RNA–Protein interactions for RNA: ENST00000488639.6

CEACAM1-212, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, humanhuman

TSL 3

Gene CEACAM1, Length 429 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM1-212ENST00000488639 XIRP1Q702N8 1843 aaKnown RBP16.66■□□□□ 0.26
CEACAM1-212ENST00000488639 EIF3AQ14152 1382 aaKnown RBP16.65■□□□□ 0.26
CEACAM1-212ENST00000488639 PROSER2Q86WR7 435 aaPredicted RBP16.65■□□□□ 0.26
CEACAM1-212ENST00000488639 NBPF1Q3BBV0 1214 aa16.64■□□□□ 0.25
CEACAM1-212ENST00000488639 ROBO2Q9HCK4 1378 aa16.64■□□□□ 0.25
CEACAM1-212ENST00000488639 ZEB1P37275 1124 aaPredicted RBP16.63■□□□□ 0.25
CEACAM1-212ENST00000488639 TMEM94Q12767 1356 aa16.63■□□□□ 0.25
CEACAM1-212ENST00000488639 DCCP43146 1447 aa16.62■□□□□ 0.25
CEACAM1-212ENST00000488639 STK26Q9P289 416 aa16.62■□□□□ 0.25
CEACAM1-212ENST00000488639 CARD11Q9BXL7 1154 aa16.61■□□□□ 0.25
CEACAM1-212ENST00000488639 FOXD4L1Q9NU39 408 aa16.61■□□□□ 0.25
CEACAM1-212ENST00000488639 ADGRL3Q9HAR2 1447 aa16.61■□□□□ 0.25
CEACAM1-212ENST00000488639 NALCNQ8IZF0 1738 aa16.6■□□□□ 0.25
CEACAM1-212ENST00000488639 CERKQ8TCT0 537 aa16.6■□□□□ 0.25
CEACAM1-212ENST00000488639 TRAK1Q9UPV9 953 aa16.6■□□□□ 0.25
CEACAM1-212ENST00000488639 MSH6P52701 1360 aa16.6■□□□□ 0.25
CEACAM1-212ENST00000488639 ADGRB2O60241 1585 aa16.6■□□□□ 0.25
CEACAM1-212ENST00000488639 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.59■□□□□ 0.25
CEACAM1-212ENST00000488639 SLC24A1O60721 1099 aa16.58■□□□□ 0.24
CEACAM1-212ENST00000488639 PRAM1Q96QH2 718 aa16.58■□□□□ 0.24
CEACAM1-212ENST00000488639 C19orf44Q9H6X5 657 aa16.58■□□□□ 0.24
CEACAM1-212ENST00000488639 POGKQ9P215 609 aa16.58■□□□□ 0.24
CEACAM1-212ENST00000488639 CDC42BPGQ6DT37 1551 aa16.58■□□□□ 0.24
CEACAM1-212ENST00000488639 QRICH2Q9H0J4 1663 aa16.58■□□□□ 0.24
CEACAM1-212ENST00000488639 SBNO2Q9Y2G9 1366 aa16.57■□□□□ 0.24
CEACAM1-212ENST00000488639 CENPJQ9HC77 1338 aaPredicted RBP16.56■□□□□ 0.24
CEACAM1-212ENST00000488639 MYCNP04198 464 aaPredicted RBP16.56■□□□□ 0.24
CEACAM1-212ENST00000488639 WAPLQ7Z5K2 1190 aa16.55■□□□□ 0.24
CEACAM1-212ENST00000488639 C14orf37Q86TY3 774 aa16.55■□□□□ 0.24
CEACAM1-212ENST00000488639 CADPS2Q86UW7 1296 aa16.55■□□□□ 0.24
CEACAM1-212ENST00000488639 SAMD1Q6SPF0 538 aaPredicted RBP16.54■□□□□ 0.24
CEACAM1-212ENST00000488639 USP47Q96K76 1375 aa16.53■□□□□ 0.24
CEACAM1-212ENST00000488639 PLEKHH1Q9ULM0 1364 aa16.53■□□□□ 0.24
CEACAM1-212ENST00000488639 CAPN15O75808 1086 aa16.52■□□□□ 0.24
CEACAM1-212ENST00000488639 ATF3P18847 181 aa16.52■□□□□ 0.24
CEACAM1-212ENST00000488639 FMN2Q9NZ56 1722 aa16.51■□□□□ 0.23
CEACAM1-212ENST00000488639 TOM1O60784 492 aa16.51■□□□□ 0.23
CEACAM1-212ENST00000488639 EIF4G2P78344 907 aaKnown RBP eCLIP16.49■□□□□ 0.23
CEACAM1-212ENST00000488639 RBM33Q96EV2 1170 aaKnown RBP16.49■□□□□ 0.23
CEACAM1-212ENST00000488639 ANKARQ7Z5J8 1434 aa16.48■□□□□ 0.23
CEACAM1-212ENST00000488639 TULP4Q9NRJ4 1543 aa16.47■□□□□ 0.23
CEACAM1-212ENST00000488639 SAFB2Q14151 953 aaKnown RBP eCLIP16.47■□□□□ 0.23
CEACAM1-212ENST00000488639 SPINK5Q9NQ38 1064 aaPredicted RBP16.47■□□□□ 0.23
CEACAM1-212ENST00000488639 ITSN1Q15811 1721 aa16.47■□□□□ 0.23
CEACAM1-212ENST00000488639 EVC2Q86UK5 1308 aa16.46■□□□□ 0.23
CEACAM1-212ENST00000488639 MINK1Q8N4C8 1332 aaPredicted RBP16.46■□□□□ 0.23
CEACAM1-212ENST00000488639 MST1RQ04912 1400 aa16.46■□□□□ 0.23
CEACAM1-212ENST00000488639 ST20-MTHFSA0A0A6YYL1 179 aa16.46■□□□□ 0.23
CEACAM1-212ENST00000488639 WASLO00401 505 aaPredicted RBP16.46■□□□□ 0.23
CEACAM1-212ENST00000488639 PUS7Q96PZ0 661 aaKnown RBP16.45■□□□□ 0.22
CEACAM1-212ENST00000488639 SLAIN2Q9P270 581 aa16.45■□□□□ 0.22
CEACAM1-212ENST00000488639 C1orf167Q5SNV9 1468 aa16.44■□□□□ 0.22
CEACAM1-212ENST00000488639 UBAP1LF5GYI3 381 aa16.44■□□□□ 0.22
CEACAM1-212ENST00000488639 KIF1AQ12756 1690 aa16.43■□□□□ 0.22
CEACAM1-212ENST00000488639 TESK2Q96S53 571 aa16.43■□□□□ 0.22
CEACAM1-212ENST00000488639 HIRIP3Q9BW71 556 aaPredicted RBP16.43■□□□□ 0.22
CEACAM1-212ENST00000488639 USP32Q8NFA0 1604 aa16.42■□□□□ 0.22
CEACAM1-212ENST00000488639 CDCA8Q53HL2 280 aa16.42■□□□□ 0.22
CEACAM1-212ENST00000488639 TOPAZ1Q8N9V7 1692 aa16.42■□□□□ 0.22
CEACAM1-212ENST00000488639 ROBO1Q9Y6N7 1651 aa16.41■□□□□ 0.22
CEACAM1-212ENST00000488639 TMF1P82094 1093 aa16.41■□□□□ 0.22
CEACAM1-212ENST00000488639 CDK19Q9BWU1 502 aa16.41■□□□□ 0.22
CEACAM1-212ENST00000488639 ATP7BP35670 1465 aa16.41■□□□□ 0.22
CEACAM1-212ENST00000488639 RGPD8O14715 1765 aaPredicted RBP16.41■□□□□ 0.22
CEACAM1-212ENST00000488639 ATAD2Q6PL18 1390 aa16.4■□□□□ 0.22
CEACAM1-212ENST00000488639 HSPA5P11021 654 aaKnown RBP16.4■□□□□ 0.22
CEACAM1-212ENST00000488639 FBXO41Q8TF61 875 aa16.39■□□□□ 0.21
CEACAM1-212ENST00000488639 ZBTB22O15209 634 aa16.38■□□□□ 0.21
CEACAM1-212ENST00000488639 SRPK2P78362 688 aaKnown RBP16.38■□□□□ 0.21
CEACAM1-212ENST00000488639 NINLQ9Y2I6 1382 aa16.38■□□□□ 0.21
CEACAM1-212ENST00000488639 NHSL1Q5SYE7 1610 aa16.37■□□□□ 0.21
CEACAM1-212ENST00000488639 CCDC61Q9Y6R9 512 aa16.37■□□□□ 0.21
CEACAM1-212ENST00000488639 AHDC1Q5TGY3 1603 aaPredicted RBP16.37■□□□□ 0.21
CEACAM1-212ENST00000488639 NUDT16Q96DE0 195 aaKnown RBP16.36■□□□□ 0.21
CEACAM1-212ENST00000488639 ESCO1Q5FWF5 840 aa16.35■□□□□ 0.21
CEACAM1-212ENST00000488639 BRINP3Q76B58 766 aa16.35■□□□□ 0.21
CEACAM1-212ENST00000488639 ZNF219Q9P2Y4 722 aaPredicted RBP16.35■□□□□ 0.21
CEACAM1-212ENST00000488639 PRR36Q9H6K5 1346 aa16.34■□□□□ 0.21
CEACAM1-212ENST00000488639 PLEKHG3A1L390 1219 aa16.33■□□□□ 0.2
CEACAM1-212ENST00000488639 PIP4K2BP78356 416 aa16.33■□□□□ 0.2
CEACAM1-212ENST00000488639 CABP2Q9NPB3 220 aa16.33■□□□□ 0.2
CEACAM1-212ENST00000488639 PHF8Q9UPP1 1060 aa16.33■□□□□ 0.2
CEACAM1-212ENST00000488639 NPHP3Q7Z494 1330 aa16.33■□□□□ 0.2
CEACAM1-212ENST00000488639 DISP3Q9P2K9 1392 aa16.33■□□□□ 0.2
CEACAM1-212ENST00000488639 PPIP5K1Q6PFW1 1433 aa16.33■□□□□ 0.2
CEACAM1-212ENST00000488639 NUTM2FA1L443 756 aa16.32■□□□□ 0.2
CEACAM1-212ENST00000488639 POLR3AO14802 1390 aaPredicted RBP16.32■□□□□ 0.2
CEACAM1-212ENST00000488639 PHLPP1O60346 1717 aa16.31■□□□□ 0.2
CEACAM1-212ENST00000488639 BRD4O60885 1362 aaPredicted RBP16.31■□□□□ 0.2
CEACAM1-212ENST00000488639 ORAI2Q96SN7 254 aa16.31■□□□□ 0.2
CEACAM1-212ENST00000488639 AKAP12Q02952 1782 aa16.31■□□□□ 0.2
CEACAM1-212ENST00000488639 MYOM1P52179 1685 aa16.28■□□□□ 0.2
CEACAM1-212ENST00000488639 COL16A1Q07092 1604 aaPredicted RBP16.28■□□□□ 0.2
CEACAM1-212ENST00000488639 ZNF692Q9BU19 519 aaPredicted RBP16.28■□□□□ 0.2
CEACAM1-212ENST00000488639 PXDNQ92626 1479 aa16.28■□□□□ 0.2
CEACAM1-212ENST00000488639 SOS2Q07890 1332 aaPredicted RBP16.27■□□□□ 0.2
CEACAM1-212ENST00000488639 PSME1Q06323 249 aa16.27■□□□□ 0.2
CEACAM1-212ENST00000488639 NGDNQ8NEJ9 315 aaKnown RBP16.27■□□□□ 0.2
CEACAM1-212ENST00000488639 CABP1Q9NZU7 370 aa16.27■□□□□ 0.2
CEACAM1-212ENST00000488639 MON2Q7Z3U7 1717 aa16.27■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms