RNA–Protein interactions for RNA: ENST00000488013.1

HDLBP-242, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 651 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-242ENST00000488013 PTPRUQ92729 1446 aa15.35■□□□□ 0.05
HDLBP-242ENST00000488013 POLR1AO95602 1720 aaPredicted RBP15.35■□□□□ 0.05
HDLBP-242ENST00000488013 ROBO2Q9HCK4 1378 aa15.35■□□□□ 0.05
HDLBP-242ENST00000488013 NCOA3Q9Y6Q9 1424 aa15.34■□□□□ 0.05
HDLBP-242ENST00000488013 NKTRP30414 1462 aaKnown RBP15.34■□□□□ 0.05
HDLBP-242ENST00000488013 WAPLQ7Z5K2 1190 aa15.33■□□□□ 0.04
HDLBP-242ENST00000488013 PROSER2Q86WR7 435 aaPredicted RBP15.33■□□□□ 0.04
HDLBP-242ENST00000488013 HIRIP3Q9BW71 556 aaPredicted RBP15.33■□□□□ 0.04
HDLBP-242ENST00000488013 CPS1P31327 1500 aa15.33■□□□□ 0.04
HDLBP-242ENST00000488013 SETD1AO15047 1707 aaKnown RBP15.31■□□□□ 0.04
HDLBP-242ENST00000488013 SAFB2Q14151 953 aaKnown RBP eCLIP15.3■□□□□ 0.04
HDLBP-242ENST00000488013 CCDC7Q96M83 1385 aa15.29■□□□□ 0.04
HDLBP-242ENST00000488013 MINK1Q8N4C8 1332 aaPredicted RBP15.29■□□□□ 0.04
HDLBP-242ENST00000488013 WASLO00401 505 aaPredicted RBP15.29■□□□□ 0.04
HDLBP-242ENST00000488013 C14orf37Q86TY3 774 aa15.29■□□□□ 0.04
HDLBP-242ENST00000488013 NWD1Q149M9 1564 aa15.28■□□□□ 0.04
HDLBP-242ENST00000488013 ATAD2Q6PL18 1390 aa15.28■□□□□ 0.04
HDLBP-242ENST00000488013 PLEKHH1Q9ULM0 1364 aa15.28■□□□□ 0.04
HDLBP-242ENST00000488013 NINLQ9Y2I6 1382 aa15.28■□□□□ 0.04
HDLBP-242ENST00000488013 KIF7Q2M1P5 1343 aa15.28■□□□□ 0.04
HDLBP-242ENST00000488013 SRPK2P78362 688 aaKnown RBP15.28■□□□□ 0.04
HDLBP-242ENST00000488013 C19orf44Q9H6X5 657 aa15.28■□□□□ 0.04
HDLBP-242ENST00000488013 KNDC1Q76NI1 1749 aa15.28■□□□□ 0.04
HDLBP-242ENST00000488013 STRCQ7RTU9 1775 aa15.27■□□□□ 0.04
HDLBP-242ENST00000488013 WASHC2AQ641Q2 1341 aa15.27■□□□□ 0.04
HDLBP-242ENST00000488013 XRN1Q8IZH2 1706 aaKnown RBP15.27■□□□□ 0.04
HDLBP-242ENST00000488013 CDK19Q9BWU1 502 aa15.27■□□□□ 0.04
HDLBP-242ENST00000488013 DISP3Q9P2K9 1392 aa15.25■□□□□ 0.03
HDLBP-242ENST00000488013 ZNF335Q9H4Z2 1342 aaPredicted RBP15.25■□□□□ 0.03
HDLBP-242ENST00000488013 ADGRL3Q9HAR2 1447 aa15.25■□□□□ 0.03
HDLBP-242ENST00000488013 TMEM94Q12767 1356 aa15.24■□□□□ 0.03
HDLBP-242ENST00000488013 C11orf95C9JLR9 678 aaPredicted RBP15.24■□□□□ 0.03
HDLBP-242ENST00000488013 CADPS2Q86UW7 1296 aa15.24■□□□□ 0.03
HDLBP-242ENST00000488013 CCDC61Q9Y6R9 512 aa15.24■□□□□ 0.03
HDLBP-242ENST00000488013 ATF3P18847 181 aa15.23■□□□□ 0.03
HDLBP-242ENST00000488013 POLR3GLQ9BT43 218 aa15.23■□□□□ 0.03
HDLBP-242ENST00000488013 DCCP43146 1447 aa15.23■□□□□ 0.03
HDLBP-242ENST00000488013 ARHGEF28Q8N1W1 1705 aaKnown RBP15.23■□□□□ 0.03
HDLBP-242ENST00000488013 MSH6P52701 1360 aa15.23■□□□□ 0.03
HDLBP-242ENST00000488013 CHD2O14647 1828 aaKnown RBP15.22■□□□□ 0.03
HDLBP-242ENST00000488013 ANKARQ7Z5J8 1434 aa15.21■□□□□ 0.03
HDLBP-242ENST00000488013 NUDT16Q96DE0 195 aaKnown RBP15.21■□□□□ 0.03
HDLBP-242ENST00000488013 CABP2Q9NPB3 220 aa15.21■□□□□ 0.03
HDLBP-242ENST00000488013 TERF2IPQ9NYB0 399 aa15.21■□□□□ 0.03
HDLBP-242ENST00000488013 ADGRB2O60241 1585 aa15.2■□□□□ 0.02
HDLBP-242ENST00000488013 TMC1Q8TDI8 760 aa15.19■□□□□ 0.02
HDLBP-242ENST00000488013 LRRC7Q96NW7 1537 aa15.18■□□□□ 0.02
HDLBP-242ENST00000488013 DDX10Q13206 875 aaKnown RBP15.18■□□□□ 0.02
HDLBP-242ENST00000488013 ZNF692Q9BU19 519 aaPredicted RBP15.18■□□□□ 0.02
HDLBP-242ENST00000488013 QRICH2Q9H0J4 1663 aa15.18■□□□□ 0.02
HDLBP-242ENST00000488013 TULP4Q9NRJ4 1543 aa15.17■□□□□ 0.02
HDLBP-242ENST00000488013 PLEKHG3A1L390 1219 aa15.17■□□□□ 0.02
HDLBP-242ENST00000488013 HDGFL2Q7Z4V5 671 aaPredicted RBP15.17■□□□□ 0.02
HDLBP-242ENST00000488013 CDC42BPGQ6DT37 1551 aa15.16■□□□□ 0.02
HDLBP-242ENST00000488013 RBM33Q96EV2 1170 aaKnown RBP15.15■□□□□ 0.02
HDLBP-242ENST00000488013 SLC12A5Q9H2X9 1139 aa15.15■□□□□ 0.02
HDLBP-242ENST00000488013 PANK3Q9H999 370 aa15.15■□□□□ 0.02
HDLBP-242ENST00000488013 CABP1Q9NZU7 370 aa15.15■□□□□ 0.02
HDLBP-242ENST00000488013 ANKRD36BQ8N2N9 1353 aa15.14■□□□□ 0.01
HDLBP-242ENST00000488013 KNSTRNQ9Y448 316 aa15.14■□□□□ 0.01
HDLBP-242ENST00000488013 DIEXFQ68CQ4 756 aaKnown RBP15.13■□□□□ 0.01
HDLBP-242ENST00000488013 PPIP5K1Q6PFW1 1433 aa15.12■□□□□ 0.01
HDLBP-242ENST00000488013 ATP7BP35670 1465 aa15.12■□□□□ 0.01
HDLBP-242ENST00000488013 PRR36Q9H6K5 1346 aa15.12■□□□□ 0.01
HDLBP-242ENST00000488013 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.12■□□□□ 0.01
HDLBP-242ENST00000488013 BRD4O60885 1362 aaPredicted RBP15.11■□□□□ 0.01
HDLBP-242ENST00000488013 ESCO1Q5FWF5 840 aa15.11■□□□□ 0.01
HDLBP-242ENST00000488013 NGDNQ8NEJ9 315 aaKnown RBP15.11■□□□□ 0.01
HDLBP-242ENST00000488013 SLAIN2Q9P270 581 aa15.11■□□□□ 0.01
HDLBP-242ENST00000488013 PHF8Q9UPP1 1060 aa15.11■□□□□ 0.01
HDLBP-242ENST00000488013 LTBP4Q8N2S1 1624 aa15.1■□□□□ 0.01
HDLBP-242ENST00000488013 IQSEC2Q5JU85 1478 aa15.09■□□□□ 0.01
HDLBP-242ENST00000488013 NUTM2FA1L443 756 aa15.09■□□□□ 0.01
HDLBP-242ENST00000488013 TOM1O60784 492 aa15.09■□□□□ 0.01
HDLBP-242ENST00000488013 SLC4A2P04920 1241 aa15.09■□□□□ 0.01
HDLBP-242ENST00000488013 FBXO41Q8TF61 875 aa15.09■□□□□ 0.01
HDLBP-242ENST00000488013 CGNL1Q0VF96 1302 aa15.09■□□□□ 0.01
HDLBP-242ENST00000488013 POLR3AO14802 1390 aaPredicted RBP15.09■□□□□ 0.01
HDLBP-242ENST00000488013 NPC1L1Q9UHC9 1359 aa15.09■□□□□ 0.01
HDLBP-242ENST00000488013 C1orf167Q5SNV9 1468 aa15.08■□□□□ 0.01
HDLBP-242ENST00000488013 PER1O15534 1290 aaPredicted RBP15.08■□□□□ 0
HDLBP-242ENST00000488013 ACEP12821 1306 aa15.08■□□□□ 0
HDLBP-242ENST00000488013 KTN1Q86UP2 1357 aaKnown RBP15.08■□□□□ 0
HDLBP-242ENST00000488013 MST1RQ04912 1400 aa15.08■□□□□ 0
HDLBP-242ENST00000488013 CPSF1Q10570 1443 aaKnown RBP15.08■□□□□ 0
HDLBP-242ENST00000488013 ANP32CO43423 234 aa15.07■□□□□ 0
HDLBP-242ENST00000488013 PSME1Q06323 249 aa15.06■□□□□ 0
HDLBP-242ENST00000488013 NPHP3Q7Z494 1330 aa15.06■□□□□ 0
HDLBP-242ENST00000488013 A0A1W2PP64 1363 aa15.06■□□□□ 0
HDLBP-242ENST00000488013 NSD2O96028 1365 aa15.06■□□□□ 0
HDLBP-242ENST00000488013 PMFBP1Q8TBY8 1022 aa15.05■□□□□ -0
HDLBP-242ENST00000488013 CERKQ8TCT0 537 aa15.05■□□□□ -0
HDLBP-242ENST00000488013 CARD14Q9BXL6 1004 aa15.05■□□□□ -0
HDLBP-242ENST00000488013 EDC4Q6P2E9 1401 aaKnown RBP15.05■□□□□ -0
HDLBP-242ENST00000488013 STRCP1A6NGW2 1772 aa15.05■□□□□ -0
HDLBP-242ENST00000488013 NALCNQ8IZF0 1738 aa15.04■□□□□ -0
HDLBP-242ENST00000488013 TTC21AQ8NDW8 1320 aa15.04■□□□□ -0
HDLBP-242ENST00000488013 RALBP1Q15311 655 aa15.04■□□□□ -0
HDLBP-242ENST00000488013 RNF39Q9H2S5 420 aa15.04■□□□□ -0
HDLBP-242ENST00000488013 AMER1Q5JTC6 1135 aaPredicted RBP15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms