RNA–Protein interactions for RNA: ENST00000485479.5

APTX-227, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,986 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-227ENST00000485479 PHF23Q9BUL5 403 aaPredicted RBP16.93■□□□□ 0.3
APTX-227ENST00000485479 C19orf44Q9H6X5 657 aa16.92■□□□□ 0.3
APTX-227ENST00000485479 DLC1Q96QB1 1528 aa16.92■□□□□ 0.3
APTX-227ENST00000485479 FAM135BQ49AJ0 1406 aa16.91■□□□□ 0.3
APTX-227ENST00000485479 ATF3P18847 181 aa16.9■□□□□ 0.3
APTX-227ENST00000485479 TOM1O60784 492 aa16.89■□□□□ 0.3
APTX-227ENST00000485479 TIMELESSQ9UNS1 1208 aa16.89■□□□□ 0.3
APTX-227ENST00000485479 GPRASP1Q5JY77 1395 aa16.89■□□□□ 0.29
APTX-227ENST00000485479 FBXO41Q8TF61 875 aa16.88■□□□□ 0.29
APTX-227ENST00000485479 QRICH2Q9H0J4 1663 aa16.88■□□□□ 0.29
APTX-227ENST00000485479 NCOA3Q9Y6Q9 1424 aa16.88■□□□□ 0.29
APTX-227ENST00000485479 ILDR1Q86SU0 546 aaPredicted RBP16.88■□□□□ 0.29
APTX-227ENST00000485479 SLAIN2Q9P270 581 aa16.87■□□□□ 0.29
APTX-227ENST00000485479 CENPJQ9HC77 1338 aaPredicted RBP16.87■□□□□ 0.29
APTX-227ENST00000485479 CADPS2Q86UW7 1296 aa16.86■□□□□ 0.29
APTX-227ENST00000485479 MST1RQ04912 1400 aa16.86■□□□□ 0.29
APTX-227ENST00000485479 ROBO1Q9Y6N7 1651 aa16.86■□□□□ 0.29
APTX-227ENST00000485479 CDC42BPGQ6DT37 1551 aa16.85■□□□□ 0.29
APTX-227ENST00000485479 RGPD8O14715 1765 aaPredicted RBP16.85■□□□□ 0.29
APTX-227ENST00000485479 SIRT1Q96EB6 747 aa16.85■□□□□ 0.29
APTX-227ENST00000485479 DDX17Q92841 729 aaKnown RBP16.84■□□□□ 0.29
APTX-227ENST00000485479 DCCP43146 1447 aa16.84■□□□□ 0.29
APTX-227ENST00000485479 ORAI2Q96SN7 254 aa16.84■□□□□ 0.29
APTX-227ENST00000485479 FMN2Q9NZ56 1722 aa16.83■□□□□ 0.28
APTX-227ENST00000485479 USP47Q96K76 1375 aa16.83■□□□□ 0.28
APTX-227ENST00000485479 C1orf167Q5SNV9 1468 aa16.82■□□□□ 0.28
APTX-227ENST00000485479 ADGRB2O60241 1585 aa16.82■□□□□ 0.28
APTX-227ENST00000485479 ST20-MTHFSA0A0A6YYL1 179 aa16.82■□□□□ 0.28
APTX-227ENST00000485479 EIF3AQ14152 1382 aaKnown RBP16.81■□□□□ 0.28
APTX-227ENST00000485479 USP32Q8NFA0 1604 aa16.81■□□□□ 0.28
APTX-227ENST00000485479 BRINP3Q76B58 766 aa16.8■□□□□ 0.28
APTX-227ENST00000485479 TULP4Q9NRJ4 1543 aa16.8■□□□□ 0.28
APTX-227ENST00000485479 WASLO00401 505 aaPredicted RBP16.8■□□□□ 0.28
APTX-227ENST00000485479 ESCO1Q5FWF5 840 aa16.8■□□□□ 0.28
APTX-227ENST00000485479 PRR36Q9H6K5 1346 aa16.8■□□□□ 0.28
APTX-227ENST00000485479 HSPA1LP34931 641 aa16.79■□□□□ 0.28
APTX-227ENST00000485479 CABP2Q9NPB3 220 aa16.79■□□□□ 0.28
APTX-227ENST00000485479 CDK19Q9BWU1 502 aa16.78■□□□□ 0.28
APTX-227ENST00000485479 XPCQ01831 940 aaPredicted RBP16.78■□□□□ 0.28
APTX-227ENST00000485479 SRPK2P78362 688 aaKnown RBP16.77■□□□□ 0.28
APTX-227ENST00000485479 PMFBP1Q8TBY8 1022 aa16.77■□□□□ 0.28
APTX-227ENST00000485479 ATP7BP35670 1465 aa16.75■□□□□ 0.27
APTX-227ENST00000485479 TESK2Q96S53 571 aa16.75■□□□□ 0.27
APTX-227ENST00000485479 FOXO3O43524 673 aa16.74■□□□□ 0.27
APTX-227ENST00000485479 PHLPP1O60346 1717 aa16.73■□□□□ 0.27
APTX-227ENST00000485479 HSPA5P11021 654 aaKnown RBP16.73■□□□□ 0.27
APTX-227ENST00000485479 NUDT16Q96DE0 195 aaKnown RBP16.73■□□□□ 0.27
APTX-227ENST00000485479 DISP3Q9P2K9 1392 aa16.73■□□□□ 0.27
APTX-227ENST00000485479 EVC2Q86UK5 1308 aa16.72■□□□□ 0.27
APTX-227ENST00000485479 PHF8Q9UPP1 1060 aa16.71■□□□□ 0.27
APTX-227ENST00000485479 NHSL1Q5SYE7 1610 aa16.71■□□□□ 0.26
APTX-227ENST00000485479 EIF4G2P78344 907 aaKnown RBP eCLIP16.7■□□□□ 0.26
APTX-227ENST00000485479 PLEKHG5O94827 1062 aa16.69■□□□□ 0.26
APTX-227ENST00000485479 ANKARQ7Z5J8 1434 aa16.69■□□□□ 0.26
APTX-227ENST00000485479 TOPAZ1Q8N9V7 1692 aa16.69■□□□□ 0.26
APTX-227ENST00000485479 COL16A1Q07092 1604 aaPredicted RBP16.69■□□□□ 0.26
APTX-227ENST00000485479 SBNO2Q9Y2G9 1366 aa16.69■□□□□ 0.26
APTX-227ENST00000485479 PPIP5K1Q6PFW1 1433 aa16.68■□□□□ 0.26
APTX-227ENST00000485479 POLR3GLQ9BT43 218 aa16.68■□□□□ 0.26
APTX-227ENST00000485479 AHDC1Q5TGY3 1603 aaPredicted RBP16.68■□□□□ 0.26
APTX-227ENST00000485479 ITSN1Q15811 1721 aa16.68■□□□□ 0.26
APTX-227ENST00000485479 CABP1Q9NZU7 370 aa16.68■□□□□ 0.26
APTX-227ENST00000485479 KIF1AQ12756 1690 aa16.66■□□□□ 0.26
APTX-227ENST00000485479 CCDC61Q9Y6R9 512 aa16.66■□□□□ 0.26
APTX-227ENST00000485479 NGDNQ8NEJ9 315 aaKnown RBP16.66■□□□□ 0.26
APTX-227ENST00000485479 TMC1Q8TDI8 760 aa16.65■□□□□ 0.26
APTX-227ENST00000485479 ACEP12821 1306 aa16.64■□□□□ 0.25
APTX-227ENST00000485479 NPHP3Q7Z494 1330 aa16.64■□□□□ 0.25
APTX-227ENST00000485479 PXDNQ92626 1479 aa16.64■□□□□ 0.25
APTX-227ENST00000485479 C11orf95C9JLR9 678 aaPredicted RBP16.64■□□□□ 0.25
APTX-227ENST00000485479 TMF1P82094 1093 aa16.63■□□□□ 0.25
APTX-227ENST00000485479 PSME1Q06323 249 aa16.63■□□□□ 0.25
APTX-227ENST00000485479 SLC12A5Q9H2X9 1139 aa16.63■□□□□ 0.25
APTX-227ENST00000485479 SOS2Q07890 1332 aaPredicted RBP16.62■□□□□ 0.25
APTX-227ENST00000485479 LMOD2Q6P5Q4 547 aa16.62■□□□□ 0.25
APTX-227ENST00000485479 KRT28Q7Z3Y7 464 aa16.62■□□□□ 0.25
APTX-227ENST00000485479 PAK3O75914 559 aaPredicted RBP16.61■□□□□ 0.25
APTX-227ENST00000485479 ATAD2Q6PL18 1390 aa16.61■□□□□ 0.25
APTX-227ENST00000485479 NUTM2GQ5VZR2 741 aa16.59■□□□□ 0.25
APTX-227ENST00000485479 TRPM3Q9HCF6 1732 aaPredicted RBP16.59■□□□□ 0.25
APTX-227ENST00000485479 PLEKHG3A1L390 1219 aa16.58■□□□□ 0.25
APTX-227ENST00000485479 POLR3AO14802 1390 aaPredicted RBP16.58■□□□□ 0.25
APTX-227ENST00000485479 MYOM1P52179 1685 aa16.58■□□□□ 0.24
APTX-227ENST00000485479 NUTM2BA6NNL0 878 aaPredicted RBP16.58■□□□□ 0.24
APTX-227ENST00000485479 NUTM2EB1AL46 878 aaPredicted RBP16.58■□□□□ 0.24
APTX-227ENST00000485479 NUTM2AQ8IVF1 878 aaPredicted RBP16.58■□□□□ 0.24
APTX-227ENST00000485479 CD163L1Q9NR16 1453 aa16.57■□□□□ 0.24
APTX-227ENST00000485479 LRRC59Q96AG4 307 aaKnown RBP16.57■□□□□ 0.24
APTX-227ENST00000485479 CABLES1Q8TDN4 633 aa16.57■□□□□ 0.24
APTX-227ENST00000485479 PNPLA6Q8IY17 1366 aa16.56■□□□□ 0.24
APTX-227ENST00000485479 JCADQ9P266 1359 aa16.56■□□□□ 0.24
APTX-227ENST00000485479 A0A1W2PP64 1363 aa16.56■□□□□ 0.24
APTX-227ENST00000485479 SPATA31A3Q5VYP0 1347 aa16.56■□□□□ 0.24
APTX-227ENST00000485479 AKAP12Q02952 1782 aa16.55■□□□□ 0.24
APTX-227ENST00000485479 TNS3Q68CZ2 1445 aa16.55■□□□□ 0.24
APTX-227ENST00000485479 USP6P35125 1406 aa16.55■□□□□ 0.24
APTX-227ENST00000485479 SHPRHQ149N8 1683 aa16.55■□□□□ 0.24
APTX-227ENST00000485479 LRP6O75581 1613 aa16.54■□□□□ 0.24
APTX-227ENST00000485479 ZEB1P37275 1124 aaPredicted RBP16.54■□□□□ 0.24
APTX-227ENST00000485479 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms