RNA–Protein interactions for RNA: ENST00000484893.1

GINS1-204, Transcript of GINS complex subunit 1, humanhuman

TSL 5

Gene GINS1, Length 583 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS1-204ENST00000484893 MSH6P52701 1360 aa18.53■□□□□ 0.56
GINS1-204ENST00000484893 CDC42BPGQ6DT37 1551 aa18.52■□□□□ 0.56
GINS1-204ENST00000484893 QRICH2Q9H0J4 1663 aa18.52■□□□□ 0.56
GINS1-204ENST00000484893 POGKQ9P215 609 aa18.51■□□□□ 0.55
GINS1-204ENST00000484893 CENPJQ9HC77 1338 aaPredicted RBP18.5■□□□□ 0.55
GINS1-204ENST00000484893 MST1RQ04912 1400 aa18.5■□□□□ 0.55
GINS1-204ENST00000484893 FMN2Q9NZ56 1722 aa18.5■□□□□ 0.55
GINS1-204ENST00000484893 C14orf37Q86TY3 774 aa18.49■□□□□ 0.55
GINS1-204ENST00000484893 MINK1Q8N4C8 1332 aaPredicted RBP18.49■□□□□ 0.55
GINS1-204ENST00000484893 HIRIP3Q9BW71 556 aaPredicted RBP18.48■□□□□ 0.55
GINS1-204ENST00000484893 USP32Q8NFA0 1604 aa18.48■□□□□ 0.55
GINS1-204ENST00000484893 UBAP1LF5GYI3 381 aa18.47■□□□□ 0.55
GINS1-204ENST00000484893 CADPS2Q86UW7 1296 aa18.47■□□□□ 0.55
GINS1-204ENST00000484893 TESK2Q96S53 571 aa18.47■□□□□ 0.55
GINS1-204ENST00000484893 RGPD8O14715 1765 aaPredicted RBP18.47■□□□□ 0.55
GINS1-204ENST00000484893 USP47Q96K76 1375 aa18.46■□□□□ 0.55
GINS1-204ENST00000484893 SBNO2Q9Y2G9 1366 aa18.46■□□□□ 0.55
GINS1-204ENST00000484893 TULP4Q9NRJ4 1543 aa18.46■□□□□ 0.55
GINS1-204ENST00000484893 SLAIN2Q9P270 581 aa18.46■□□□□ 0.55
GINS1-204ENST00000484893 ST20-MTHFSA0A0A6YYL1 179 aa18.45■□□□□ 0.54
GINS1-204ENST00000484893 TOM1O60784 492 aa18.45■□□□□ 0.54
GINS1-204ENST00000484893 ATF3P18847 181 aa18.45■□□□□ 0.54
GINS1-204ENST00000484893 C1orf167Q5SNV9 1468 aa18.45■□□□□ 0.54
GINS1-204ENST00000484893 EIF3AQ14152 1382 aaKnown RBP18.44■□□□□ 0.54
GINS1-204ENST00000484893 WASLO00401 505 aaPredicted RBP18.44■□□□□ 0.54
GINS1-204ENST00000484893 PRR36Q9H6K5 1346 aa18.44■□□□□ 0.54
GINS1-204ENST00000484893 FBXO41Q8TF61 875 aa18.43■□□□□ 0.54
GINS1-204ENST00000484893 ROBO1Q9Y6N7 1651 aa18.42■□□□□ 0.54
GINS1-204ENST00000484893 CDK19Q9BWU1 502 aa18.41■□□□□ 0.54
GINS1-204ENST00000484893 BRINP3Q76B58 766 aa18.4■□□□□ 0.54
GINS1-204ENST00000484893 ORAI2Q96SN7 254 aa18.4■□□□□ 0.54
GINS1-204ENST00000484893 ATP7BP35670 1465 aa18.39■□□□□ 0.54
GINS1-204ENST00000484893 NUTM2FA1L443 756 aa18.39■□□□□ 0.53
GINS1-204ENST00000484893 PIP4K2BP78356 416 aa18.39■□□□□ 0.53
GINS1-204ENST00000484893 ANKARQ7Z5J8 1434 aa18.39■□□□□ 0.53
GINS1-204ENST00000484893 HSPA5P11021 654 aaKnown RBP18.38■□□□□ 0.53
GINS1-204ENST00000484893 TOPAZ1Q8N9V7 1692 aa18.38■□□□□ 0.53
GINS1-204ENST00000484893 DISP3Q9P2K9 1392 aa18.36■□□□□ 0.53
GINS1-204ENST00000484893 NHSL1Q5SYE7 1610 aa18.35■□□□□ 0.53
GINS1-204ENST00000484893 EIF4G2P78344 907 aaKnown RBP eCLIP18.35■□□□□ 0.53
GINS1-204ENST00000484893 ILDR1Q86SU0 546 aaPredicted RBP18.35■□□□□ 0.53
GINS1-204ENST00000484893 NUDT16Q96DE0 195 aaKnown RBP18.35■□□□□ 0.53
GINS1-204ENST00000484893 CABP2Q9NPB3 220 aa18.35■□□□□ 0.53
GINS1-204ENST00000484893 EVC2Q86UK5 1308 aa18.34■□□□□ 0.53
GINS1-204ENST00000484893 AHDC1Q5TGY3 1603 aaPredicted RBP18.33■□□□□ 0.52
GINS1-204ENST00000484893 ITSN1Q15811 1721 aa18.32■□□□□ 0.52
GINS1-204ENST00000484893 C11orf95C9JLR9 678 aaPredicted RBP18.32■□□□□ 0.52
GINS1-204ENST00000484893 ESCO1Q5FWF5 840 aa18.32■□□□□ 0.52
GINS1-204ENST00000484893 DDX17Q92841 729 aaKnown RBP18.32■□□□□ 0.52
GINS1-204ENST00000484893 ZEB1P37275 1124 aaPredicted RBP18.31■□□□□ 0.52
GINS1-204ENST00000484893 PUS7Q96PZ0 661 aaKnown RBP18.31■□□□□ 0.52
GINS1-204ENST00000484893 KIF1AQ12756 1690 aa18.31■□□□□ 0.52
GINS1-204ENST00000484893 PLEKHG3A1L390 1219 aa18.3■□□□□ 0.52
GINS1-204ENST00000484893 SRPK2P78362 688 aaKnown RBP18.3■□□□□ 0.52
GINS1-204ENST00000484893 PHF8Q9UPP1 1060 aa18.3■□□□□ 0.52
GINS1-204ENST00000484893 CCDC61Q9Y6R9 512 aa18.3■□□□□ 0.52
GINS1-204ENST00000484893 COL16A1Q07092 1604 aaPredicted RBP18.3■□□□□ 0.52
GINS1-204ENST00000484893 SCAF1Q9H7N4 1312 aaKnown RBP18.29■□□□□ 0.52
GINS1-204ENST00000484893 PXDNQ92626 1479 aa18.29■□□□□ 0.52
GINS1-204ENST00000484893 HSPA1LP34931 641 aa18.29■□□□□ 0.52
GINS1-204ENST00000484893 PHLPP1O60346 1717 aa18.29■□□□□ 0.52
GINS1-204ENST00000484893 POLR3AO14802 1390 aaPredicted RBP18.28■□□□□ 0.52
GINS1-204ENST00000484893 SOS2Q07890 1332 aaPredicted RBP18.27■□□□□ 0.52
GINS1-204ENST00000484893 PPIP5K1Q6PFW1 1433 aa18.27■□□□□ 0.52
GINS1-204ENST00000484893 FOXO3O43524 673 aa18.27■□□□□ 0.52
GINS1-204ENST00000484893 PMFBP1Q8TBY8 1022 aa18.27■□□□□ 0.52
GINS1-204ENST00000484893 CD163L1Q9NR16 1453 aa18.26■□□□□ 0.51
GINS1-204ENST00000484893 SLC24A1O60721 1099 aa18.26■□□□□ 0.51
GINS1-204ENST00000484893 TMF1P82094 1093 aa18.26■□□□□ 0.51
GINS1-204ENST00000484893 CABP1Q9NZU7 370 aa18.26■□□□□ 0.51
GINS1-204ENST00000484893 TRPM3Q9HCF6 1732 aaPredicted RBP18.26■□□□□ 0.51
GINS1-204ENST00000484893 ATAD2Q6PL18 1390 aa18.25■□□□□ 0.51
GINS1-204ENST00000484893 MYOM1P52179 1685 aa18.25■□□□□ 0.51
GINS1-204ENST00000484893 AKAP12Q02952 1782 aa18.24■□□□□ 0.51
GINS1-204ENST00000484893 ACEP12821 1306 aa18.23■□□□□ 0.51
GINS1-204ENST00000484893 CPSF1Q10570 1443 aaKnown RBP18.23■□□□□ 0.51
GINS1-204ENST00000484893 XPCQ01831 940 aaPredicted RBP18.22■□□□□ 0.51
GINS1-204ENST00000484893 SLC12A5Q9H2X9 1139 aa18.22■□□□□ 0.51
GINS1-204ENST00000484893 NPHP3Q7Z494 1330 aa18.22■□□□□ 0.51
GINS1-204ENST00000484893 SSH2Q76I76 1423 aa18.21■□□□□ 0.51
GINS1-204ENST00000484893 KRT28Q7Z3Y7 464 aa18.2■□□□□ 0.5
GINS1-204ENST00000484893 ALS2Q96Q42 1657 aa18.19■□□□□ 0.5
GINS1-204ENST00000484893 MON2Q7Z3U7 1717 aa18.19■□□□□ 0.5
GINS1-204ENST00000484893 KIF7Q2M1P5 1343 aa18.19■□□□□ 0.5
GINS1-204ENST00000484893 NGDNQ8NEJ9 315 aaKnown RBP18.18■□□□□ 0.5
GINS1-204ENST00000484893 SBNO1A3KN83 1393 aa18.17■□□□□ 0.5
GINS1-204ENST00000484893 NRKQ7Z2Y5 1582 aa18.17■□□□□ 0.5
GINS1-204ENST00000484893 USP6P35125 1406 aa18.17■□□□□ 0.5
GINS1-204ENST00000484893 PSME1Q06323 249 aa18.17■□□□□ 0.5
GINS1-204ENST00000484893 SPATA31A3Q5VYP0 1347 aa18.17■□□□□ 0.5
GINS1-204ENST00000484893 SHPRHQ149N8 1683 aa18.16■□□□□ 0.5
GINS1-204ENST00000484893 CDCA8Q53HL2 280 aa18.16■□□□□ 0.5
GINS1-204ENST00000484893 WASHC2AQ641Q2 1341 aa18.16■□□□□ 0.5
GINS1-204ENST00000484893 A0A1W2PP64 1363 aa18.16■□□□□ 0.5
GINS1-204ENST00000484893 PNPLA6Q8IY17 1366 aa18.16■□□□□ 0.5
GINS1-204ENST00000484893 NINLQ9Y2I6 1382 aa18.16■□□□□ 0.5
GINS1-204ENST00000484893 LRRC59Q96AG4 307 aaKnown RBP18.15■□□□□ 0.5
GINS1-204ENST00000484893 COL22A1Q8NFW1 1626 aaPredicted RBP18.14■□□□□ 0.49
GINS1-204ENST00000484893 TMC1Q8TDI8 760 aa18.14■□□□□ 0.49
GINS1-204ENST00000484893 CCDC7Q96M83 1385 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms