RNA–Protein interactions for RNA: ENST00000485449.1

CBX8-204, Transcript of chromobox 8, humanhuman

TSL 3

Gene CBX8, Length 581 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX8-204ENST00000485449 ARHGEF28Q8N1W1 1705 aaKnown RBP27.92■■■□□ 2.06
CBX8-204ENST00000485449 TRAK1Q9UPV9 953 aa27.91■■■□□ 2.06
CBX8-204ENST00000485449 ROBO1Q9Y6N7 1651 aa27.91■■■□□ 2.06
CBX8-204ENST00000485449 PRAM1Q96QH2 718 aa27.89■■■□□ 2.06
CBX8-204ENST00000485449 CDC42BPGQ6DT37 1551 aa27.89■■■□□ 2.05
CBX8-204ENST00000485449 NBPF8Q3BBV2 869 aa27.88■■■□□ 2.05
CBX8-204ENST00000485449 MST1RQ04912 1400 aa27.86■■■□□ 2.05
CBX8-204ENST00000485449 POGKQ9P215 609 aa27.86■■■□□ 2.05
CBX8-204ENST00000485449 TIMELESSQ9UNS1 1208 aa27.83■■■□□ 2.05
CBX8-204ENST00000485449 SAFB2Q14151 953 aaKnown RBP eCLIP27.82■■■□□ 2.04
CBX8-204ENST00000485449 ROCK2O75116 1388 aaKnown RBP27.81■■■□□ 2.04
CBX8-204ENST00000485449 FMN2Q9NZ56 1722 aa27.81■■■□□ 2.04
CBX8-204ENST00000485449 HSPA1LP34931 641 aa27.8■■■□□ 2.04
CBX8-204ENST00000485449 ADGRB2O60241 1585 aa27.8■■■□□ 2.04
CBX8-204ENST00000485449 RALGAPBQ86X10 1494 aa27.79■■■□□ 2.04
CBX8-204ENST00000485449 C1orf167Q5SNV9 1468 aa27.78■■■□□ 2.04
CBX8-204ENST00000485449 GPRASP1Q5JY77 1395 aa27.77■■■□□ 2.04
CBX8-204ENST00000485449 BRINP3Q76B58 766 aa27.75■■■□□ 2.03
CBX8-204ENST00000485449 MINK1Q8N4C8 1332 aaPredicted RBP27.74■■■□□ 2.03
CBX8-204ENST00000485449 PHLPP1O60346 1717 aa27.74■■■□□ 2.03
CBX8-204ENST00000485449 QRICH2Q9H0J4 1663 aa27.72■■■□□ 2.03
CBX8-204ENST00000485449 AHDC1Q5TGY3 1603 aaPredicted RBP27.71■■■□□ 2.03
CBX8-204ENST00000485449 RGPD8O14715 1765 aaPredicted RBP27.71■■■□□ 2.03
CBX8-204ENST00000485449 HIRIP3Q9BW71 556 aaPredicted RBP27.71■■■□□ 2.03
CBX8-204ENST00000485449 NHSL1Q5SYE7 1610 aa27.7■■■□□ 2.03
CBX8-204ENST00000485449 CENPJQ9HC77 1338 aaPredicted RBP27.69■■■□□ 2.02
CBX8-204ENST00000485449 NUTM2FA1L443 756 aa27.69■■■□□ 2.02
CBX8-204ENST00000485449 CARD11Q9BXL7 1154 aa27.69■■■□□ 2.02
CBX8-204ENST00000485449 ORAI2Q96SN7 254 aa27.68■■■□□ 2.02
CBX8-204ENST00000485449 COL16A1Q07092 1604 aaPredicted RBP27.67■■■□□ 2.02
CBX8-204ENST00000485449 USP32Q8NFA0 1604 aa27.67■■■□□ 2.02
CBX8-204ENST00000485449 EIF3AQ14152 1382 aaKnown RBP27.66■■■□□ 2.02
CBX8-204ENST00000485449 WASLO00401 505 aaPredicted RBP27.65■■■□□ 2.02
CBX8-204ENST00000485449 ESCO1Q5FWF5 840 aa27.65■■■□□ 2.02
CBX8-204ENST00000485449 ANKARQ7Z5J8 1434 aa27.64■■■□□ 2.02
CBX8-204ENST00000485449 TULP4Q9NRJ4 1543 aa27.63■■■□□ 2.01
CBX8-204ENST00000485449 KIF1AQ12756 1690 aa27.63■■■□□ 2.01
CBX8-204ENST00000485449 ITSN1Q15811 1721 aa27.58■■■□□ 2.01
CBX8-204ENST00000485449 DDX17Q92841 729 aaKnown RBP27.58■■■□□ 2.01
CBX8-204ENST00000485449 CDK19Q9BWU1 502 aa27.58■■■□□ 2.01
CBX8-204ENST00000485449 PRR36Q9H6K5 1346 aa27.57■■■□□ 2
CBX8-204ENST00000485449 ATP7BP35670 1465 aa27.55■■■□□ 2
CBX8-204ENST00000485449 NPHP3Q7Z494 1330 aa27.54■■■□□ 2
CBX8-204ENST00000485449 PHF8Q9UPP1 1060 aa27.54■■■□□ 2
CBX8-204ENST00000485449 TOPAZ1Q8N9V7 1692 aa27.53■■■□□ 2
CBX8-204ENST00000485449 SBNO2Q9Y2G9 1366 aa27.53■■■□□ 2
CBX8-204ENST00000485449 FOXO3O43524 673 aa27.53■■■□□ 2
CBX8-204ENST00000485449 SHPRHQ149N8 1683 aa27.52■■■□□ 2
CBX8-204ENST00000485449 JCADQ9P266 1359 aa27.52■■■□□ 2
CBX8-204ENST00000485449 SOS2Q07890 1332 aaPredicted RBP27.52■■■□□ 2
CBX8-204ENST00000485449 NUDT16Q96DE0 195 aaKnown RBP27.52■■■□□ 2
CBX8-204ENST00000485449 PXDNQ92626 1479 aa27.51■■■□□ 2
CBX8-204ENST00000485449 EVC2Q86UK5 1308 aa27.5■■□□□ 1.99
CBX8-204ENST00000485449 LRRC59Q96AG4 307 aaKnown RBP27.5■■□□□ 1.99
CBX8-204ENST00000485449 SRPK2P78362 688 aaKnown RBP27.49■■□□□ 1.99
CBX8-204ENST00000485449 PMFBP1Q8TBY8 1022 aa27.48■■□□□ 1.99
CBX8-204ENST00000485449 USP47Q96K76 1375 aa27.48■■□□□ 1.99
CBX8-204ENST00000485449 CABP2Q9NPB3 220 aa27.47■■□□□ 1.99
CBX8-204ENST00000485449 ST20-MTHFSA0A0A6YYL1 179 aa27.46■■□□□ 1.99
CBX8-204ENST00000485449 XPCQ01831 940 aaPredicted RBP27.45■■□□□ 1.98
CBX8-204ENST00000485449 CCDC61Q9Y6R9 512 aa27.45■■□□□ 1.98
CBX8-204ENST00000485449 MED1Q15648 1581 aaPredicted RBP27.44■■□□□ 1.98
CBX8-204ENST00000485449 KRT28Q7Z3Y7 464 aa27.43■■□□□ 1.98
CBX8-204ENST00000485449 PNPLA6Q8IY17 1366 aa27.41■■□□□ 1.98
CBX8-204ENST00000485449 PSME1Q06323 249 aa27.41■■□□□ 1.98
CBX8-204ENST00000485449 TESK2Q96S53 571 aa27.41■■□□□ 1.98
CBX8-204ENST00000485449 PPIP5K1Q6PFW1 1433 aa27.41■■□□□ 1.98
CBX8-204ENST00000485449 PLEKHG3A1L390 1219 aa27.4■■□□□ 1.98
CBX8-204ENST00000485449 NGDNQ8NEJ9 315 aaKnown RBP27.4■■□□□ 1.98
CBX8-204ENST00000485449 SPATA31A6Q5VVP1 1343 aa27.4■■□□□ 1.98
CBX8-204ENST00000485449 TRPM3Q9HCF6 1732 aaPredicted RBP27.39■■□□□ 1.98
CBX8-204ENST00000485449 COL22A1Q8NFW1 1626 aaPredicted RBP27.38■■□□□ 1.97
CBX8-204ENST00000485449 POLR3AO14802 1390 aaPredicted RBP27.38■■□□□ 1.97
CBX8-204ENST00000485449 SLC24A1O60721 1099 aa27.37■■□□□ 1.97
CBX8-204ENST00000485449 SBNO1A3KN83 1393 aa27.36■■□□□ 1.97
CBX8-204ENST00000485449 ACEP12821 1306 aa27.36■■□□□ 1.97
CBX8-204ENST00000485449 SPATA31A3Q5VYP0 1347 aa27.36■■□□□ 1.97
CBX8-204ENST00000485449 ATAD2Q6PL18 1390 aa27.35■■□□□ 1.97
CBX8-204ENST00000485449 TNS3Q68CZ2 1445 aa27.34■■□□□ 1.97
CBX8-204ENST00000485449 CABP1Q9NZU7 370 aa27.34■■□□□ 1.97
CBX8-204ENST00000485449 LRP6O75581 1613 aa27.33■■□□□ 1.97
CBX8-204ENST00000485449 ALS2Q96Q42 1657 aa27.33■■□□□ 1.97
CBX8-204ENST00000485449 PUS7Q96PZ0 661 aaKnown RBP27.32■■□□□ 1.96
CBX8-204ENST00000485449 EIF4G2P78344 907 aaKnown RBP eCLIP27.3■■□□□ 1.96
CBX8-204ENST00000485449 AKAP12Q02952 1782 aa27.3■■□□□ 1.96
CBX8-204ENST00000485449 NUTM2BA6NNL0 878 aaPredicted RBP27.29■■□□□ 1.96
CBX8-204ENST00000485449 NUTM2EB1AL46 878 aaPredicted RBP27.29■■□□□ 1.96
CBX8-204ENST00000485449 TMF1P82094 1093 aa27.29■■□□□ 1.96
CBX8-204ENST00000485449 NUTM2AQ8IVF1 878 aaPredicted RBP27.29■■□□□ 1.96
CBX8-204ENST00000485449 DISP3Q9P2K9 1392 aa27.29■■□□□ 1.96
CBX8-204ENST00000485449 ARHGEF10O15013 1369 aa27.28■■□□□ 1.96
CBX8-204ENST00000485449 PAK3O75914 559 aaPredicted RBP27.25■■□□□ 1.95
CBX8-204ENST00000485449 HSPA5P11021 654 aaKnown RBP27.25■■□□□ 1.95
CBX8-204ENST00000485449 LMOD2Q6P5Q4 547 aa27.25■■□□□ 1.95
CBX8-204ENST00000485449 ABCA3Q99758 1704 aa27.24■■□□□ 1.95
CBX8-204ENST00000485449 MARF1Q9Y4F3 1742 aaKnown RBP27.23■■□□□ 1.95
CBX8-204ENST00000485449 USP6P35125 1406 aa27.23■■□□□ 1.95
CBX8-204ENST00000485449 BRD4O60885 1362 aaPredicted RBP27.22■■□□□ 1.95
CBX8-204ENST00000485449 MEX3CQ5U5Q3 659 aaKnown RBP27.22■■□□□ 1.95
CBX8-204ENST00000485449 CPSF1Q10570 1443 aaKnown RBP27.22■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms