RNA–Protein interactions for RNA: ENST00000487169.5

HDLBP-241, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 4,339 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-241ENST00000487169 ROCK1Q13464 1354 aa16.39■□□□□ 0.21
HDLBP-241ENST00000487169 H3BQV1 296 aa16.38■□□□□ 0.21
HDLBP-241ENST00000487169 IFFO2Q5TF58 517 aa16.38■□□□□ 0.21
HDLBP-241ENST00000487169 CPLX2Q6PUV4 134 aaKnown RBP16.38■□□□□ 0.21
HDLBP-241ENST00000487169 PLEKHH2Q8IVE3 1493 aa16.38■□□□□ 0.21
HDLBP-241ENST00000487169 IL27Q8NEV9 243 aa16.38■□□□□ 0.21
HDLBP-241ENST00000487169 APPP05067 770 aa16.38■□□□□ 0.21
HDLBP-241ENST00000487169 CDK19Q9BWU1 502 aa16.37■□□□□ 0.21
HDLBP-241ENST00000487169 MARCH6O60337 910 aa16.37■□□□□ 0.21
HDLBP-241ENST00000487169 TPM4P67936 248 aa16.36■□□□□ 0.21
HDLBP-241ENST00000487169 HSP90AB4PQ58FF6 505 aa16.36■□□□□ 0.21
HDLBP-241ENST00000487169 AEBP2Q6ZN18 517 aaPredicted RBP16.36■□□□□ 0.21
HDLBP-241ENST00000487169 GAS2L2Q8NHY3 880 aa16.36■□□□□ 0.21
HDLBP-241ENST00000487169 NCBP3Q53F19 620 aaKnown RBP16.36■□□□□ 0.21
HDLBP-241ENST00000487169 MEX3CQ5U5Q3 659 aaKnown RBP16.36■□□□□ 0.21
HDLBP-241ENST00000487169 VPS37DQ86XT2 251 aa16.36■□□□□ 0.21
HDLBP-241ENST00000487169 DDX49Q9Y6V7 483 aaKnown RBP16.36■□□□□ 0.21
HDLBP-241ENST00000487169 AKAP17AQ02040 695 aaKnown RBP16.36■□□□□ 0.21
HDLBP-241ENST00000487169 CHMP4CQ96CF2 233 aa16.35■□□□□ 0.21
HDLBP-241ENST00000487169 UBTFL1P0CB47 393 aaPredicted RBP16.35■□□□□ 0.21
HDLBP-241ENST00000487169 CREBRFQ8IUR6 639 aa16.35■□□□□ 0.21
HDLBP-241ENST00000487169 ATP6V1DQ9Y5K8 247 aa16.35■□□□□ 0.21
HDLBP-241ENST00000487169 EXOSC9Q06265 439 aaKnown RBP16.35■□□□□ 0.21
HDLBP-241ENST00000487169 SULT6B1Q6IMI4 303 aa16.35■□□□□ 0.21
HDLBP-241ENST00000487169 SYNE3Q6ZMZ3 975 aa16.35■□□□□ 0.21
HDLBP-241ENST00000487169 KIAA0586Q9BVV6 1533 aa16.35■□□□□ 0.21
HDLBP-241ENST00000487169 ZNF692Q9BU19 519 aaPredicted RBP16.34■□□□□ 0.21
HDLBP-241ENST00000487169 NEUROD6Q96NK8 337 aa16.33■□□□□ 0.21
HDLBP-241ENST00000487169 EHBP1L1Q8N3D4 1523 aa16.33■□□□□ 0.2
HDLBP-241ENST00000487169 MCTP1Q6DN14 999 aa16.33■□□□□ 0.2
HDLBP-241ENST00000487169 CCDC184Q52MB2 194 aa16.33■□□□□ 0.2
HDLBP-241ENST00000487169 PLEKHO1Q53GL0 409 aaPredicted RBP16.32■□□□□ 0.2
HDLBP-241ENST00000487169 VPS53Q5VIR6 699 aa16.32■□□□□ 0.2
HDLBP-241ENST00000487169 PCF11O94913 1555 aaKnown RBP16.32■□□□□ 0.2
HDLBP-241ENST00000487169 NOL10Q9BSC4 688 aaKnown RBP16.32■□□□□ 0.2
HDLBP-241ENST00000487169 ANKLE2Q86XL3 938 aa16.31■□□□□ 0.2
HDLBP-241ENST00000487169 MAPKBP1O60336 1514 aa16.31■□□□□ 0.2
HDLBP-241ENST00000487169 MAP3K1Q13233 1512 aa16.31■□□□□ 0.2
HDLBP-241ENST00000487169 DDX11L8A8MPP1 907 aa16.31■□□□□ 0.2
HDLBP-241ENST00000487169 CPLX1O14810 134 aa16.31■□□□□ 0.2
HDLBP-241ENST00000487169 TRDNQ13061 729 aa16.31■□□□□ 0.2
HDLBP-241ENST00000487169 RNF20Q5VTR2 975 aa16.31■□□□□ 0.2
HDLBP-241ENST00000487169 STRN4Q9NRL3 753 aa16.31■□□□□ 0.2
HDLBP-241ENST00000487169 PHF14O94880 888 aa16.31■□□□□ 0.2
HDLBP-241ENST00000487169 AAMPQ13685 434 aa16.31■□□□□ 0.2
HDLBP-241ENST00000487169 TWISTNBQ3B726 338 aaPredicted RBP16.31■□□□□ 0.2
HDLBP-241ENST00000487169 ERC2O15083 957 aa16.3■□□□□ 0.2
HDLBP-241ENST00000487169 GNAI3P08754 354 aa16.3■□□□□ 0.2
HDLBP-241ENST00000487169 CCDC30Q5VVM6 783 aa16.3■□□□□ 0.2
HDLBP-241ENST00000487169 TSR2Q969E8 191 aaKnown RBP16.3■□□□□ 0.2
HDLBP-241ENST00000487169 DAPK1P53355 1430 aa16.3■□□□□ 0.2
HDLBP-241ENST00000487169 ANKRD30BQ9BXX2 1392 aa16.3■□□□□ 0.2
HDLBP-241ENST00000487169 SURF6O75683 361 aaKnown RBP16.29■□□□□ 0.2
HDLBP-241ENST00000487169 PNISRQ8TF01 805 aaKnown RBP16.29■□□□□ 0.2
HDLBP-241ENST00000487169 INTS3Q68E01 1043 aaKnown RBP16.29■□□□□ 0.2
HDLBP-241ENST00000487169 CLASRPQ8N2M8 674 aaKnown RBP16.29■□□□□ 0.2
HDLBP-241ENST00000487169 RAD21O60216 631 aa16.28■□□□□ 0.2
HDLBP-241ENST00000487169 AMOTL1Q8IY63 956 aa16.28■□□□□ 0.2
HDLBP-241ENST00000487169 RPGRIP1LQ68CZ1 1315 aa16.28■□□□□ 0.2
HDLBP-241ENST00000487169 CCDC61Q9Y6R9 512 aa16.28■□□□□ 0.2
HDLBP-241ENST00000487169 EPRSP07814 1512 aaKnown RBP16.28■□□□□ 0.2
HDLBP-241ENST00000487169 URB2Q14146 1524 aaKnown RBP16.28■□□□□ 0.2
HDLBP-241ENST00000487169 HDGFL1Q5TGJ6 251 aa16.27■□□□□ 0.2
HDLBP-241ENST00000487169 CDK13Q14004 1512 aaKnown RBP16.27■□□□□ 0.2
HDLBP-241ENST00000487169 TATP17735 454 aaPredicted RBP16.26■□□□□ 0.19
HDLBP-241ENST00000487169 RTEL1-TNFRSF6BF6WH68 1400 aa16.26■□□□□ 0.19
HDLBP-241ENST00000487169 NAIPQ13075 1403 aa16.26■□□□□ 0.19
HDLBP-241ENST00000487169 ERBINQ96RT1 1412 aa16.26■□□□□ 0.19
HDLBP-241ENST00000487169 FAM177BA6PVY3 158 aa16.26■□□□□ 0.19
HDLBP-241ENST00000487169 ZNF530Q6P9A1 599 aaPredicted RBP16.26■□□□□ 0.19
HDLBP-241ENST00000487169 RBM42Q9BTD8 480 aaKnown RBP16.26■□□□□ 0.19
HDLBP-241ENST00000487169 C22orf23Q9BZE7 217 aa16.25■□□□□ 0.19
HDLBP-241ENST00000487169 BECN2A8MW95 431 aa16.25■□□□□ 0.19
HDLBP-241ENST00000487169 PES1O00541 588 aaKnown RBP16.25■□□□□ 0.19
HDLBP-241ENST00000487169 SLC4A2P04920 1241 aa16.25■□□□□ 0.19
HDLBP-241ENST00000487169 WASHC4Q2M389 1173 aa16.25■□□□□ 0.19
HDLBP-241ENST00000487169 TRIM29Q14134 588 aa16.24■□□□□ 0.19
HDLBP-241ENST00000487169 RBM33Q96EV2 1170 aaKnown RBP16.24■□□□□ 0.19
HDLBP-241ENST00000487169 PRDM11Q9NQV5 511 aa16.24■□□□□ 0.19
HDLBP-241ENST00000487169 DHX16O60231 1041 aaKnown RBP16.24■□□□□ 0.19
HDLBP-241ENST00000487169 BCAR3O75815 825 aa16.24■□□□□ 0.19
HDLBP-241ENST00000487169 RRS1Q15050 365 aaKnown RBP16.24■□□□□ 0.19
HDLBP-241ENST00000487169 TOM1L2Q6ZVM7 507 aa16.24■□□□□ 0.19
HDLBP-241ENST00000487169 VPS37CA5D8V6 355 aaPredicted RBP16.23■□□□□ 0.19
HDLBP-241ENST00000487169 CHMP5Q9NZZ3 219 aa16.23■□□□□ 0.19
HDLBP-241ENST00000487169 ARHGEF11O15085 1522 aa16.23■□□□□ 0.19
HDLBP-241ENST00000487169 PDE3AQ14432 1141 aa16.23■□□□□ 0.19
HDLBP-241ENST00000487169 FBXW7Q969H0 707 aa16.23■□□□□ 0.19
HDLBP-241ENST00000487169 DDX54Q8TDD1 881 aaKnown RBP16.23■□□□□ 0.19
HDLBP-241ENST00000487169 TRIM34Q9BYJ4 488 aa16.23■□□□□ 0.19
HDLBP-241ENST00000487169 HECW1Q76N89 1606 aa16.23■□□□□ 0.19
HDLBP-241ENST00000487169 LAMC3Q9Y6N6 1575 aa16.23■□□□□ 0.19
HDLBP-241ENST00000487169 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.22■□□□□ 0.19
HDLBP-241ENST00000487169 RALYLQ86SE5 291 aaKnown RBP16.22■□□□□ 0.19
HDLBP-241ENST00000487169 PLB1Q6P1J6 1458 aa16.22■□□□□ 0.19
HDLBP-241ENST00000487169 ATAD2Q6PL18 1390 aa16.22■□□□□ 0.19
HDLBP-241ENST00000487169 GOLGA6L19H0YKK7 550 aa16.22■□□□□ 0.19
HDLBP-241ENST00000487169 XPCQ01831 940 aaPredicted RBP16.22■□□□□ 0.19
HDLBP-241ENST00000487169 SKOR2Q2VWA4 1001 aaPredicted RBP16.22■□□□□ 0.19
HDLBP-241ENST00000487169 C1orf115Q9H7X2 142 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms