RNA–Protein interactions for RNA: ENST00000487894.5

HMG20B-212, Transcript of high mobility group 20B, humanhuman

TSL 2

Gene HMG20B, Length 1,242 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-212ENST00000487894 MED1Q15648 1581 aaPredicted RBP24.78■■□□□ 1.56
HMG20B-212ENST00000487894 PLEKHH1Q9ULM0 1364 aa24.78■■□□□ 1.56
HMG20B-212ENST00000487894 FMN2Q9NZ56 1722 aa24.78■■□□□ 1.56
HMG20B-212ENST00000487894 SOCS7O14512 581 aa24.76■■□□□ 1.55
HMG20B-212ENST00000487894 SIN3AQ96ST3 1273 aa24.75■■□□□ 1.55
HMG20B-212ENST00000487894 WAPLQ7Z5K2 1190 aa24.74■■□□□ 1.55
HMG20B-212ENST00000487894 C1orf167Q5SNV9 1468 aa24.74■■□□□ 1.55
HMG20B-212ENST00000487894 BRINP3Q76B58 766 aa24.73■■□□□ 1.55
HMG20B-212ENST00000487894 ADGRB2O60241 1585 aa24.71■■□□□ 1.55
HMG20B-212ENST00000487894 SIRT1Q96EB6 747 aa24.71■■□□□ 1.55
HMG20B-212ENST00000487894 RGPD8O14715 1765 aaPredicted RBP24.7■■□□□ 1.55
HMG20B-212ENST00000487894 SHPRHQ149N8 1683 aa24.7■■□□□ 1.54
HMG20B-212ENST00000487894 TRPM1Q7Z4N2 1603 aa24.7■■□□□ 1.54
HMG20B-212ENST00000487894 L3MBTL2Q969R5 705 aa24.67■■□□□ 1.54
HMG20B-212ENST00000487894 NEUROD1Q13562 356 aa24.66■■□□□ 1.54
HMG20B-212ENST00000487894 PRAM1Q96QH2 718 aa24.65■■□□□ 1.54
HMG20B-212ENST00000487894 TRAK1Q9UPV9 953 aa24.64■■□□□ 1.54
HMG20B-212ENST00000487894 KIF1AQ12756 1690 aa24.63■■□□□ 1.53
HMG20B-212ENST00000487894 USP32Q8NFA0 1604 aa24.63■■□□□ 1.53
HMG20B-212ENST00000487894 JCADQ9P266 1359 aa24.61■■□□□ 1.53
HMG20B-212ENST00000487894 SAFB2Q14151 953 aaKnown RBP eCLIP24.6■■□□□ 1.53
HMG20B-212ENST00000487894 ORAI2Q96SN7 254 aa24.6■■□□□ 1.53
HMG20B-212ENST00000487894 POGKQ9P215 609 aa24.59■■□□□ 1.53
HMG20B-212ENST00000487894 NBPF1Q3BBV0 1214 aa24.58■■□□□ 1.53
HMG20B-212ENST00000487894 DDX17Q92841 729 aaKnown RBP24.57■■□□□ 1.52
HMG20B-212ENST00000487894 QRICH2Q9H0J4 1663 aa24.56■■□□□ 1.52
HMG20B-212ENST00000487894 PCGF6Q9BYE7 350 aa24.56■■□□□ 1.52
HMG20B-212ENST00000487894 NUTM2FA1L443 756 aa24.55■■□□□ 1.52
HMG20B-212ENST00000487894 ITSN1Q15811 1721 aa24.54■■□□□ 1.52
HMG20B-212ENST00000487894 PXDNQ92626 1479 aa24.53■■□□□ 1.52
HMG20B-212ENST00000487894 TULP4Q9NRJ4 1543 aa24.53■■□□□ 1.52
HMG20B-212ENST00000487894 LRP6O75581 1613 aa24.53■■□□□ 1.52
HMG20B-212ENST00000487894 TONSLQ96HA7 1378 aa24.53■■□□□ 1.52
HMG20B-212ENST00000487894 ESCO1Q5FWF5 840 aa24.52■■□□□ 1.52
HMG20B-212ENST00000487894 MINK1Q8N4C8 1332 aaPredicted RBP24.52■■□□□ 1.52
HMG20B-212ENST00000487894 ANKARQ7Z5J8 1434 aa24.52■■□□□ 1.52
HMG20B-212ENST00000487894 COL22A1Q8NFW1 1626 aaPredicted RBP24.5■■□□□ 1.51
HMG20B-212ENST00000487894 HIRIP3Q9BW71 556 aaPredicted RBP24.5■■□□□ 1.51
HMG20B-212ENST00000487894 SOS2Q07890 1332 aaPredicted RBP24.5■■□□□ 1.51
HMG20B-212ENST00000487894 TOPAZ1Q8N9V7 1692 aa24.5■■□□□ 1.51
HMG20B-212ENST00000487894 SPATA31A6Q5VVP1 1343 aa24.48■■□□□ 1.51
HMG20B-212ENST00000487894 PNPLA6Q8IY17 1366 aa24.48■■□□□ 1.51
HMG20B-212ENST00000487894 NPHP3Q7Z494 1330 aa24.47■■□□□ 1.51
HMG20B-212ENST00000487894 NBPF8Q3BBV2 869 aa24.47■■□□□ 1.51
HMG20B-212ENST00000487894 LRRC59Q96AG4 307 aaKnown RBP24.47■■□□□ 1.51
HMG20B-212ENST00000487894 RALGAPBQ86X10 1494 aa24.46■■□□□ 1.51
HMG20B-212ENST00000487894 ROCK2O75116 1388 aaKnown RBP24.46■■□□□ 1.51
HMG20B-212ENST00000487894 EIF3AQ14152 1382 aaKnown RBP24.46■■□□□ 1.51
HMG20B-212ENST00000487894 ATP7BP35670 1465 aa24.45■■□□□ 1.51
HMG20B-212ENST00000487894 GPRASP1Q5JY77 1395 aa24.44■■□□□ 1.5
HMG20B-212ENST00000487894 WASLO00401 505 aaPredicted RBP24.44■■□□□ 1.5
HMG20B-212ENST00000487894 PRR36Q9H6K5 1346 aa24.43■■□□□ 1.5
HMG20B-212ENST00000487894 FOXO3O43524 673 aa24.43■■□□□ 1.5
HMG20B-212ENST00000487894 TRPM3Q9HCF6 1732 aaPredicted RBP24.43■■□□□ 1.5
HMG20B-212ENST00000487894 PHF8Q9UPP1 1060 aa24.42■■□□□ 1.5
HMG20B-212ENST00000487894 MARF1Q9Y4F3 1742 aaKnown RBP24.41■■□□□ 1.5
HMG20B-212ENST00000487894 CENPJQ9HC77 1338 aaPredicted RBP24.41■■□□□ 1.5
HMG20B-212ENST00000487894 XPCQ01831 940 aaPredicted RBP24.4■■□□□ 1.5
HMG20B-212ENST00000487894 ABCA3Q99758 1704 aa24.38■■□□□ 1.49
HMG20B-212ENST00000487894 RGS17Q9UGC6 210 aaPredicted RBP24.38■■□□□ 1.49
HMG20B-212ENST00000487894 CLSPNQ9HAW4 1339 aa24.37■■□□□ 1.49
HMG20B-212ENST00000487894 ALS2Q96Q42 1657 aa24.37■■□□□ 1.49
HMG20B-212ENST00000487894 TNS3Q68CZ2 1445 aa24.35■■□□□ 1.49
HMG20B-212ENST00000487894 NUTM2BA6NNL0 878 aaPredicted RBP24.34■■□□□ 1.49
HMG20B-212ENST00000487894 NUTM2EB1AL46 878 aaPredicted RBP24.34■■□□□ 1.49
HMG20B-212ENST00000487894 NUTM2AQ8IVF1 878 aaPredicted RBP24.34■■□□□ 1.49
HMG20B-212ENST00000487894 PMFBP1Q8TBY8 1022 aa24.34■■□□□ 1.49
HMG20B-212ENST00000487894 CDK19Q9BWU1 502 aa24.34■■□□□ 1.49
HMG20B-212ENST00000487894 KRT28Q7Z3Y7 464 aa24.33■■□□□ 1.49
HMG20B-212ENST00000487894 MEX3CQ5U5Q3 659 aaKnown RBP24.32■■□□□ 1.48
HMG20B-212ENST00000487894 NUDT16Q96DE0 195 aaKnown RBP24.32■■□□□ 1.48
HMG20B-212ENST00000487894 SPATA31A3Q5VYP0 1347 aa24.32■■□□□ 1.48
HMG20B-212ENST00000487894 SBNO1A3KN83 1393 aa24.3■■□□□ 1.48
HMG20B-212ENST00000487894 CRYBG1Q9Y4K1 1723 aa24.3■■□□□ 1.48
HMG20B-212ENST00000487894 CARD11Q9BXL7 1154 aa24.29■■□□□ 1.48
HMG20B-212ENST00000487894 PSME1Q06323 249 aa24.27■■□□□ 1.48
HMG20B-212ENST00000487894 SBNO2Q9Y2G9 1366 aa24.27■■□□□ 1.48
HMG20B-212ENST00000487894 POTEAQ6S8J7 498 aa24.25■■□□□ 1.47
HMG20B-212ENST00000487894 POLR3AO14802 1390 aaPredicted RBP24.25■■□□□ 1.47
HMG20B-212ENST00000487894 PPIP5K1Q6PFW1 1433 aa24.25■■□□□ 1.47
HMG20B-212ENST00000487894 AKAP12Q02952 1782 aa24.24■■□□□ 1.47
HMG20B-212ENST00000487894 SRPK2P78362 688 aaKnown RBP24.24■■□□□ 1.47
HMG20B-212ENST00000487894 CABP2Q9NPB3 220 aa24.24■■□□□ 1.47
HMG20B-212ENST00000487894 CCDC61Q9Y6R9 512 aa24.24■■□□□ 1.47
HMG20B-212ENST00000487894 NGDNQ8NEJ9 315 aaKnown RBP24.23■■□□□ 1.47
HMG20B-212ENST00000487894 TIMELESSQ9UNS1 1208 aa24.23■■□□□ 1.47
HMG20B-212ENST00000487894 ARHGEF10O15013 1369 aa24.23■■□□□ 1.47
HMG20B-212ENST00000487894 EVC2Q86UK5 1308 aa24.22■■□□□ 1.47
HMG20B-212ENST00000487894 ADAMTS2O95450 1211 aa24.22■■□□□ 1.47
HMG20B-212ENST00000487894 CCER1Q8TC90 406 aaPredicted RBP24.22■■□□□ 1.47
HMG20B-212ENST00000487894 PHRF1Q9P1Y6 1649 aaKnown RBP24.21■■□□□ 1.47
HMG20B-212ENST00000487894 AFF2P51816 1311 aa24.21■■□□□ 1.47
HMG20B-212ENST00000487894 C8orf37Q96NL8 207 aa24.21■■□□□ 1.47
HMG20B-212ENST00000487894 PLCH1Q4KWH8 1693 aa24.21■■□□□ 1.47
HMG20B-212ENST00000487894 PLEKHG3A1L390 1219 aa24.2■■□□□ 1.46
HMG20B-212ENST00000487894 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.2■■□□□ 1.46
HMG20B-212ENST00000487894 ACEP12821 1306 aa24.19■■□□□ 1.46
HMG20B-212ENST00000487894 ZNF772Q68DY9 489 aaPredicted RBP24.18■■□□□ 1.46
HMG20B-212ENST00000487894 NRKQ7Z2Y5 1582 aa24.16■■□□□ 1.46
HMG20B-212ENST00000487894 MON2Q7Z3U7 1717 aa24.16■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 103.5 ms