RNA–Protein interactions for RNA: ENST00000486308.1

APH1A-207, Transcript of aph-1 homolog A, gamma-secretase subunit, humanhuman

TSL 3

Gene APH1A, Length 574 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APH1A-207ENST00000486308 SLAIN2Q9P270 581 aa10.71□□□□□ -0.69
APH1A-207ENST00000486308 ROBO1Q9Y6N7 1651 aa10.71□□□□□ -0.69
APH1A-207ENST00000486308 TRPM1Q7Z4N2 1603 aa10.7□□□□□ -0.7
APH1A-207ENST00000486308 NBPF8Q3BBV2 869 aa10.7□□□□□ -0.7
APH1A-207ENST00000486308 PRAM1Q96QH2 718 aa10.7□□□□□ -0.7
APH1A-207ENST00000486308 TRAK1Q9UPV9 953 aa10.7□□□□□ -0.7
APH1A-207ENST00000486308 HSPA1LP34931 641 aa10.69□□□□□ -0.7
APH1A-207ENST00000486308 ARHGEF28Q8N1W1 1705 aaKnown RBP10.69□□□□□ -0.7
APH1A-207ENST00000486308 C1orf167Q5SNV9 1468 aa10.68□□□□□ -0.7
APH1A-207ENST00000486308 GPRASP1Q5JY77 1395 aa10.67□□□□□ -0.7
APH1A-207ENST00000486308 SAFB2Q14151 953 aaKnown RBP eCLIP10.67□□□□□ -0.7
APH1A-207ENST00000486308 BRINP3Q76B58 766 aa10.67□□□□□ -0.7
APH1A-207ENST00000486308 CCER1Q8TC90 406 aaPredicted RBP10.67□□□□□ -0.7
APH1A-207ENST00000486308 POGKQ9P215 609 aa10.67□□□□□ -0.7
APH1A-207ENST00000486308 ADGRB2O60241 1585 aa10.67□□□□□ -0.7
APH1A-207ENST00000486308 RALGAPBQ86X10 1494 aa10.67□□□□□ -0.7
APH1A-207ENST00000486308 ROCK2O75116 1388 aaKnown RBP10.66□□□□□ -0.7
APH1A-207ENST00000486308 AHDC1Q5TGY3 1603 aaPredicted RBP10.66□□□□□ -0.7
APH1A-207ENST00000486308 FMN2Q9NZ56 1722 aa10.65□□□□□ -0.7
APH1A-207ENST00000486308 TIMELESSQ9UNS1 1208 aa10.64□□□□□ -0.71
APH1A-207ENST00000486308 MINK1Q8N4C8 1332 aaPredicted RBP10.63□□□□□ -0.71
APH1A-207ENST00000486308 COL16A1Q07092 1604 aaPredicted RBP10.63□□□□□ -0.71
APH1A-207ENST00000486308 NHSL1Q5SYE7 1610 aa10.63□□□□□ -0.71
APH1A-207ENST00000486308 ORAI2Q96SN7 254 aa10.63□□□□□ -0.71
APH1A-207ENST00000486308 HIRIP3Q9BW71 556 aaPredicted RBP10.63□□□□□ -0.71
APH1A-207ENST00000486308 PHLPP1O60346 1717 aa10.63□□□□□ -0.71
APH1A-207ENST00000486308 CENPJQ9HC77 1338 aaPredicted RBP10.62□□□□□ -0.71
APH1A-207ENST00000486308 NUTM2FA1L443 756 aa10.62□□□□□ -0.71
APH1A-207ENST00000486308 ANKARQ7Z5J8 1434 aa10.61□□□□□ -0.71
APH1A-207ENST00000486308 WASLO00401 505 aaPredicted RBP10.61□□□□□ -0.71
APH1A-207ENST00000486308 DDX17Q92841 729 aaKnown RBP10.61□□□□□ -0.71
APH1A-207ENST00000486308 CARD11Q9BXL7 1154 aa10.61□□□□□ -0.71
APH1A-207ENST00000486308 TULP4Q9NRJ4 1543 aa10.61□□□□□ -0.71
APH1A-207ENST00000486308 USP32Q8NFA0 1604 aa10.61□□□□□ -0.71
APH1A-207ENST00000486308 QRICH2Q9H0J4 1663 aa10.6□□□□□ -0.71
APH1A-207ENST00000486308 ESCO1Q5FWF5 840 aa10.6□□□□□ -0.71
APH1A-207ENST00000486308 EIF3AQ14152 1382 aaKnown RBP10.6□□□□□ -0.71
APH1A-207ENST00000486308 PRR36Q9H6K5 1346 aa10.59□□□□□ -0.71
APH1A-207ENST00000486308 ATP7BP35670 1465 aa10.59□□□□□ -0.71
APH1A-207ENST00000486308 KIF1AQ12756 1690 aa10.58□□□□□ -0.72
APH1A-207ENST00000486308 PXDNQ92626 1479 aa10.58□□□□□ -0.72
APH1A-207ENST00000486308 SOS2Q07890 1332 aaPredicted RBP10.58□□□□□ -0.72
APH1A-207ENST00000486308 RGPD8O14715 1765 aaPredicted RBP10.57□□□□□ -0.72
APH1A-207ENST00000486308 JCADQ9P266 1359 aa10.57□□□□□ -0.72
APH1A-207ENST00000486308 SBNO2Q9Y2G9 1366 aa10.57□□□□□ -0.72
APH1A-207ENST00000486308 CDK19Q9BWU1 502 aa10.57□□□□□ -0.72
APH1A-207ENST00000486308 PHF8Q9UPP1 1060 aa10.57□□□□□ -0.72
APH1A-207ENST00000486308 NPHP3Q7Z494 1330 aa10.57□□□□□ -0.72
APH1A-207ENST00000486308 FOXO3O43524 673 aa10.56□□□□□ -0.72
APH1A-207ENST00000486308 SHPRHQ149N8 1683 aa10.56□□□□□ -0.72
APH1A-207ENST00000486308 TOPAZ1Q8N9V7 1692 aa10.56□□□□□ -0.72
APH1A-207ENST00000486308 MED1Q15648 1581 aaPredicted RBP10.56□□□□□ -0.72
APH1A-207ENST00000486308 LRRC59Q96AG4 307 aaKnown RBP10.55□□□□□ -0.72
APH1A-207ENST00000486308 NUDT16Q96DE0 195 aaKnown RBP10.55□□□□□ -0.72
APH1A-207ENST00000486308 PNPLA6Q8IY17 1366 aa10.54□□□□□ -0.72
APH1A-207ENST00000486308 XPCQ01831 940 aaPredicted RBP10.54□□□□□ -0.72
APH1A-207ENST00000486308 ITSN1Q15811 1721 aa10.54□□□□□ -0.72
APH1A-207ENST00000486308 PMFBP1Q8TBY8 1022 aa10.54□□□□□ -0.72
APH1A-207ENST00000486308 CABP2Q9NPB3 220 aa10.54□□□□□ -0.72
APH1A-207ENST00000486308 USP47Q96K76 1375 aa10.53□□□□□ -0.72
APH1A-207ENST00000486308 SRPK2P78362 688 aaKnown RBP10.53□□□□□ -0.72
APH1A-207ENST00000486308 EVC2Q86UK5 1308 aa10.53□□□□□ -0.72
APH1A-207ENST00000486308 LRP6O75581 1613 aa10.52□□□□□ -0.73
APH1A-207ENST00000486308 ST20-MTHFSA0A0A6YYL1 179 aa10.52□□□□□ -0.73
APH1A-207ENST00000486308 KRT28Q7Z3Y7 464 aa10.52□□□□□ -0.73
APH1A-207ENST00000486308 TESK2Q96S53 571 aa10.52□□□□□ -0.73
APH1A-207ENST00000486308 CCDC61Q9Y6R9 512 aa10.52□□□□□ -0.73
APH1A-207ENST00000486308 SPATA31A6Q5VVP1 1343 aa10.52□□□□□ -0.73
APH1A-207ENST00000486308 POLR3AO14802 1390 aaPredicted RBP10.52□□□□□ -0.73
APH1A-207ENST00000486308 PPIP5K1Q6PFW1 1433 aa10.51□□□□□ -0.73
APH1A-207ENST00000486308 PLEKHG3A1L390 1219 aa10.51□□□□□ -0.73
APH1A-207ENST00000486308 SPATA31A3Q5VYP0 1347 aa10.51□□□□□ -0.73
APH1A-207ENST00000486308 SBNO1A3KN83 1393 aa10.51□□□□□ -0.73
APH1A-207ENST00000486308 COL22A1Q8NFW1 1626 aaPredicted RBP10.51□□□□□ -0.73
APH1A-207ENST00000486308 TNS3Q68CZ2 1445 aa10.5□□□□□ -0.73
APH1A-207ENST00000486308 TRPM3Q9HCF6 1732 aaPredicted RBP10.5□□□□□ -0.73
APH1A-207ENST00000486308 PSME1Q06323 249 aa10.5□□□□□ -0.73
APH1A-207ENST00000486308 NGDNQ8NEJ9 315 aaKnown RBP10.5□□□□□ -0.73
APH1A-207ENST00000486308 ACEP12821 1306 aa10.49□□□□□ -0.73
APH1A-207ENST00000486308 ATAD2Q6PL18 1390 aa10.49□□□□□ -0.73
APH1A-207ENST00000486308 DISP3Q9P2K9 1392 aa10.49□□□□□ -0.73
APH1A-207ENST00000486308 CABP1Q9NZU7 370 aa10.48□□□□□ -0.73
APH1A-207ENST00000486308 ALS2Q96Q42 1657 aa10.47□□□□□ -0.73
APH1A-207ENST00000486308 NUTM2BA6NNL0 878 aaPredicted RBP10.47□□□□□ -0.73
APH1A-207ENST00000486308 NUTM2EB1AL46 878 aaPredicted RBP10.47□□□□□ -0.73
APH1A-207ENST00000486308 NUTM2AQ8IVF1 878 aaPredicted RBP10.47□□□□□ -0.73
APH1A-207ENST00000486308 PUS7Q96PZ0 661 aaKnown RBP10.47□□□□□ -0.73
APH1A-207ENST00000486308 ARHGEF10O15013 1369 aa10.47□□□□□ -0.73
APH1A-207ENST00000486308 SLC24A1O60721 1099 aa10.46□□□□□ -0.73
APH1A-207ENST00000486308 CD163L1Q9NR16 1453 aa10.45□□□□□ -0.74
APH1A-207ENST00000486308 USP6P35125 1406 aa10.45□□□□□ -0.74
APH1A-207ENST00000486308 CPSF1Q10570 1443 aaKnown RBP10.45□□□□□ -0.74
APH1A-207ENST00000486308 SSH2Q76I76 1423 aa10.45□□□□□ -0.74
APH1A-207ENST00000486308 TMF1P82094 1093 aa10.45□□□□□ -0.74
APH1A-207ENST00000486308 RGS17Q9UGC6 210 aaPredicted RBP10.45□□□□□ -0.74
APH1A-207ENST00000486308 BRD4O60885 1362 aaPredicted RBP10.44□□□□□ -0.74
APH1A-207ENST00000486308 HSPA5P11021 654 aaKnown RBP10.44□□□□□ -0.74
APH1A-207ENST00000486308 EIF4G2P78344 907 aaKnown RBP eCLIP10.44□□□□□ -0.74
APH1A-207ENST00000486308 MEX3CQ5U5Q3 659 aaKnown RBP10.44□□□□□ -0.74
APH1A-207ENST00000486308 LMOD2Q6P5Q4 547 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms