RNA–Protein interactions for RNA: ENST00000485820.1

YIF1A-208, Transcript of Yip1 interacting factor homolog A, membrane trafficking protein, humanhuman

TSL 2

Gene YIF1A, Length 653 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIF1A-208ENST00000485820 SIN3AQ96ST3 1273 aa21.77■■□□□ 1.08
YIF1A-208ENST00000485820 ADGRB1O14514 1584 aa21.77■■□□□ 1.08
YIF1A-208ENST00000485820 JCADQ9P266 1359 aa21.75■■□□□ 1.07
YIF1A-208ENST00000485820 DDX17Q92841 729 aaKnown RBP21.75■■□□□ 1.07
YIF1A-208ENST00000485820 CDC42BPGQ6DT37 1551 aa21.74■■□□□ 1.07
YIF1A-208ENST00000485820 PRAM1Q96QH2 718 aa21.73■■□□□ 1.07
YIF1A-208ENST00000485820 TRAK1Q9UPV9 953 aa21.73■■□□□ 1.07
YIF1A-208ENST00000485820 NHSL1Q5SYE7 1610 aa21.73■■□□□ 1.07
YIF1A-208ENST00000485820 DLC1Q96QB1 1528 aa21.72■■□□□ 1.07
YIF1A-208ENST00000485820 L3MBTL2Q969R5 705 aa21.71■■□□□ 1.07
YIF1A-208ENST00000485820 NUTM2FA1L443 756 aa21.69■■□□□ 1.06
YIF1A-208ENST00000485820 NEUROD1Q13562 356 aa21.69■■□□□ 1.06
YIF1A-208ENST00000485820 SAFB2Q14151 953 aaKnown RBP eCLIP21.69■■□□□ 1.06
YIF1A-208ENST00000485820 ESCO1Q5FWF5 840 aa21.69■■□□□ 1.06
YIF1A-208ENST00000485820 LRRC59Q96AG4 307 aaKnown RBP21.69■■□□□ 1.06
YIF1A-208ENST00000485820 POGKQ9P215 609 aa21.69■■□□□ 1.06
YIF1A-208ENST00000485820 RGS17Q9UGC6 210 aaPredicted RBP21.69■■□□□ 1.06
YIF1A-208ENST00000485820 PHF23Q9BUL5 403 aaPredicted RBP21.68■■□□□ 1.06
YIF1A-208ENST00000485820 SOS2Q07890 1332 aaPredicted RBP21.66■■□□□ 1.06
YIF1A-208ENST00000485820 SPATA31A6Q5VVP1 1343 aa21.66■■□□□ 1.06
YIF1A-208ENST00000485820 NBPF1Q3BBV0 1214 aa21.66■■□□□ 1.06
YIF1A-208ENST00000485820 FMN2Q9NZ56 1722 aa21.66■■□□□ 1.06
YIF1A-208ENST00000485820 KIAA1210Q9ULL0 1709 aa21.66■■□□□ 1.06
YIF1A-208ENST00000485820 SHPRHQ149N8 1683 aa21.66■■□□□ 1.06
YIF1A-208ENST00000485820 RGPD8O14715 1765 aaPredicted RBP21.64■■□□□ 1.05
YIF1A-208ENST00000485820 FOXO3O43524 673 aa21.63■■□□□ 1.05
YIF1A-208ENST00000485820 MINK1Q8N4C8 1332 aaPredicted RBP21.6■■□□□ 1.05
YIF1A-208ENST00000485820 LRP6O75581 1613 aa21.6■■□□□ 1.05
YIF1A-208ENST00000485820 HIRIP3Q9BW71 556 aaPredicted RBP21.6■■□□□ 1.05
YIF1A-208ENST00000485820 PNPLA6Q8IY17 1366 aa21.6■■□□□ 1.05
YIF1A-208ENST00000485820 NPHP3Q7Z494 1330 aa21.59■■□□□ 1.05
YIF1A-208ENST00000485820 ARHGEF28Q8N1W1 1705 aaKnown RBP21.59■■□□□ 1.05
YIF1A-208ENST00000485820 NUTM2BA6NNL0 878 aaPredicted RBP21.58■■□□□ 1.05
YIF1A-208ENST00000485820 NUTM2EB1AL46 878 aaPredicted RBP21.58■■□□□ 1.05
YIF1A-208ENST00000485820 NUTM2AQ8IVF1 878 aaPredicted RBP21.58■■□□□ 1.05
YIF1A-208ENST00000485820 ADGRB2O60241 1585 aa21.57■■□□□ 1.04
YIF1A-208ENST00000485820 WASLO00401 505 aaPredicted RBP21.56■■□□□ 1.04
YIF1A-208ENST00000485820 XPCQ01831 940 aaPredicted RBP21.56■■□□□ 1.04
YIF1A-208ENST00000485820 PHF8Q9UPP1 1060 aa21.56■■□□□ 1.04
YIF1A-208ENST00000485820 PXDNQ92626 1479 aa21.56■■□□□ 1.04
YIF1A-208ENST00000485820 POTEAQ6S8J7 498 aa21.55■■□□□ 1.04
YIF1A-208ENST00000485820 USP32Q8NFA0 1604 aa21.55■■□□□ 1.04
YIF1A-208ENST00000485820 SOCS7O14512 581 aa21.54■■□□□ 1.04
YIF1A-208ENST00000485820 ANKARQ7Z5J8 1434 aa21.54■■□□□ 1.04
YIF1A-208ENST00000485820 NBPF8Q3BBV2 869 aa21.53■■□□□ 1.04
YIF1A-208ENST00000485820 MEX3CQ5U5Q3 659 aaKnown RBP21.53■■□□□ 1.04
YIF1A-208ENST00000485820 KIF1AQ12756 1690 aa21.53■■□□□ 1.04
YIF1A-208ENST00000485820 PRR36Q9H6K5 1346 aa21.53■■□□□ 1.04
YIF1A-208ENST00000485820 KRT28Q7Z3Y7 464 aa21.52■■□□□ 1.04
YIF1A-208ENST00000485820 TRPM1Q7Z4N2 1603 aa21.51■■□□□ 1.03
YIF1A-208ENST00000485820 PMFBP1Q8TBY8 1022 aa21.5■■□□□ 1.03
YIF1A-208ENST00000485820 CDK19Q9BWU1 502 aa21.49■■□□□ 1.03
YIF1A-208ENST00000485820 SPATA31A3Q5VYP0 1347 aa21.49■■□□□ 1.03
YIF1A-208ENST00000485820 EIF3AQ14152 1382 aaKnown RBP21.48■■□□□ 1.03
YIF1A-208ENST00000485820 PSME1Q06323 249 aa21.48■■□□□ 1.03
YIF1A-208ENST00000485820 TULP4Q9NRJ4 1543 aa21.48■■□□□ 1.03
YIF1A-208ENST00000485820 COL22A1Q8NFW1 1626 aaPredicted RBP21.47■■□□□ 1.03
YIF1A-208ENST00000485820 NUDT16Q96DE0 195 aaKnown RBP21.47■■□□□ 1.03
YIF1A-208ENST00000485820 PCGF6Q9BYE7 350 aa21.47■■□□□ 1.03
YIF1A-208ENST00000485820 CENPJQ9HC77 1338 aaPredicted RBP21.46■■□□□ 1.03
YIF1A-208ENST00000485820 ADAMTS2O95450 1211 aa21.45■■□□□ 1.02
YIF1A-208ENST00000485820 ZNF772Q68DY9 489 aaPredicted RBP21.45■■□□□ 1.02
YIF1A-208ENST00000485820 TONSLQ96HA7 1378 aa21.45■■□□□ 1.02
YIF1A-208ENST00000485820 ROCK2O75116 1388 aaKnown RBP21.44■■□□□ 1.02
YIF1A-208ENST00000485820 C8orf37Q96NL8 207 aa21.43■■□□□ 1.02
YIF1A-208ENST00000485820 AFF2P51816 1311 aa21.43■■□□□ 1.02
YIF1A-208ENST00000485820 SBNO1A3KN83 1393 aa21.43■■□□□ 1.02
YIF1A-208ENST00000485820 ATP7BP35670 1465 aa21.41■■□□□ 1.02
YIF1A-208ENST00000485820 GPRASP1Q5JY77 1395 aa21.41■■□□□ 1.02
YIF1A-208ENST00000485820 NGLY1Q96IV0 654 aa21.41■■□□□ 1.02
YIF1A-208ENST00000485820 CCDC61Q9Y6R9 512 aa21.41■■□□□ 1.02
YIF1A-208ENST00000485820 NGDNQ8NEJ9 315 aaKnown RBP21.4■■□□□ 1.02
YIF1A-208ENST00000485820 TNS3Q68CZ2 1445 aa21.39■■□□□ 1.02
YIF1A-208ENST00000485820 QRICH2Q9H0J4 1663 aa21.39■■□□□ 1.01
YIF1A-208ENST00000485820 PLEKHG3A1L390 1219 aa21.38■■□□□ 1.01
YIF1A-208ENST00000485820 ITSN1Q15811 1721 aa21.38■■□□□ 1.01
YIF1A-208ENST00000485820 FNBP4Q8N3X1 1017 aaPredicted RBP21.37■■□□□ 1.01
YIF1A-208ENST00000485820 CABP2Q9NPB3 220 aa21.37■■□□□ 1.01
YIF1A-208ENST00000485820 TRPM3Q9HCF6 1732 aaPredicted RBP21.37■■□□□ 1.01
YIF1A-208ENST00000485820 SRPK2P78362 688 aaKnown RBP21.36■■□□□ 1.01
YIF1A-208ENST00000485820 LMOD2Q6P5Q4 547 aa21.36■■□□□ 1.01
YIF1A-208ENST00000485820 CABLES1Q8TDN4 633 aa21.36■■□□□ 1.01
YIF1A-208ENST00000485820 CARD11Q9BXL7 1154 aa21.36■■□□□ 1.01
YIF1A-208ENST00000485820 MARF1Q9Y4F3 1742 aaKnown RBP21.35■■□□□ 1.01
YIF1A-208ENST00000485820 QTRT2Q9H974 415 aaKnown RBP21.35■■□□□ 1.01
YIF1A-208ENST00000485820 ARHGEF10O15013 1369 aa21.35■■□□□ 1.01
YIF1A-208ENST00000485820 TOPAZ1Q8N9V7 1692 aa21.34■■□□□ 1.01
YIF1A-208ENST00000485820 ACEP12821 1306 aa21.34■■□□□ 1.01
YIF1A-208ENST00000485820 POLR3AO14802 1390 aaPredicted RBP21.34■■□□□ 1.01
YIF1A-208ENST00000485820 RALGAPBQ86X10 1494 aa21.33■■□□□ 1.01
YIF1A-208ENST00000485820 RXRBP28702 533 aa21.33■■□□□ 1.01
YIF1A-208ENST00000485820 USP21Q9UK80 565 aa21.33■■□□□ 1.01
YIF1A-208ENST00000485820 EVC2Q86UK5 1308 aa21.32■■□□□ 1
YIF1A-208ENST00000485820 ALS2Q96Q42 1657 aa21.32■■□□□ 1
YIF1A-208ENST00000485820 CLSPNQ9HAW4 1339 aa21.31■■□□□ 1
YIF1A-208ENST00000485820 PAK3O75914 559 aaPredicted RBP21.3■■□□□ 1
YIF1A-208ENST00000485820 PLEKHG5O94827 1062 aa21.3■■□□□ 1
YIF1A-208ENST00000485820 PPIP5K1Q6PFW1 1433 aa21.29■■□□□ 1
YIF1A-208ENST00000485820 BCL9LQ86UU0 1499 aa21.29■■□□□ 1
YIF1A-208ENST00000485820 CABP1Q9NZU7 370 aa21.29■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms