RNA–Protein interactions for RNA: ENST00000487519.5

TFAM-204, Transcript of transcription factor A, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TFAM, Length 5,414 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFAM-204ENST00000487519 ERICH2A1L162 156 aa16.99■□□□□ 0.31
TFAM-204ENST00000487519 SKOR2Q2VWA4 1001 aaPredicted RBP16.99■□□□□ 0.31
TFAM-204ENST00000487519 TXNDC2Q86VQ3 553 aa16.99■□□□□ 0.31
TFAM-204ENST00000487519 ADAMTS8Q9UP79 889 aa16.99■□□□□ 0.31
TFAM-204ENST00000487519 ERC2O15083 957 aa16.98■□□□□ 0.31
TFAM-204ENST00000487519 INTS3Q68E01 1043 aaKnown RBP16.98■□□□□ 0.31
TFAM-204ENST00000487519 CCDC27Q2M243 656 aa16.98■□□□□ 0.31
TFAM-204ENST00000487519 STAC3Q96MF2 364 aa16.98■□□□□ 0.31
TFAM-204ENST00000487519 SMC3Q9UQE7 1217 aa16.97■□□□□ 0.31
TFAM-204ENST00000487519 TCP11L2Q8N4U5 519 aa16.96■□□□□ 0.31
TFAM-204ENST00000487519 PRDM2Q13029 1718 aa16.96■□□□□ 0.31
TFAM-204ENST00000487519 RALYLQ86SE5 291 aaKnown RBP16.96■□□□□ 0.31
TFAM-204ENST00000487519 MTMR7Q9Y216 660 aa16.96■□□□□ 0.31
TFAM-204ENST00000487519 PROSER2Q86WR7 435 aaPredicted RBP16.95■□□□□ 0.3
TFAM-204ENST00000487519 PHF23Q9BUL5 403 aaPredicted RBP16.95■□□□□ 0.3
TFAM-204ENST00000487519 ZNF592Q92610 1267 aa16.95■□□□□ 0.3
TFAM-204ENST00000487519 CCDC47Q96A33 483 aaKnown RBP16.95■□□□□ 0.3
TFAM-204ENST00000487519 GPRASP1Q5JY77 1395 aa16.95■□□□□ 0.3
TFAM-204ENST00000487519 STRN4Q9NRL3 753 aa16.95■□□□□ 0.3
TFAM-204ENST00000487519 PRKAR2BP31323 418 aa16.94■□□□□ 0.3
TFAM-204ENST00000487519 PRAM1Q96QH2 718 aa16.94■□□□□ 0.3
TFAM-204ENST00000487519 RBM42Q9BTD8 480 aaKnown RBP16.94■□□□□ 0.3
TFAM-204ENST00000487519 GSE1Q14687 1217 aa16.94■□□□□ 0.3
TFAM-204ENST00000487519 CCDC43Q96MW1 224 aaKnown RBP16.93■□□□□ 0.3
TFAM-204ENST00000487519 CHMP5Q9NZZ3 219 aa16.93■□□□□ 0.3
TFAM-204ENST00000487519 KDM4AO75164 1064 aa16.92■□□□□ 0.3
TFAM-204ENST00000487519 IPO7O95373 1038 aaKnown RBP16.92■□□□□ 0.3
TFAM-204ENST00000487519 ARHGAP5Q13017 1502 aa16.92■□□□□ 0.3
TFAM-204ENST00000487519 SURF6O75683 361 aaKnown RBP16.92■□□□□ 0.3
TFAM-204ENST00000487519 TNNT3P45378 269 aaPredicted RBP16.92■□□□□ 0.3
TFAM-204ENST00000487519 CDCA7LQ96GN5 454 aa16.92■□□□□ 0.3
TFAM-204ENST00000487519 ANKRD20A12PQ8NF67 263 aa16.92■□□□□ 0.3
TFAM-204ENST00000487519 C22orf23Q9BZE7 217 aa16.92■□□□□ 0.3
TFAM-204ENST00000487519 SAFBQ15424 915 aaKnown RBP eCLIP16.91■□□□□ 0.3
TFAM-204ENST00000487519 NBPF1Q3BBV0 1214 aa16.91■□□□□ 0.3
TFAM-204ENST00000487519 ZNF428Q96B54 188 aa16.91■□□□□ 0.3
TFAM-204ENST00000487519 FSD1Q9BTV5 496 aa16.91■□□□□ 0.3
TFAM-204ENST00000487519 CWC22Q9HCG8 908 aaKnown RBP16.91■□□□□ 0.3
TFAM-204ENST00000487519 NCOA2Q15596 1464 aa16.91■□□□□ 0.3
TFAM-204ENST00000487519 CUX1P39880 1505 aa16.9■□□□□ 0.3
TFAM-204ENST00000487519 GAS2L2Q8NHY3 880 aa16.9■□□□□ 0.3
TFAM-204ENST00000487519 CLASRPQ8N2M8 674 aaKnown RBP16.9■□□□□ 0.3
TFAM-204ENST00000487519 WASHC2AQ641Q2 1341 aa16.9■□□□□ 0.3
TFAM-204ENST00000487519 CCDC30Q5VVM6 783 aa16.9■□□□□ 0.3
TFAM-204ENST00000487519 EXOSC9Q06265 439 aaKnown RBP16.89■□□□□ 0.29
TFAM-204ENST00000487519 SLC12A5Q9H2X9 1139 aa16.89■□□□□ 0.29
TFAM-204ENST00000487519 LRRC9Q6ZRR7 1453 aa16.89■□□□□ 0.29
TFAM-204ENST00000487519 CNTLNQ9NXG0 1405 aa16.89■□□□□ 0.29
TFAM-204ENST00000487519 PLEKHO1Q53GL0 409 aaPredicted RBP16.89■□□□□ 0.29
TFAM-204ENST00000487519 DNAJC2Q99543 621 aaKnown RBP16.89■□□□□ 0.29
TFAM-204ENST00000487519 HOOK1Q9UJC3 728 aaKnown RBP16.89■□□□□ 0.29
TFAM-204ENST00000487519 PPP2R1AP30153 589 aa16.88■□□□□ 0.29
TFAM-204ENST00000487519 CDC45O75419 566 aa16.88■□□□□ 0.29
TFAM-204ENST00000487519 CCDC73Q6ZRK6 1079 aa16.88■□□□□ 0.29
TFAM-204ENST00000487519 C1orf115Q9H7X2 142 aa16.88■□□□□ 0.29
TFAM-204ENST00000487519 GNAI3P08754 354 aa16.87■□□□□ 0.29
TFAM-204ENST00000487519 NUCB2P80303 420 aa16.86■□□□□ 0.29
TFAM-204ENST00000487519 TWISTNBQ3B726 338 aaPredicted RBP16.86■□□□□ 0.29
TFAM-204ENST00000487519 SASS6Q6UVJ0 657 aa16.86■□□□□ 0.29
TFAM-204ENST00000487519 HOMER1Q86YM7 354 aa16.86■□□□□ 0.29
TFAM-204ENST00000487519 IKQ13123 557 aaPredicted RBP16.86■□□□□ 0.29
TFAM-204ENST00000487519 TSR2Q969E8 191 aaKnown RBP16.86■□□□□ 0.29
TFAM-204ENST00000487519 CABP1Q9NZU7 370 aa16.86■□□□□ 0.29
TFAM-204ENST00000487519 SULT6B1Q6IMI4 303 aa16.86■□□□□ 0.29
TFAM-204ENST00000487519 PRG4Q92954 1404 aaPredicted RBP16.85■□□□□ 0.29
TFAM-204ENST00000487519 RRBP1Q9P2E9 1410 aaKnown RBP16.85■□□□□ 0.29
TFAM-204ENST00000487519 CNTROBQ8N137 903 aa16.85■□□□□ 0.29
TFAM-204ENST00000487519 CCDC70Q6NSX1 233 aa16.85■□□□□ 0.29
TFAM-204ENST00000487519 FYCO1Q9BQS8 1478 aa16.85■□□□□ 0.29
TFAM-204ENST00000487519 ATP2B1P20020 1258 aa16.84■□□□□ 0.29
TFAM-204ENST00000487519 DDX54Q8TDD1 881 aaKnown RBP16.84■□□□□ 0.29
TFAM-204ENST00000487519 TBC1D2BQ9UPU7 963 aa16.84■□□□□ 0.29
TFAM-204ENST00000487519 KIF6Q6ZMV9 814 aa16.84■□□□□ 0.29
TFAM-204ENST00000487519 BRD4O60885 1362 aaPredicted RBP16.84■□□□□ 0.29
TFAM-204ENST00000487519 KIF21BO75037 1637 aa16.84■□□□□ 0.29
TFAM-204ENST00000487519 SLC26A8Q96RN1 970 aa16.84■□□□□ 0.29
TFAM-204ENST00000487519 TATP17735 454 aaPredicted RBP16.84■□□□□ 0.29
TFAM-204ENST00000487519 CDK19Q9BWU1 502 aa16.84■□□□□ 0.29
TFAM-204ENST00000487519 NUTM2BA6NNL0 878 aaPredicted RBP16.83■□□□□ 0.29
TFAM-204ENST00000487519 NUTM2EB1AL46 878 aaPredicted RBP16.83■□□□□ 0.29
TFAM-204ENST00000487519 NUTM2AQ8IVF1 878 aaPredicted RBP16.83■□□□□ 0.29
TFAM-204ENST00000487519 CASKIN1Q8WXD9 1431 aa16.83■□□□□ 0.29
TFAM-204ENST00000487519 NINLQ9Y2I6 1382 aa16.83■□□□□ 0.28
TFAM-204ENST00000487519 HDGFL1Q5TGJ6 251 aa16.83■□□□□ 0.28
TFAM-204ENST00000487519 CNKSR2Q8WXI2 1034 aa16.83■□□□□ 0.28
TFAM-204ENST00000487519 SLC4A2P04920 1241 aa16.83■□□□□ 0.28
TFAM-204ENST00000487519 THEMISQ8N1K5 641 aaPredicted RBP16.82■□□□□ 0.28
TFAM-204ENST00000487519 SYNJ2O15056 1496 aa16.82■□□□□ 0.28
TFAM-204ENST00000487519 SCAPERQ9BY12 1400 aa16.82■□□□□ 0.28
TFAM-204ENST00000487519 TOM1L2Q6ZVM7 507 aa16.82■□□□□ 0.28
TFAM-204ENST00000487519 PPP1R1BQ9UD71 204 aaPredicted RBP16.82■□□□□ 0.28
TFAM-204ENST00000487519 CFTRP13569 1480 aa16.82■□□□□ 0.28
TFAM-204ENST00000487519 RRP12Q5JTH9 1297 aaKnown RBP16.81■□□□□ 0.28
TFAM-204ENST00000487519 GRIN2BQ13224 1484 aa16.81■□□□□ 0.28
TFAM-204ENST00000487519 RAPGEF3O95398 923 aa16.81■□□□□ 0.28
TFAM-204ENST00000487519 PSMA5P28066 241 aa16.81■□□□□ 0.28
TFAM-204ENST00000487519 SDF4Q9BRK5 362 aa16.81■□□□□ 0.28
TFAM-204ENST00000487519 BRMS1Q9HCU9 246 aa16.81■□□□□ 0.28
TFAM-204ENST00000487519 CNNM1Q9NRU3 951 aa16.81■□□□□ 0.28
TFAM-204ENST00000487519 AAMPQ13685 434 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms