RNA–Protein interactions for RNA: ENST00000488494.5

ITGB1-215, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-215ENST00000488494 DHX57Q6P158 1386 aaKnown RBP25.93■■□□□ 1.74
ITGB1-215ENST00000488494 LRP6O75581 1613 aa25.92■■□□□ 1.74
ITGB1-215ENST00000488494 KDM2AQ9Y2K7 1162 aa25.92■■□□□ 1.74
ITGB1-215ENST00000488494 DDX17Q92841 729 aaKnown RBP25.91■■□□□ 1.74
ITGB1-215ENST00000488494 SPATA31A6Q5VVP1 1343 aa25.89■■□□□ 1.74
ITGB1-215ENST00000488494 DLC1Q96QB1 1528 aa25.89■■□□□ 1.74
ITGB1-215ENST00000488494 FMN2Q9NZ56 1722 aa25.89■■□□□ 1.74
ITGB1-215ENST00000488494 ORAI2Q96SN7 254 aa25.88■■□□□ 1.73
ITGB1-215ENST00000488494 SOCS7O14512 581 aa25.87■■□□□ 1.73
ITGB1-215ENST00000488494 RGS17Q9UGC6 210 aaPredicted RBP25.86■■□□□ 1.73
ITGB1-215ENST00000488494 SIRT1Q96EB6 747 aa25.84■■□□□ 1.73
ITGB1-215ENST00000488494 STAC3Q96MF2 364 aa25.83■■□□□ 1.73
ITGB1-215ENST00000488494 PRAM1Q96QH2 718 aa25.83■■□□□ 1.73
ITGB1-215ENST00000488494 PNPLA6Q8IY17 1366 aa25.82■■□□□ 1.72
ITGB1-215ENST00000488494 NUTM2FA1L443 756 aa25.82■■□□□ 1.72
ITGB1-215ENST00000488494 ADGRB2O60241 1585 aa25.82■■□□□ 1.72
ITGB1-215ENST00000488494 SAFB2Q14151 953 aaKnown RBP eCLIP25.81■■□□□ 1.72
ITGB1-215ENST00000488494 ESCO1Q5FWF5 840 aa25.81■■□□□ 1.72
ITGB1-215ENST00000488494 LRRC59Q96AG4 307 aaKnown RBP25.81■■□□□ 1.72
ITGB1-215ENST00000488494 MEX3CQ5U5Q3 659 aaKnown RBP25.8■■□□□ 1.72
ITGB1-215ENST00000488494 KIF1AQ12756 1690 aa25.8■■□□□ 1.72
ITGB1-215ENST00000488494 ARHGEF28Q8N1W1 1705 aaKnown RBP25.78■■□□□ 1.72
ITGB1-215ENST00000488494 POGKQ9P215 609 aa25.78■■□□□ 1.72
ITGB1-215ENST00000488494 TRAK1Q9UPV9 953 aa25.78■■□□□ 1.72
ITGB1-215ENST00000488494 SOS2Q07890 1332 aaPredicted RBP25.78■■□□□ 1.72
ITGB1-215ENST00000488494 PXDNQ92626 1479 aa25.78■■□□□ 1.72
ITGB1-215ENST00000488494 KIAA1210Q9ULL0 1709 aa25.77■■□□□ 1.72
ITGB1-215ENST00000488494 NUTM2BA6NNL0 878 aaPredicted RBP25.77■■□□□ 1.72
ITGB1-215ENST00000488494 NUTM2EB1AL46 878 aaPredicted RBP25.77■■□□□ 1.72
ITGB1-215ENST00000488494 NUTM2AQ8IVF1 878 aaPredicted RBP25.77■■□□□ 1.72
ITGB1-215ENST00000488494 NPHP3Q7Z494 1330 aa25.76■■□□□ 1.71
ITGB1-215ENST00000488494 POTEAQ6S8J7 498 aa25.74■■□□□ 1.71
ITGB1-215ENST00000488494 USP32Q8NFA0 1604 aa25.73■■□□□ 1.71
ITGB1-215ENST00000488494 COL22A1Q8NFW1 1626 aaPredicted RBP25.73■■□□□ 1.71
ITGB1-215ENST00000488494 RGPD8O14715 1765 aaPredicted RBP25.72■■□□□ 1.71
ITGB1-215ENST00000488494 FOXO3O43524 673 aa25.71■■□□□ 1.71
ITGB1-215ENST00000488494 XPCQ01831 940 aaPredicted RBP25.71■■□□□ 1.71
ITGB1-215ENST00000488494 ANKARQ7Z5J8 1434 aa25.7■■□□□ 1.7
ITGB1-215ENST00000488494 MINK1Q8N4C8 1332 aaPredicted RBP25.69■■□□□ 1.7
ITGB1-215ENST00000488494 HIRIP3Q9BW71 556 aaPredicted RBP25.69■■□□□ 1.7
ITGB1-215ENST00000488494 SIN3AQ96ST3 1273 aa25.68■■□□□ 1.7
ITGB1-215ENST00000488494 TULP4Q9NRJ4 1543 aa25.68■■□□□ 1.7
ITGB1-215ENST00000488494 TRIM26Q12899 539 aaPredicted RBP25.66■■□□□ 1.7
ITGB1-215ENST00000488494 EIF3AQ14152 1382 aaKnown RBP25.65■■□□□ 1.7
ITGB1-215ENST00000488494 L3MBTL2Q969R5 705 aa25.64■■□□□ 1.7
ITGB1-215ENST00000488494 PHF8Q9UPP1 1060 aa25.64■■□□□ 1.7
ITGB1-215ENST00000488494 NEUROD1Q13562 356 aa25.63■■□□□ 1.69
ITGB1-215ENST00000488494 ZNF772Q68DY9 489 aaPredicted RBP25.63■■□□□ 1.69
ITGB1-215ENST00000488494 AFF2P51816 1311 aa25.63■■□□□ 1.69
ITGB1-215ENST00000488494 ADAMTS2O95450 1211 aa25.62■■□□□ 1.69
ITGB1-215ENST00000488494 C8orf37Q96NL8 207 aa25.62■■□□□ 1.69
ITGB1-215ENST00000488494 NBPF1Q3BBV0 1214 aa25.61■■□□□ 1.69
ITGB1-215ENST00000488494 TRPM1Q7Z4N2 1603 aa25.6■■□□□ 1.69
ITGB1-215ENST00000488494 PRR36Q9H6K5 1346 aa25.6■■□□□ 1.69
ITGB1-215ENST00000488494 WASLO00401 505 aaPredicted RBP25.59■■□□□ 1.69
ITGB1-215ENST00000488494 TNS3Q68CZ2 1445 aa25.59■■□□□ 1.69
ITGB1-215ENST00000488494 ATP7BP35670 1465 aa25.58■■□□□ 1.69
ITGB1-215ENST00000488494 SPATA31A3Q5VYP0 1347 aa25.58■■□□□ 1.69
ITGB1-215ENST00000488494 ITSN1Q15811 1721 aa25.57■■□□□ 1.68
ITGB1-215ENST00000488494 KRT28Q7Z3Y7 464 aa25.57■■□□□ 1.68
ITGB1-215ENST00000488494 PMFBP1Q8TBY8 1022 aa25.56■■□□□ 1.68
ITGB1-215ENST00000488494 MARF1Q9Y4F3 1742 aaKnown RBP25.56■■□□□ 1.68
ITGB1-215ENST00000488494 QRICH2Q9H0J4 1663 aa25.55■■□□□ 1.68
ITGB1-215ENST00000488494 TRPM3Q9HCF6 1732 aaPredicted RBP25.54■■□□□ 1.68
ITGB1-215ENST00000488494 TOPAZ1Q8N9V7 1692 aa25.54■■□□□ 1.68
ITGB1-215ENST00000488494 NGLY1Q96IV0 654 aa25.53■■□□□ 1.68
ITGB1-215ENST00000488494 SBNO1A3KN83 1393 aa25.53■■□□□ 1.68
ITGB1-215ENST00000488494 ABCA3Q99758 1704 aa25.52■■□□□ 1.68
ITGB1-215ENST00000488494 PSME1Q06323 249 aa25.52■■□□□ 1.68
ITGB1-215ENST00000488494 CENPJQ9HC77 1338 aaPredicted RBP25.5■■□□□ 1.67
ITGB1-215ENST00000488494 ARHGEF10O15013 1369 aa25.49■■□□□ 1.67
ITGB1-215ENST00000488494 ROCK2O75116 1388 aaKnown RBP25.49■■□□□ 1.67
ITGB1-215ENST00000488494 GPRASP1Q5JY77 1395 aa25.48■■□□□ 1.67
ITGB1-215ENST00000488494 ALS2Q96Q42 1657 aa25.48■■□□□ 1.67
ITGB1-215ENST00000488494 RXRBP28702 533 aa25.47■■□□□ 1.67
ITGB1-215ENST00000488494 CDK19Q9BWU1 502 aa25.47■■□□□ 1.67
ITGB1-215ENST00000488494 CDK12Q9NYV4 1490 aaPredicted RBP25.47■■□□□ 1.67
ITGB1-215ENST00000488494 TONSLQ96HA7 1378 aa25.46■■□□□ 1.67
ITGB1-215ENST00000488494 LMOD2Q6P5Q4 547 aa25.46■■□□□ 1.67
ITGB1-215ENST00000488494 NUDT16Q96DE0 195 aaKnown RBP25.46■■□□□ 1.67
ITGB1-215ENST00000488494 USP21Q9UK80 565 aa25.45■■□□□ 1.66
ITGB1-215ENST00000488494 PLEKHG5O94827 1062 aa25.44■■□□□ 1.66
ITGB1-215ENST00000488494 NGDNQ8NEJ9 315 aaKnown RBP25.44■■□□□ 1.66
ITGB1-215ENST00000488494 FNBP4Q8N3X1 1017 aaPredicted RBP25.43■■□□□ 1.66
ITGB1-215ENST00000488494 QTRT2Q9H974 415 aaKnown RBP25.43■■□□□ 1.66
ITGB1-215ENST00000488494 RGS12O14924 1447 aa25.43■■□□□ 1.66
ITGB1-215ENST00000488494 HAP1P54257 671 aaPredicted RBP25.42■■□□□ 1.66
ITGB1-215ENST00000488494 NBPF8Q3BBV2 869 aa25.42■■□□□ 1.66
ITGB1-215ENST00000488494 CABLES1Q8TDN4 633 aa25.42■■□□□ 1.66
ITGB1-215ENST00000488494 ATRNO75882 1429 aa25.42■■□□□ 1.66
ITGB1-215ENST00000488494 BCL9LQ86UU0 1499 aa25.4■■□□□ 1.66
ITGB1-215ENST00000488494 TNKS1BP1Q9C0C2 1729 aaKnown RBP25.4■■□□□ 1.66
ITGB1-215ENST00000488494 RALGAPBQ86X10 1494 aa25.4■■□□□ 1.66
ITGB1-215ENST00000488494 PLCH1Q4KWH8 1693 aa25.39■■□□□ 1.66
ITGB1-215ENST00000488494 RBM6P78332 1123 aaKnown RBP25.39■■□□□ 1.66
ITGB1-215ENST00000488494 SRPK2P78362 688 aaKnown RBP25.39■■□□□ 1.66
ITGB1-215ENST00000488494 CRYBG1Q9Y4K1 1723 aa25.39■■□□□ 1.65
ITGB1-215ENST00000488494 TRPC5Q9UL62 973 aaPredicted RBP25.38■■□□□ 1.65
ITGB1-215ENST00000488494 POLR3AO14802 1390 aaPredicted RBP25.38■■□□□ 1.65
ITGB1-215ENST00000488494 PPIP5K1Q6PFW1 1433 aa25.37■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms