RNA–Protein interactions for RNA: ENST00000488087.1

ECHDC1-217, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 3

Gene ECHDC1, Length 473 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-217ENST00000488087 C6orf229H3BNL8 230 aa8.02□□□□□ -1.13
ECHDC1-217ENST00000488087 COPS2P61201 443 aa8.02□□□□□ -1.13
ECHDC1-217ENST00000488087 ZBTB3Q9H5J0 574 aa8.02□□□□□ -1.13
ECHDC1-217ENST00000488087 PCDHGC3Q9UN70 934 aa8.02□□□□□ -1.13
ECHDC1-217ENST00000488087 SLC27A5Q9Y2P5 690 aa8.02□□□□□ -1.13
ECHDC1-217ENST00000488087 NR1I2O75469 434 aa8.01□□□□□ -1.13
ECHDC1-217ENST00000488087 QPCTQ16769 361 aa8.01□□□□□ -1.13
ECHDC1-217ENST00000488087 Q3C1V9 767 aa8.01□□□□□ -1.13
ECHDC1-217ENST00000488087 BLOC1S3Q6QNY0 202 aa8.01□□□□□ -1.13
ECHDC1-217ENST00000488087 CABLES1Q8TDN4 633 aa8.01□□□□□ -1.13
ECHDC1-217ENST00000488087 HRCP23327 699 aa8□□□□□ -1.13
ECHDC1-217ENST00000488087 MTMR2Q13614 643 aa8□□□□□ -1.13
ECHDC1-217ENST00000488087 LAPTM4AQ15012 233 aa8□□□□□ -1.13
ECHDC1-217ENST00000488087 PRPF38BQ5VTL8 546 aaKnown RBP8□□□□□ -1.13
ECHDC1-217ENST00000488087 LILRB3O75022 631 aa7.99□□□□□ -1.13
ECHDC1-217ENST00000488087 RFC5P40937 340 aa7.99□□□□□ -1.13
ECHDC1-217ENST00000488087 SCUBE3Q8IX30 993 aa7.99□□□□□ -1.13
ECHDC1-217ENST00000488087 RTL5Q5HYW3 569 aaPredicted RBP7.98□□□□□ -1.13
ECHDC1-217ENST00000488087 TSC1Q92574 1164 aa7.98□□□□□ -1.13
ECHDC1-217ENST00000488087 SYMPKQ92797 1274 aaKnown RBP7.98□□□□□ -1.13
ECHDC1-217ENST00000488087 SPDYE5A6NIY4 337 aa7.97□□□□□ -1.13
ECHDC1-217ENST00000488087 ITGBL1O95965 494 aaPredicted RBP7.97□□□□□ -1.13
ECHDC1-217ENST00000488087 PPP2R2DQ66LE6 453 aa7.97□□□□□ -1.13
ECHDC1-217ENST00000488087 MTRQ99707 1265 aa7.97□□□□□ -1.13
ECHDC1-217ENST00000488087 FMNL1O95466 1100 aaPredicted RBP7.96□□□□□ -1.14
ECHDC1-217ENST00000488087 FBXO31Q5XUX0 539 aaPredicted RBP7.96□□□□□ -1.14
ECHDC1-217ENST00000488087 RNF19BQ6ZMZ0 732 aa7.96□□□□□ -1.14
ECHDC1-217ENST00000488087 AP1G2O75843 785 aa7.95□□□□□ -1.14
ECHDC1-217ENST00000488087 TMEM259Q4ZIN3 620 aa7.95□□□□□ -1.14
ECHDC1-217ENST00000488087 RETREG3Q86VR2 466 aa7.95□□□□□ -1.14
ECHDC1-217ENST00000488087 ZPR1O75312 459 aa7.94□□□□□ -1.14
ECHDC1-217ENST00000488087 BRICD5Q6PL45 260 aa7.94□□□□□ -1.14
ECHDC1-217ENST00000488087 HELBQ8NG08 1087 aaPredicted RBP7.94□□□□□ -1.14
ECHDC1-217ENST00000488087 PRR7Q8TB68 274 aa7.94□□□□□ -1.14
ECHDC1-217ENST00000488087 USB1Q9BQ65 265 aaKnown RBP7.94□□□□□ -1.14
ECHDC1-217ENST00000488087 IL21Q9HBE4 155 aa7.94□□□□□ -1.14
ECHDC1-217ENST00000488087 SALL2Q9Y467 1007 aaPredicted RBP7.94□□□□□ -1.14
ECHDC1-217ENST00000488087 FLIIQ13045 1269 aa7.93□□□□□ -1.14
ECHDC1-217ENST00000488087 TJAP1Q5JTD0 557 aa7.93□□□□□ -1.14
ECHDC1-217ENST00000488087 TRAF7Q6Q0C0 670 aa7.93□□□□□ -1.14
ECHDC1-217ENST00000488087 C14orf37Q86TY3 774 aa7.93□□□□□ -1.14
ECHDC1-217ENST00000488087 SPSB2Q99619 263 aa7.93□□□□□ -1.14
ECHDC1-217ENST00000488087 CFAP99D6REC4 459 aa7.92□□□□□ -1.14
ECHDC1-217ENST00000488087 TLL1O43897 1013 aa7.92□□□□□ -1.14
ECHDC1-217ENST00000488087 ZNF516Q92618 1163 aa7.92□□□□□ -1.14
ECHDC1-217ENST00000488087 THAP11Q96EK4 314 aa7.92□□□□□ -1.14
ECHDC1-217ENST00000488087 BANK1Q8NDB2 785 aa7.91□□□□□ -1.14
ECHDC1-217ENST00000488087 ADH1BP00325 375 aa7.9□□□□□ -1.14
ECHDC1-217ENST00000488087 USP17L8P0C7I0 530 aa7.9□□□□□ -1.14
ECHDC1-217ENST00000488087 KCNC4Q03721 635 aa7.9□□□□□ -1.14
ECHDC1-217ENST00000488087 CTDSPL2Q05D32 466 aa7.9□□□□□ -1.14
ECHDC1-217ENST00000488087 ERICH6Q7L0X2 663 aa7.9□□□□□ -1.14
ECHDC1-217ENST00000488087 GFRA3O60609 400 aa7.89□□□□□ -1.15
ECHDC1-217ENST00000488087 MCM6Q14566 821 aa7.89□□□□□ -1.15
ECHDC1-217ENST00000488087 SNRKQ9NRH2 765 aa7.88□□□□□ -1.15
ECHDC1-217ENST00000488087 UBTFP17480 764 aaKnown RBP7.87□□□□□ -1.15
ECHDC1-217ENST00000488087 MSS51Q4VC12 460 aa7.87□□□□□ -1.15
ECHDC1-217ENST00000488087 DESI1Q6ICB0 168 aa7.87□□□□□ -1.15
ECHDC1-217ENST00000488087 FAM160A2Q8N612 972 aaPredicted RBP7.87□□□□□ -1.15
ECHDC1-217ENST00000488087 NKX2-3Q8TAU0 364 aa7.87□□□□□ -1.15
ECHDC1-217ENST00000488087 PRDM9Q9NQV7 894 aa7.87□□□□□ -1.15
ECHDC1-217ENST00000488087 TIMELESSQ9UNS1 1208 aa7.87□□□□□ -1.15
ECHDC1-217ENST00000488087 APBB1O00213 710 aa7.86□□□□□ -1.15
ECHDC1-217ENST00000488087 JUNDP17535 347 aa7.86□□□□□ -1.15
ECHDC1-217ENST00000488087 SLC6A16Q9GZN6 736 aa7.86□□□□□ -1.15
ECHDC1-217ENST00000488087 PER1O15534 1290 aaPredicted RBP7.85□□□□□ -1.15
ECHDC1-217ENST00000488087 LRRN4Q8WUT4 740 aa7.85□□□□□ -1.15
ECHDC1-217ENST00000488087 LCE2BO14633 110 aa7.84□□□□□ -1.15
ECHDC1-217ENST00000488087 S1PR4O95977 384 aa7.84□□□□□ -1.15
ECHDC1-217ENST00000488087 LYPD8Q6UX82 237 aa7.84□□□□□ -1.15
ECHDC1-217ENST00000488087 MTMR14Q8NCE2 650 aa7.84□□□□□ -1.15
ECHDC1-217ENST00000488087 RAD21O60216 631 aa7.83□□□□□ -1.16
ECHDC1-217ENST00000488087 DXOO77932 396 aaKnown RBP7.83□□□□□ -1.16
ECHDC1-217ENST00000488087 PTPRNQ16849 979 aa7.83□□□□□ -1.16
ECHDC1-217ENST00000488087 NUDT12Q9BQG2 462 aa7.83□□□□□ -1.16
ECHDC1-217ENST00000488087 PRM3Q9NNZ6 103 aa7.83□□□□□ -1.16
ECHDC1-217ENST00000488087 HMX1Q9NP08 348 aaPredicted RBP7.83□□□□□ -1.16
ECHDC1-217ENST00000488087 MMP16P51512 607 aa7.82□□□□□ -1.16
ECHDC1-217ENST00000488087 CCDC24Q8N4L8 307 aa7.82□□□□□ -1.16
ECHDC1-217ENST00000488087 NRG2O14511 850 aaPredicted RBP7.81□□□□□ -1.16
ECHDC1-217ENST00000488087 CCNYL3P0C7X3 344 aa7.81□□□□□ -1.16
ECHDC1-217ENST00000488087 CTHP32929 405 aa7.81□□□□□ -1.16
ECHDC1-217ENST00000488087 GGCXP38435 758 aa7.81□□□□□ -1.16
ECHDC1-217ENST00000488087 SOCS7O14512 581 aa7.8□□□□□ -1.16
ECHDC1-217ENST00000488087 NR6A1Q15406 480 aa7.8□□□□□ -1.16
ECHDC1-217ENST00000488087 ZNF787Q6DD87 383 aa7.8□□□□□ -1.16
ECHDC1-217ENST00000488087 CLUAP1Q96AJ1 413 aa7.8□□□□□ -1.16
ECHDC1-217ENST00000488087 ZMYND15Q9H091 742 aa7.79□□□□□ -1.16
ECHDC1-217ENST00000488087 GDPD2Q9HCC8 539 aa7.79□□□□□ -1.16
ECHDC1-217ENST00000488087 MAP10Q9P2G4 905 aa7.79□□□□□ -1.16
ECHDC1-217ENST00000488087 FCF1Q9Y324 198 aaKnown RBP7.79□□□□□ -1.16
ECHDC1-217ENST00000488087 NDUFB9Q9Y6M9 179 aa7.79□□□□□ -1.16
ECHDC1-217ENST00000488087 PNMA1Q8ND90 353 aa7.78□□□□□ -1.16
ECHDC1-217ENST00000488087 EPS8L1Q8TE68 723 aa7.78□□□□□ -1.16
ECHDC1-217ENST00000488087 POM121Q96HA1 1249 aa7.78□□□□□ -1.16
ECHDC1-217ENST00000488087 GJD4Q96KN9 370 aaPredicted RBP7.78□□□□□ -1.16
ECHDC1-217ENST00000488087 EVA1BQ9NVM1 165 aa7.78□□□□□ -1.16
ECHDC1-217ENST00000488087 TBC1D2BQ9UPU7 963 aa7.78□□□□□ -1.16
ECHDC1-217ENST00000488087 PPEF1O14829 653 aaPredicted RBP7.77□□□□□ -1.17
ECHDC1-217ENST00000488087 F12P00748 615 aaPredicted RBP7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms