RNA–Protein interactions for RNA: ENST00000487476.5

NF1-211, Transcript of neurofibromin 1, humanhuman

TSL 1 (best) BASIC

Gene NF1, Length 2,265 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-211ENST00000487476 NWD1Q149M9 1564 aa23.56■■□□□ 1.36
NF1-211ENST00000487476 SCAF1Q9H7N4 1312 aaKnown RBP23.56■■□□□ 1.36
NF1-211ENST00000487476 TMF1P82094 1093 aa23.56■■□□□ 1.36
NF1-211ENST00000487476 SBNO2Q9Y2G9 1366 aa23.55■■□□□ 1.36
NF1-211ENST00000487476 KIF7Q2M1P5 1343 aa23.55■■□□□ 1.36
NF1-211ENST00000487476 PROSER2Q86WR7 435 aaPredicted RBP23.55■■□□□ 1.36
NF1-211ENST00000487476 POLR3GLQ9BT43 218 aa23.55■■□□□ 1.36
NF1-211ENST00000487476 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.52■■□□□ 1.36
NF1-211ENST00000487476 CCDC7Q96M83 1385 aa23.51■■□□□ 1.35
NF1-211ENST00000487476 TULP4Q9NRJ4 1543 aa23.5■■□□□ 1.35
NF1-211ENST00000487476 NKTRP30414 1462 aaKnown RBP23.5■■□□□ 1.35
NF1-211ENST00000487476 CDK19Q9BWU1 502 aa23.49■■□□□ 1.35
NF1-211ENST00000487476 CABP2Q9NPB3 220 aa23.49■■□□□ 1.35
NF1-211ENST00000487476 EVC2Q86UK5 1308 aa23.49■■□□□ 1.35
NF1-211ENST00000487476 TMEM94Q12767 1356 aa23.48■■□□□ 1.35
NF1-211ENST00000487476 WASLO00401 505 aaPredicted RBP23.47■■□□□ 1.35
NF1-211ENST00000487476 C14orf37Q86TY3 774 aa23.47■■□□□ 1.35
NF1-211ENST00000487476 SLC24A1O60721 1099 aa23.46■■□□□ 1.35
NF1-211ENST00000487476 SRPK2P78362 688 aaKnown RBP23.46■■□□□ 1.35
NF1-211ENST00000487476 NUTM2FA1L443 756 aa23.44■■□□□ 1.34
NF1-211ENST00000487476 DDX10Q13206 875 aaKnown RBP23.44■■□□□ 1.34
NF1-211ENST00000487476 LRRC7Q96NW7 1537 aa23.43■■□□□ 1.34
NF1-211ENST00000487476 CDCA8Q53HL2 280 aa23.42■■□□□ 1.34
NF1-211ENST00000487476 ADGRL3Q9HAR2 1447 aa23.42■■□□□ 1.34
NF1-211ENST00000487476 NALCNQ8IZF0 1738 aa23.41■■□□□ 1.34
NF1-211ENST00000487476 ADGRB2O60241 1585 aa23.4■■□□□ 1.34
NF1-211ENST00000487476 PRR36Q9H6K5 1346 aa23.39■■□□□ 1.33
NF1-211ENST00000487476 C19orf44Q9H6X5 657 aa23.38■■□□□ 1.33
NF1-211ENST00000487476 NUDT16Q96DE0 195 aaKnown RBP23.38■■□□□ 1.33
NF1-211ENST00000487476 LTBP4Q8N2S1 1624 aa23.37■■□□□ 1.33
NF1-211ENST00000487476 TMC1Q8TDI8 760 aa23.37■■□□□ 1.33
NF1-211ENST00000487476 SLC12A5Q9H2X9 1139 aa23.37■■□□□ 1.33
NF1-211ENST00000487476 PUS7Q96PZ0 661 aaKnown RBP23.36■■□□□ 1.33
NF1-211ENST00000487476 NCOA3Q9Y6Q9 1424 aa23.35■■□□□ 1.33
NF1-211ENST00000487476 DIEXFQ68CQ4 756 aaKnown RBP23.35■■□□□ 1.33
NF1-211ENST00000487476 XIRP1Q702N8 1843 aaKnown RBP23.35■■□□□ 1.33
NF1-211ENST00000487476 CABP1Q9NZU7 370 aa23.34■■□□□ 1.33
NF1-211ENST00000487476 ATAD2Q6PL18 1390 aa23.33■■□□□ 1.33
NF1-211ENST00000487476 CDC42BPGQ6DT37 1551 aa23.32■■□□□ 1.32
NF1-211ENST00000487476 ATP7BP35670 1465 aa23.32■■□□□ 1.32
NF1-211ENST00000487476 CCDC61Q9Y6R9 512 aa23.31■■□□□ 1.32
NF1-211ENST00000487476 MSH6P52701 1360 aa23.31■■□□□ 1.32
NF1-211ENST00000487476 ATF3P18847 181 aa23.31■■□□□ 1.32
NF1-211ENST00000487476 PANK3Q9H999 370 aa23.31■■□□□ 1.32
NF1-211ENST00000487476 MYOM1P52179 1685 aa23.29■■□□□ 1.32
NF1-211ENST00000487476 USP32Q8NFA0 1604 aa23.29■■□□□ 1.32
NF1-211ENST00000487476 PPIP5K1Q6PFW1 1433 aa23.28■■□□□ 1.32
NF1-211ENST00000487476 FMN2Q9NZ56 1722 aa23.28■■□□□ 1.32
NF1-211ENST00000487476 PMFBP1Q8TBY8 1022 aa23.27■■□□□ 1.32
NF1-211ENST00000487476 CADPS2Q86UW7 1296 aa23.26■■□□□ 1.31
NF1-211ENST00000487476 ORAI2Q96SN7 254 aa23.25■■□□□ 1.31
NF1-211ENST00000487476 DCCP43146 1447 aa23.25■■□□□ 1.31
NF1-211ENST00000487476 ANKARQ7Z5J8 1434 aa23.25■■□□□ 1.31
NF1-211ENST00000487476 CARD14Q9BXL6 1004 aa23.25■■□□□ 1.31
NF1-211ENST00000487476 ESCO1Q5FWF5 840 aa23.24■■□□□ 1.31
NF1-211ENST00000487476 MST1RQ04912 1400 aa23.24■■□□□ 1.31
NF1-211ENST00000487476 RGPD8O14715 1765 aaPredicted RBP23.24■■□□□ 1.31
NF1-211ENST00000487476 C1orf167Q5SNV9 1468 aa23.23■■□□□ 1.31
NF1-211ENST00000487476 CD163L1Q9NR16 1453 aa23.23■■□□□ 1.31
NF1-211ENST00000487476 PELP1Q8IZL8 1130 aaKnown RBP23.23■■□□□ 1.31
NF1-211ENST00000487476 A0A1W2PP64 1363 aa23.22■■□□□ 1.31
NF1-211ENST00000487476 NINLQ9Y2I6 1382 aa23.22■■□□□ 1.31
NF1-211ENST00000487476 PLEKHG3A1L390 1219 aa23.22■■□□□ 1.31
NF1-211ENST00000487476 PER1O15534 1290 aaPredicted RBP23.22■■□□□ 1.31
NF1-211ENST00000487476 ACEP12821 1306 aa23.21■■□□□ 1.31
NF1-211ENST00000487476 SLAIN2Q9P270 581 aa23.2■■□□□ 1.3
NF1-211ENST00000487476 TOPAZ1Q8N9V7 1692 aa23.2■■□□□ 1.3
NF1-211ENST00000487476 ANKRD36BQ8N2N9 1353 aa23.2■■□□□ 1.3
NF1-211ENST00000487476 TERF2IPQ9NYB0 399 aa23.2■■□□□ 1.3
NF1-211ENST00000487476 PHF8Q9UPP1 1060 aa23.2■■□□□ 1.3
NF1-211ENST00000487476 CNGB1Q14028 1251 aaPredicted RBP23.19■■□□□ 1.3
NF1-211ENST00000487476 NGDNQ8NEJ9 315 aaKnown RBP23.18■■□□□ 1.3
NF1-211ENST00000487476 HDGFL2Q7Z4V5 671 aaPredicted RBP23.17■■□□□ 1.3
NF1-211ENST00000487476 CPSF1Q10570 1443 aaKnown RBP23.17■■□□□ 1.3
NF1-211ENST00000487476 NSD3Q9BZ95 1437 aa23.15■■□□□ 1.3
NF1-211ENST00000487476 KTN1Q86UP2 1357 aaKnown RBP23.15■■□□□ 1.3
NF1-211ENST00000487476 FOXO3O43524 673 aa23.15■■□□□ 1.3
NF1-211ENST00000487476 DDX17Q92841 729 aaKnown RBP23.15■■□□□ 1.3
NF1-211ENST00000487476 KNSTRNQ9Y448 316 aa23.15■■□□□ 1.3
NF1-211ENST00000487476 POLR3AO14802 1390 aaPredicted RBP23.14■■□□□ 1.3
NF1-211ENST00000487476 BRINP3Q76B58 766 aa23.13■■□□□ 1.29
NF1-211ENST00000487476 CERKQ8TCT0 537 aa23.13■■□□□ 1.29
NF1-211ENST00000487476 ITSN1Q15811 1721 aa23.13■■□□□ 1.29
NF1-211ENST00000487476 XPCQ01831 940 aaPredicted RBP23.12■■□□□ 1.29
NF1-211ENST00000487476 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.12■■□□□ 1.292e-6■□□□□ 9
NF1-211ENST00000487476 ZNF692Q9BU19 519 aaPredicted RBP23.12■■□□□ 1.29
NF1-211ENST00000487476 CENPBP07199 599 aaPredicted RBP23.11■■□□□ 1.29
NF1-211ENST00000487476 AMER1Q5JTC6 1135 aaPredicted RBP23.11■■□□□ 1.29
NF1-211ENST00000487476 CC2D1BQ5T0F9 858 aaKnown RBP23.1■■□□□ 1.29
NF1-211ENST00000487476 USP6P35125 1406 aa23.09■■□□□ 1.29
NF1-211ENST00000487476 PSME1Q06323 249 aa23.08■■□□□ 1.29
NF1-211ENST00000487476 AKAP12Q02952 1782 aa23.06■■□□□ 1.28
NF1-211ENST00000487476 EDC4Q6P2E9 1401 aaKnown RBP23.06■■□□□ 1.28
NF1-211ENST00000487476 TTC21BQ7Z4L5 1316 aa23.06■■□□□ 1.28
NF1-211ENST00000487476 UBAP1LF5GYI3 381 aa23.06■■□□□ 1.28
NF1-211ENST00000487476 SSH2Q76I76 1423 aa23.05■■□□□ 1.28
NF1-211ENST00000487476 FYB1O15117 783 aa23.05■■□□□ 1.28
NF1-211ENST00000487476 NME9Q86XW9 330 aa23.05■■□□□ 1.28
NF1-211ENST00000487476 ZRANB1Q9UGI0 708 aa23.05■■□□□ 1.28
NF1-211ENST00000487476 CGNL1Q0VF96 1302 aa23.05■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms