RNA–Protein interactions for RNA: ENST00000484751.1

TMEM248-206, Transcript of transmembrane protein 248, humanhuman

TSL 2

Gene TMEM248, Length 739 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-206ENST00000484751 PPLO60437 1756 aa11.23□□□□□ -0.61
TMEM248-206ENST00000484751 ADGRB1O14514 1584 aa11.22□□□□□ -0.61
TMEM248-206ENST00000484751 RTL5Q5HYW3 569 aaPredicted RBP11.22□□□□□ -0.61
TMEM248-206ENST00000484751 CAMSAP1Q5T5Y3 1602 aa11.22□□□□□ -0.61
TMEM248-206ENST00000484751 BACH2Q9BYV9 841 aa11.22□□□□□ -0.61
TMEM248-206ENST00000484751 ANKRD36BQ8N2N9 1353 aa11.2□□□□□ -0.62
TMEM248-206ENST00000484751 APAF1O14727 1248 aa11.2□□□□□ -0.62
TMEM248-206ENST00000484751 PDE3AQ14432 1141 aa11.2□□□□□ -0.62
TMEM248-206ENST00000484751 RUNDC1Q96C34 613 aa11.2□□□□□ -0.62
TMEM248-206ENST00000484751 CARD14Q9BXL6 1004 aa11.2□□□□□ -0.62
TMEM248-206ENST00000484751 TRAK1Q9UPV9 953 aa11.2□□□□□ -0.62
TMEM248-206ENST00000484751 QRICH2Q9H0J4 1663 aa11.2□□□□□ -0.62
TMEM248-206ENST00000484751 PIK3C2BO00750 1634 aa11.2□□□□□ -0.62
TMEM248-206ENST00000484751 PLIN1O60240 522 aa11.19□□□□□ -0.62
TMEM248-206ENST00000484751 WDR63Q8IWG1 891 aa11.19□□□□□ -0.62
TMEM248-206ENST00000484751 DIP2CQ9Y2E4 1556 aa11.19□□□□□ -0.62
TMEM248-206ENST00000484751 ATAD2Q6PL18 1390 aa11.18□□□□□ -0.62
TMEM248-206ENST00000484751 KDM2BQ8NHM5 1336 aa11.18□□□□□ -0.62
TMEM248-206ENST00000484751 CANXP27824 592 aaKnown RBP11.18□□□□□ -0.62
TMEM248-206ENST00000484751 CCDC27Q2M243 656 aa11.18□□□□□ -0.62
TMEM248-206ENST00000484751 CCDC146Q8IYE0 955 aa11.18□□□□□ -0.62
TMEM248-206ENST00000484751 GLI2P10070 1586 aa11.18□□□□□ -0.62
TMEM248-206ENST00000484751 PPM1GO15355 546 aaPredicted RBP11.17□□□□□ -0.62
TMEM248-206ENST00000484751 CT47B1P0C2W7 299 aaPredicted RBP11.17□□□□□ -0.62
TMEM248-206ENST00000484751 POTEHQ6S545 545 aa11.17□□□□□ -0.62
TMEM248-206ENST00000484751 PNNQ9H307 717 aaKnown RBP11.17□□□□□ -0.62
TMEM248-206ENST00000484751 MYH16Q9H6N6 1097 aa11.17□□□□□ -0.62
TMEM248-206ENST00000484751 DAXXQ9UER7 740 aaPredicted RBP11.17□□□□□ -0.62
TMEM248-206ENST00000484751 NEXMIFQ5QGS0 1516 aa11.17□□□□□ -0.62
TMEM248-206ENST00000484751 TERF2IPQ9NYB0 399 aa11.16□□□□□ -0.62
TMEM248-206ENST00000484751 USP35Q9P2H5 1018 aa11.16□□□□□ -0.62
TMEM248-206ENST00000484751 FAM161AQ3B820 660 aa11.15□□□□□ -0.62
TMEM248-206ENST00000484751 WWC1Q8IX03 1113 aa11.15□□□□□ -0.62
TMEM248-206ENST00000484751 MAPK8IP3Q9UPT6 1336 aa11.14□□□□□ -0.63
TMEM248-206ENST00000484751 NPM2Q86SE8 214 aaKnown RBP11.14□□□□□ -0.63
TMEM248-206ENST00000484751 SLC12A5Q9H2X9 1139 aa11.14□□□□□ -0.63
TMEM248-206ENST00000484751 MED14O60244 1454 aa11.13□□□□□ -0.63
TMEM248-206ENST00000484751 PMFBP1Q8TBY8 1022 aa11.13□□□□□ -0.63
TMEM248-206ENST00000484751 ZMYM3Q14202 1370 aa11.13□□□□□ -0.63
TMEM248-206ENST00000484751 IQSEC2Q5JU85 1478 aa11.12□□□□□ -0.63
TMEM248-206ENST00000484751 C20orf194Q5TEA3 1177 aa11.12□□□□□ -0.63
TMEM248-206ENST00000484751 TMEM132EQ6IEE7 984 aa11.12□□□□□ -0.63
TMEM248-206ENST00000484751 HDGFL2Q7Z4V5 671 aaPredicted RBP11.12□□□□□ -0.63
TMEM248-206ENST00000484751 TULP4Q9NRJ4 1543 aa11.12□□□□□ -0.63
TMEM248-206ENST00000484751 ABCC11Q96J66 1382 aa11.12□□□□□ -0.63
TMEM248-206ENST00000484751 RICTORQ6R327 1708 aa11.12□□□□□ -0.63
TMEM248-206ENST00000484751 ARHGEF28Q8N1W1 1705 aaKnown RBP11.12□□□□□ -0.63
TMEM248-206ENST00000484751 RAPGEF3O95398 923 aa11.11□□□□□ -0.63
TMEM248-206ENST00000484751 MTHFSP49914 203 aa11.11□□□□□ -0.63
TMEM248-206ENST00000484751 TCP11L2Q8N4U5 519 aa11.11□□□□□ -0.63
TMEM248-206ENST00000484751 RNF39Q9H2S5 420 aa11.11□□□□□ -0.63
TMEM248-206ENST00000484751 REREQ9P2R6 1566 aa11.11□□□□□ -0.63
TMEM248-206ENST00000484751 PAK3O75914 559 aaPredicted RBP11.1□□□□□ -0.63
TMEM248-206ENST00000484751 SRPK2P78362 688 aaKnown RBP11.1□□□□□ -0.63
TMEM248-206ENST00000484751 IDI1Q13907 227 aa11.1□□□□□ -0.63
TMEM248-206ENST00000484751 CLUAP1Q96AJ1 413 aa11.1□□□□□ -0.63
TMEM248-206ENST00000484751 POGKQ9P215 609 aa11.1□□□□□ -0.63
TMEM248-206ENST00000484751 AGLP35573 1532 aa11.09□□□□□ -0.63
TMEM248-206ENST00000484751 SHPRHQ149N8 1683 aa11.09□□□□□ -0.63
TMEM248-206ENST00000484751 NEFMP07197 916 aa11.09□□□□□ -0.63
TMEM248-206ENST00000484751 STAG3Q9UJ98 1225 aa11.09□□□□□ -0.63
TMEM248-206ENST00000484751 YTHDC2Q9H6S0 1430 aaKnown RBP11.09□□□□□ -0.63
TMEM248-206ENST00000484751 IL16Q14005 1332 aa11.09□□□□□ -0.63
TMEM248-206ENST00000484751 U2AF1L5P0DN76 240 aaPredicted RBP11.08□□□□□ -0.64
TMEM248-206ENST00000484751 U2AF1Q01081 240 aaKnown RBP eCLIP11.08□□□□□ -0.646e-7■□□□□ 8.1
TMEM248-206ENST00000484751 PREX1Q8TCU6 1659 aa11.08□□□□□ -0.64
TMEM248-206ENST00000484751 SIGLEC1Q9BZZ2 1709 aa11.07□□□□□ -0.64
TMEM248-206ENST00000484751 TMEM131LA2VDJ0 1609 aa11.07□□□□□ -0.64
TMEM248-206ENST00000484751 BCAR3O75815 825 aa11.07□□□□□ -0.64
TMEM248-206ENST00000484751 DEKP35659 375 aaKnown RBP11.07□□□□□ -0.64
TMEM248-206ENST00000484751 TNNT2P45379 298 aaPredicted RBP11.07□□□□□ -0.64
TMEM248-206ENST00000484751 RARSP54136 660 aaKnown RBP11.07□□□□□ -0.64
TMEM248-206ENST00000484751 NBR1Q14596 966 aa11.07□□□□□ -0.64
TMEM248-206ENST00000484751 SPINK5Q9NQ38 1064 aaPredicted RBP11.07□□□□□ -0.64
TMEM248-206ENST00000484751 DLC1Q96QB1 1528 aa11.07□□□□□ -0.64
TMEM248-206ENST00000484751 CLTCQ00610 1675 aaKnown RBP11.07□□□□□ -0.64
TMEM248-206ENST00000484751 A0A1W2PP64 1363 aa11.06□□□□□ -0.64
TMEM248-206ENST00000484751 HDGFP51858 240 aaKnown RBP11.06□□□□□ -0.64
TMEM248-206ENST00000484751 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.06□□□□□ -0.64
TMEM248-206ENST00000484751 RWDD1Q9H446 243 aaPredicted RBP11.06□□□□□ -0.64
TMEM248-206ENST00000484751 UPF2Q9HAU5 1272 aaKnown RBP11.06□□□□□ -0.64
TMEM248-206ENST00000484751 CABP2Q9NPB3 220 aa11.06□□□□□ -0.64
TMEM248-206ENST00000484751 YEATS2Q9ULM3 1422 aa11.06□□□□□ -0.64
TMEM248-206ENST00000484751 ADGRB2O60241 1585 aa11.06□□□□□ -0.64
TMEM248-206ENST00000484751 PTPRMP28827 1452 aa11.06□□□□□ -0.64
TMEM248-206ENST00000484751 CALD1Q05682 793 aaKnown RBP11.05□□□□□ -0.64
TMEM248-206ENST00000484751 CHMP4BQ9H444 224 aaKnown RBP11.05□□□□□ -0.64
TMEM248-206ENST00000484751 NEUROD2Q15784 382 aa11.04□□□□□ -0.64
TMEM248-206ENST00000484751 ZKSCAN2Q63HK3 967 aa11.04□□□□□ -0.64
TMEM248-206ENST00000484751 FTSJ3Q8IY81 847 aaKnown RBP11.04□□□□□ -0.64
TMEM248-206ENST00000484751 FRAT1Q92837 279 aaPredicted RBP11.04□□□□□ -0.64
TMEM248-206ENST00000484751 ZNF428Q96B54 188 aa11.04□□□□□ -0.64
TMEM248-206ENST00000484751 PRAM1Q96QH2 718 aa11.04□□□□□ -0.64
TMEM248-206ENST00000484751 STK26Q9P289 416 aa11.04□□□□□ -0.64
TMEM248-206ENST00000484751 ATP7BP35670 1465 aa11.04□□□□□ -0.64
TMEM248-206ENST00000484751 IPO8O15397 1037 aaKnown RBP11.03□□□□□ -0.64
TMEM248-206ENST00000484751 DIAPH1O60610 1272 aaKnown RBP11.03□□□□□ -0.64
TMEM248-206ENST00000484751 RGS3P49796 1198 aa11.03□□□□□ -0.64
TMEM248-206ENST00000484751 BECN1Q14457 450 aa11.03□□□□□ -0.64
TMEM248-206ENST00000484751 C8orf34Q49A92 452 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms