000488971 MMP16P51512 607 aa7.79□□□□□ -1.16
KDM3A-213ENST00000488971 NEUROD2Q15784 382 aa7.79□□□□□ -1.16
KDM3A-213ENST00000488971 CCDC24Q8N4L8 307 aa7.79□□□□□ -1.16
KDM3A-213ENST00000488971 CCDC102AQ96A19 550 aa7.79□□□□□ -1.16
KDM3A-213ENST00000488971 TRIM32Q13049 653 aa7.78□□□□□ -1.16
KDM3A-213ENST00000488971 HLA-CQ95604 372 aa7.78□□□□□ -1.16
KDM3A-213ENST00000488971 WNT7AO00755 349 aa7.77□□□□□ -1.17
KDM3A-213ENST00000488971 AVPP01185 164 aa7.77□□□□□ -1.17
KDM3A-213ENST00000488971 CLCN1P35523 988 aa7.77□□□□□ -1.17
KDM3A-213ENST00000488971 CTC1Q2NKJ3 1217 aa7.77□□□□□ -1.17
KDM3A-213ENST00000488971 NUTM1Q86Y26 1132 aa7.77□□□□□ -1.17
KDM3A-213ENST00000488971 CRIPAKQ8N1N5 446 aa7.77□□□□□ -1.17
KDM3A-213ENST00000488971 GPCPD1Q9NPB8 672 aa7.77□□□□□ -1.17
KDM3A-213ENST00000488971 HOXA2O43364 376 aa7.76□□□□□ -1.17
KDM3A-213ENST00000488971 DXOO77932 396 aaKnown RBP7.76□□□□□ -1.17
KDM3A-213ENST00000488971 SNIP1Q8TAD8 396 aaKnown RBP7.76□□□□□ -1.17
KDM3A-213ENST00000488971 DACH1Q9UI36 760 aa7.76□□□□□ -1.17
KDM3A-213ENST00000488971 BARGINQ6ZT62 677 aa7.75□□□□□ -1.17
KDM3A-213ENST00000488971 C11orf95C9JLR9 678 aaPredicted RBP7.74□□□□□ -1.17
KDM3A-213ENST00000488971 GUCA2AQ02747 115 aa7.74□□□□□ -1.17
KDM3A-213ENST00000488971 MRGPRX2Q96LB1 330 aa7.74□□□□□ -1.17
KDM3A-213ENST00000488971 FAM217BQ9NTX9 383 aaPredicted RBP7.74□□□□□ -1.17
KDM3A-213ENST00000488971 GMPR2Q9P2T1 348 aaKnown RBP7.74□□□□□ -1.17
KDM3A-213ENST00000488971 REPIN1Q9BWE0 567 aaKnown RBP7.73□□□□□ -1.17
KDM3A-213ENST00000488971 SMPD1P17405 629 aa7.72□□□□□ -1.17
KDM3A-213ENST00000488971 JUNDP17535 347 aa7.72□□□□□ -1.17
KDM3A-213ENST00000488971 SMCPP49901 116 aaPredicted RBP7.72□□□□□ -1.17
KDM3A-213ENST00000488971 SYMPKQ92797 1274 aaKnown RBP7.72□□□□□ -1.17
KDM3A-213ENST00000488971 J3QL48 77 aa7.71□□□□□ -1.18
KDM3A-213ENST00000488971 RC3H1Q5TC82 1133 aaKnown RBP7.71□□□□□ -1.18
KDM3A-213ENST00000488971 TREML4Q6UXN2 200 aa7.71□□□□□ -1.18
KDM3A-213ENST00000488971 C6orf229H3BNL8 230 aa7.69□□□□□ -1.18
KDM3A-213ENST00000488971 FDX1P10109 184 aa7.69□□□□□ -1.18
KDM3A-213ENST00000488971 RETREG3Q86VR2 466 aa7.69□□□□□ -1.18
KDM3A-213ENST00000488971 HOMEZQ8IX15 550 aa7.69□□□□□ -1.18
KDM3A-213ENST00000488971 NUDT12Q9BQG2 462 aa7.69□□□□□ -1.18
KDM3A-213ENST00000488971 SSTR3P32745 418 aaPredicted RBP7.68□□□□□ -1.18
KDM3A-213ENST00000488971 WNT7BP56706 349 aa7.68□□□□□ -1.18
KDM3A-213ENST00000488971 SKOR1P84550 965 aa7.68□□□□□ -1.18
KDM3A-213ENST00000488971 HPS1Q92902 700 aa7.68□□□□□ -1.18
KDM3A-213ENST00000488971 AK7Q96M32 723 aa7.68□□□□□ -1.18
KDM3A-213ENST00000488971 ATP13A2Q9NQ11 1180 aa7.68□□□□□ -1.18
KDM3A-213ENST00000488971 TTLL12Q14166 644 aaPredicted RBP7.67□□□□□ -1.18
KDM3A-213ENST00000488971 WFS1O76024 890 aa7.66□□□□□ -1.18
KDM3A-213ENST00000488971 ALDH1A1P00352 501 aa7.66□□□□□ -1.18
KDM3A-213ENST00000488971 MS4A1P11836 297 aa7.65□□□□□ -1.18
KDM3A-213ENST00000488971 PTCRAQ6ISU1 281 aaPredicted RBP7.65□□□□□ -1.18
KDM3A-213ENST00000488971 EHBP1Q8NDI1 1231 aa7.65□□□□□ -1.18
KDM3A-213ENST00000488971 SPIRE2Q8WWL2 714 aa7.65□□□□□ -1.18
KDM3A-213ENST00000488971 SENP2Q9HC62 589 aa7.65□□□□□ -1.18
KDM3A-213ENST00000488971 PCDHGC3Q9UN70 934 aa7.65□□□□□ -1.18
KDM3A-213ENST00000488971 NDUFV2P19404 249 aa7.64□□□□□ -1.19
KDM3A-213ENST00000488971 CCNYL3P0C7X3 344 aa7.63□□□□□ -1.19
KDM3A-213ENST00000488971 SNRPBP14678 240 aaKnown RBP7.63□□□□□ -1.19
KDM3A-213ENST00000488971 WASF2Q9Y6W5 498 aa7.63□□□□□ -1.19
KDM3A-213ENST00000488971 MOXD2PA6NHM9 499 aa7.62□□□□□ -1.19
KDM3A-213ENST00000488971 LCE2AQ5TA79 106 aaPredicted RBP7.62□□□□□ -1.19
KDM3A-213ENST00000488971 TRIM47Q96LD4 638 aa7.62□□□□□ -1.19
KDM3A-213ENST00000488971 PRR7Q8TB68 274 aa7.61□□□□□ -1.19
KDM3A-213ENST00000488971 KIFC2Q96AC6 838 aa7.61□□□□□ -1.19
KDM3A-213ENST00000488971 GPBP1L1Q9HC44 474 aaPredicted RBP7.61□□□□□ -1.19
KDM3A-213ENST00000488971 PTPRNQ16849 979 aa7.6□□□□□ -1.19
KDM3A-213ENST00000488971 LINC01559Q495D7 138 aa7.6□□□□□ -1.19
KDM3A-213ENST00000488971 GIGYF2Q6Y7W6 1299 aaKnown RBP7.6□□□□□ -1.19
KDM3A-213ENST00000488971 KDM4CQ9H3R0 1056 aa7.6□□□□□ -1.19
KDM3A-213ENST00000488971 TRIM66O15016 1216 aa7.59□□□□□ -1.19
KDM3A-213ENST00000488971 SIAH2O43255 324 aa7.59□□□□□ -1.19
KDM3A-213ENST00000488971 SH3BP2P78314 561 aa7.59□□□□□ -1.19
KDM3A-213ENST00000488971 NFX1Q12986 1120 aaKnown RBP7.59□□□□□ -1.19
KDM3A-213ENST00000488971 MTMR2Q13614 643 aa7.59□□□□□ -1.19
KDM3A-213ENST00000488971 AMHR2Q16671 573 aa7.59□□□□□ -1.19
KDM3A-213ENST00000488971 BEGAINQ9BUH8 593 aa7.59□□□□□ -1.19
KDM3A-213ENST00000488971 UNC93B1Q9H1C4 597 aa7.59□□□□□ -1.19
KDM3A-213ENST00000488971 EVA1BQ9NVM1 165 aa7.59□□□□□ -1.19
KDM3A-213ENST00000488971 SPDYE5A6NIY4 337 aa7.58□□□□□ -1.2
KDM3A-213ENST00000488971 SUPT5HO00267 1087 aaKnown RBP7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms