RNA–Protein interactions for RNA: ENST00000488185.2

PKD1-221, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 737 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-221ENST00000488185 NHSL1Q5SYE7 1610 aa29.84■■■□□ 2.37
PKD1-221ENST00000488185 ADGRB1O14514 1584 aa29.83■■■□□ 2.37
PKD1-221ENST00000488185 DLC1Q96QB1 1528 aa29.81■■■□□ 2.36
PKD1-221ENST00000488185 PLEKHH1Q9ULM0 1364 aa29.81■■■□□ 2.36
PKD1-221ENST00000488185 LRRC59Q96AG4 307 aaKnown RBP29.8■■■□□ 2.36
PKD1-221ENST00000488185 KDM2AQ9Y2K7 1162 aa29.8■■■□□ 2.36
PKD1-221ENST00000488185 SHPRHQ149N8 1683 aa29.79■■■□□ 2.36
PKD1-221ENST00000488185 SOCS7O14512 581 aa29.78■■■□□ 2.36
PKD1-221ENST00000488185 ORAI2Q96SN7 254 aa29.78■■■□□ 2.36
PKD1-221ENST00000488185 RGS17Q9UGC6 210 aaPredicted RBP29.78■■■□□ 2.36
PKD1-221ENST00000488185 SOS2Q07890 1332 aaPredicted RBP29.76■■■□□ 2.36
PKD1-221ENST00000488185 PRAM1Q96QH2 718 aa29.72■■■□□ 2.35
PKD1-221ENST00000488185 DDX17Q92841 729 aaKnown RBP29.7■■■□□ 2.35
PKD1-221ENST00000488185 ESCO1Q5FWF5 840 aa29.69■■■□□ 2.34
PKD1-221ENST00000488185 LRP6O75581 1613 aa29.68■■■□□ 2.34
PKD1-221ENST00000488185 NPHP3Q7Z494 1330 aa29.68■■■□□ 2.34
PKD1-221ENST00000488185 PNPLA6Q8IY17 1366 aa29.67■■■□□ 2.34
PKD1-221ENST00000488185 TRIM26Q12899 539 aaPredicted RBP29.67■■■□□ 2.34
PKD1-221ENST00000488185 FMN2Q9NZ56 1722 aa29.67■■■□□ 2.34
PKD1-221ENST00000488185 POGKQ9P215 609 aa29.66■■■□□ 2.34
PKD1-221ENST00000488185 TRAK1Q9UPV9 953 aa29.65■■■□□ 2.34
PKD1-221ENST00000488185 KIAA1210Q9ULL0 1709 aa29.64■■■□□ 2.34
PKD1-221ENST00000488185 ADGRB2O60241 1585 aa29.64■■■□□ 2.33
PKD1-221ENST00000488185 PXDNQ92626 1479 aa29.61■■■□□ 2.33
PKD1-221ENST00000488185 ANKARQ7Z5J8 1434 aa29.6■■■□□ 2.33
PKD1-221ENST00000488185 FOXO3O43524 673 aa29.59■■■□□ 2.33
PKD1-221ENST00000488185 POTEAQ6S8J7 498 aa29.59■■■□□ 2.33
PKD1-221ENST00000488185 NUTM2FA1L443 756 aa29.58■■■□□ 2.33
PKD1-221ENST00000488185 SAFB2Q14151 953 aaKnown RBP eCLIP29.58■■■□□ 2.33
PKD1-221ENST00000488185 L3MBTL2Q969R5 705 aa29.58■■■□□ 2.33
PKD1-221ENST00000488185 KIF1AQ12756 1690 aa29.56■■■□□ 2.32
PKD1-221ENST00000488185 MEX3CQ5U5Q3 659 aaKnown RBP29.56■■■□□ 2.32
PKD1-221ENST00000488185 SIN3AQ96ST3 1273 aa29.56■■■□□ 2.32
PKD1-221ENST00000488185 EIF3AQ14152 1382 aaKnown RBP29.55■■■□□ 2.32
PKD1-221ENST00000488185 ZNF772Q68DY9 489 aaPredicted RBP29.54■■■□□ 2.32
PKD1-221ENST00000488185 PHF8Q9UPP1 1060 aa29.54■■■□□ 2.32
PKD1-221ENST00000488185 COL22A1Q8NFW1 1626 aaPredicted RBP29.53■■■□□ 2.32
PKD1-221ENST00000488185 NUTM2BA6NNL0 878 aaPredicted RBP29.53■■■□□ 2.32
PKD1-221ENST00000488185 NUTM2EB1AL46 878 aaPredicted RBP29.53■■■□□ 2.32
PKD1-221ENST00000488185 NUTM2AQ8IVF1 878 aaPredicted RBP29.53■■■□□ 2.32
PKD1-221ENST00000488185 WASLO00401 505 aaPredicted RBP29.52■■■□□ 2.32
PKD1-221ENST00000488185 NBPF1Q3BBV0 1214 aa29.51■■■□□ 2.31
PKD1-221ENST00000488185 ARHGEF28Q8N1W1 1705 aaKnown RBP29.51■■■□□ 2.31
PKD1-221ENST00000488185 MINK1Q8N4C8 1332 aaPredicted RBP29.49■■■□□ 2.31
PKD1-221ENST00000488185 USP32Q8NFA0 1604 aa29.48■■■□□ 2.31
PKD1-221ENST00000488185 SPATA31A3Q5VYP0 1347 aa29.47■■■□□ 2.31
PKD1-221ENST00000488185 TULP4Q9NRJ4 1543 aa29.47■■■□□ 2.31
PKD1-221ENST00000488185 KRT28Q7Z3Y7 464 aa29.47■■■□□ 2.31
PKD1-221ENST00000488185 HIRIP3Q9BW71 556 aaPredicted RBP29.47■■■□□ 2.31
PKD1-221ENST00000488185 PSME1Q06323 249 aa29.46■■■□□ 2.31
PKD1-221ENST00000488185 XPCQ01831 940 aaPredicted RBP29.45■■■□□ 2.31
PKD1-221ENST00000488185 NEUROD1Q13562 356 aa29.45■■■□□ 2.31
PKD1-221ENST00000488185 PRR36Q9H6K5 1346 aa29.45■■■□□ 2.3
PKD1-221ENST00000488185 SBNO1A3KN83 1393 aa29.44■■■□□ 2.3
PKD1-221ENST00000488185 RGPD8O14715 1765 aaPredicted RBP29.44■■■□□ 2.3
PKD1-221ENST00000488185 AFF2P51816 1311 aa29.43■■■□□ 2.3
PKD1-221ENST00000488185 C8orf37Q96NL8 207 aa29.4■■■□□ 2.3
PKD1-221ENST00000488185 FNBP4Q8N3X1 1017 aaPredicted RBP29.39■■■□□ 2.3
PKD1-221ENST00000488185 TNS3Q68CZ2 1445 aa29.38■■■□□ 2.29
PKD1-221ENST00000488185 ADAMTS2O95450 1211 aa29.38■■■□□ 2.29
PKD1-221ENST00000488185 PMFBP1Q8TBY8 1022 aa29.37■■■□□ 2.29
PKD1-221ENST00000488185 NGLY1Q96IV0 654 aa29.37■■■□□ 2.29
PKD1-221ENST00000488185 ATP7BP35670 1465 aa29.36■■■□□ 2.29
PKD1-221ENST00000488185 TRPM1Q7Z4N2 1603 aa29.36■■■□□ 2.29
PKD1-221ENST00000488185 NUDT16Q96DE0 195 aaKnown RBP29.36■■■□□ 2.29
PKD1-221ENST00000488185 CDK19Q9BWU1 502 aa29.36■■■□□ 2.29
PKD1-221ENST00000488185 CENPJQ9HC77 1338 aaPredicted RBP29.36■■■□□ 2.29
PKD1-221ENST00000488185 ARHGEF10O15013 1369 aa29.35■■■□□ 2.29
PKD1-221ENST00000488185 RXRBP28702 533 aa29.33■■■□□ 2.29
PKD1-221ENST00000488185 GPRASP1Q5JY77 1395 aa29.33■■■□□ 2.29
PKD1-221ENST00000488185 CDK12Q9NYV4 1490 aaPredicted RBP29.33■■■□□ 2.29
PKD1-221ENST00000488185 CCDC61Q9Y6R9 512 aa29.32■■■□□ 2.28
PKD1-221ENST00000488185 NBPF8Q3BBV2 869 aa29.3■■■□□ 2.28
PKD1-221ENST00000488185 QTRT2Q9H974 415 aaKnown RBP29.3■■■□□ 2.28
PKD1-221ENST00000488185 ROCK2O75116 1388 aaKnown RBP29.29■■■□□ 2.28
PKD1-221ENST00000488185 PLEKHG3A1L390 1219 aa29.29■■■□□ 2.28
PKD1-221ENST00000488185 NGDNQ8NEJ9 315 aaKnown RBP29.28■■■□□ 2.28
PKD1-221ENST00000488185 ITSN1Q15811 1721 aa29.28■■■□□ 2.28
PKD1-221ENST00000488185 POLR3AO14802 1390 aaPredicted RBP29.27■■■□□ 2.28
PKD1-221ENST00000488185 TONSLQ96HA7 1378 aa29.27■■■□□ 2.28
PKD1-221ENST00000488185 RBM6P78332 1123 aaKnown RBP29.27■■■□□ 2.28
PKD1-221ENST00000488185 USP21Q9UK80 565 aa29.27■■■□□ 2.28
PKD1-221ENST00000488185 TRPM3Q9HCF6 1732 aaPredicted RBP29.27■■■□□ 2.28
PKD1-221ENST00000488185 MARF1Q9Y4F3 1742 aaKnown RBP29.25■■■□□ 2.27
PKD1-221ENST00000488185 BCL9LQ86UU0 1499 aa29.24■■■□□ 2.27
PKD1-221ENST00000488185 TRPC5Q9UL62 973 aaPredicted RBP29.24■■■□□ 2.27
PKD1-221ENST00000488185 TOPAZ1Q8N9V7 1692 aa29.24■■■□□ 2.27
PKD1-221ENST00000488185 ALS2Q96Q42 1657 aa29.21■■■□□ 2.27
PKD1-221ENST00000488185 ATRNO75882 1429 aa29.21■■■□□ 2.27
PKD1-221ENST00000488185 SLIT2O94813 1529 aa29.2■■■□□ 2.27
PKD1-221ENST00000488185 QRICH2Q9H0J4 1663 aa29.2■■■□□ 2.26
PKD1-221ENST00000488185 ACEP12821 1306 aa29.2■■■□□ 2.26
PKD1-221ENST00000488185 RALGAPBQ86X10 1494 aa29.19■■■□□ 2.26
PKD1-221ENST00000488185 SRPK2P78362 688 aaKnown RBP29.19■■■□□ 2.26
PKD1-221ENST00000488185 SBNO2Q9Y2G9 1366 aa29.18■■■□□ 2.26
PKD1-221ENST00000488185 LMOD2Q6P5Q4 547 aa29.18■■■□□ 2.26
PKD1-221ENST00000488185 CABLES1Q8TDN4 633 aa29.18■■■□□ 2.26
PKD1-221ENST00000488185 EVC2Q86UK5 1308 aa29.18■■■□□ 2.26
PKD1-221ENST00000488185 BRD4O60885 1362 aaPredicted RBP29.16■■■□□ 2.26
PKD1-221ENST00000488185 UNC5CLQ8IV45 518 aa29.15■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms