RNA–Protein interactions for RNA: ENST00000484566.5

DDX39B-221, Transcript of DExD-box helicase 39B, humanhuman

TSL 5

Gene DDX39B, Length 857 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-221ENST00000484566 SENP3-EIF4A1A0A087X0R7 540 aa13.37□□□□□ -0.27
DDX39B-221ENST00000484566 KANK4Q5T7N3 995 aaPredicted RBP13.37□□□□□ -0.27
DDX39B-221ENST00000484566 NGLY1Q96IV0 654 aa13.37□□□□□ -0.27
DDX39B-221ENST00000484566 NHSL1Q5SYE7 1610 aa13.36□□□□□ -0.27
DDX39B-221ENST00000484566 AHDC1Q5TGY3 1603 aaPredicted RBP13.36□□□□□ -0.27
DDX39B-221ENST00000484566 PAK3O75914 559 aaPredicted RBP13.36□□□□□ -0.27
DDX39B-221ENST00000484566 NCOA3Q9Y6Q9 1424 aa13.36□□□□□ -0.27
DDX39B-221ENST00000484566 GCC2Q8IWJ2 1684 aa13.35□□□□□ -0.27
DDX39B-221ENST00000484566 MYO5BQ9ULV0 1848 aa13.35□□□□□ -0.27
DDX39B-221ENST00000484566 HDGFP51858 240 aaKnown RBP13.35□□□□□ -0.27
DDX39B-221ENST00000484566 RPRD2Q5VT52 1461 aaKnown RBP13.35□□□□□ -0.27
DDX39B-221ENST00000484566 ZFYVE9O95405 1425 aa13.34□□□□□ -0.27
DDX39B-221ENST00000484566 RIMS2Q9UQ26 1411 aa13.34□□□□□ -0.27
DDX39B-221ENST00000484566 IFNLR1Q8IU57 520 aaPredicted RBP13.34□□□□□ -0.27
DDX39B-221ENST00000484566 CADPS2Q86UW7 1296 aa13.33□□□□□ -0.28
DDX39B-221ENST00000484566 ATF3P18847 181 aa13.32□□□□□ -0.28
DDX39B-221ENST00000484566 HRCP23327 699 aa13.32□□□□□ -0.28
DDX39B-221ENST00000484566 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.32□□□□□ -0.28
DDX39B-221ENST00000484566 DIP2AQ14689 1571 aa13.32□□□□□ -0.28
DDX39B-221ENST00000484566 SPOCK2Q92563 424 aa13.31□□□□□ -0.28
DDX39B-221ENST00000484566 CHIC2Q9UKJ5 165 aa13.31□□□□□ -0.28
DDX39B-221ENST00000484566 CEP350Q5VT06 3117 aa13.3□□□□□ -0.28
DDX39B-221ENST00000484566 C19orf67A6NJJ6 358 aa13.3□□□□□ -0.28
DDX39B-221ENST00000484566 CD44P16070 742 aaKnown RBP13.3□□□□□ -0.28
DDX39B-221ENST00000484566 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.3□□□□□ -0.28
DDX39B-221ENST00000484566 C19orf44Q9H6X5 657 aa13.3□□□□□ -0.28
DDX39B-221ENST00000484566 TBX22Q9Y458 520 aa13.3□□□□□ -0.28
DDX39B-221ENST00000484566 TMEM131LA2VDJ0 1609 aa13.3□□□□□ -0.28
DDX39B-221ENST00000484566 C8orf37Q96NL8 207 aa13.29□□□□□ -0.28
DDX39B-221ENST00000484566 PIK3R4Q99570 1358 aa13.29□□□□□ -0.28
DDX39B-221ENST00000484566 CHGAP10645 457 aaKnown RBP13.27□□□□□ -0.29
DDX39B-221ENST00000484566 ADAMTS13Q76LX8 1427 aa13.27□□□□□ -0.29
DDX39B-221ENST00000484566 ADGRL2O95490 1459 aa13.27□□□□□ -0.29
DDX39B-221ENST00000484566 TRPM2O94759 1503 aa13.27□□□□□ -0.29
DDX39B-221ENST00000484566 DCCP43146 1447 aa13.26□□□□□ -0.29
DDX39B-221ENST00000484566 BRINP3Q76B58 766 aa13.26□□□□□ -0.29
DDX39B-221ENST00000484566 DEFB132Q7Z7B7 95 aa13.26□□□□□ -0.29
DDX39B-221ENST00000484566 ASXL1Q8IXJ9 1541 aa13.25□□□□□ -0.29
DDX39B-221ENST00000484566 BCL9LQ86UU0 1499 aa13.25□□□□□ -0.29
DDX39B-221ENST00000484566 ANKRD50Q9ULJ7 1429 aa13.25□□□□□ -0.29
DDX39B-221ENST00000484566 PSDA5PKW4 1024 aaPredicted RBP13.25□□□□□ -0.29
DDX39B-221ENST00000484566 BLMP54132 1417 aaPredicted RBP13.24□□□□□ -0.29
DDX39B-221ENST00000484566 SETD5Q9C0A6 1442 aa13.23□□□□□ -0.29
DDX39B-221ENST00000484566 NUBP1P53384 320 aa13.23□□□□□ -0.29
DDX39B-221ENST00000484566 C1QTNF8P60827 252 aa13.23□□□□□ -0.29
DDX39B-221ENST00000484566 FAM212AQ96EL1 285 aa13.23□□□□□ -0.29
DDX39B-221ENST00000484566 DCAF8Q5TAQ9 597 aa13.22□□□□□ -0.29
DDX39B-221ENST00000484566 TSPYL2Q9H2G4 693 aaPredicted RBP13.22□□□□□ -0.29
DDX39B-221ENST00000484566 UNC13BO14795 1591 aa13.22□□□□□ -0.29
DDX39B-221ENST00000484566 TRPC5Q9UL62 973 aaPredicted RBP13.21□□□□□ -0.29
DDX39B-221ENST00000484566 AMOTL2Q9Y2J4 779 aa13.21□□□□□ -0.29
DDX39B-221ENST00000484566 E9PCH4 1651 aa13.21□□□□□ -0.3
DDX39B-221ENST00000484566 XRN1Q8IZH2 1706 aaKnown RBP13.2□□□□□ -0.3
DDX39B-221ENST00000484566 LRRC59Q96AG4 307 aaKnown RBP13.2□□□□□ -0.3
DDX39B-221ENST00000484566 MST1RQ04912 1400 aa13.2□□□□□ -0.3
DDX39B-221ENST00000484566 GSE1Q14687 1217 aa13.19□□□□□ -0.3
DDX39B-221ENST00000484566 ZNF784Q8NCA9 323 aaPredicted RBP13.19□□□□□ -0.3
DDX39B-221ENST00000484566 PTPRUQ92729 1446 aa13.19□□□□□ -0.3
DDX39B-221ENST00000484566 FAM50AQ14320 339 aaKnown RBP13.18□□□□□ -0.3
DDX39B-221ENST00000484566 RASEFQ8IZ41 740 aa13.18□□□□□ -0.3
DDX39B-221ENST00000484566 USP21Q9UK80 565 aa13.18□□□□□ -0.3
DDX39B-221ENST00000484566 PNPLA6Q8IY17 1366 aa13.18□□□□□ -0.3
DDX39B-221ENST00000484566 IQGAP3Q86VI3 1631 aa13.17□□□□□ -0.3
DDX39B-221ENST00000484566 LOC105371045A0A1W2PR82 267 aa13.16□□□□□ -0.3
DDX39B-221ENST00000484566 NRXN3Q9Y4C0 1643 aa13.16□□□□□ -0.3
DDX39B-221ENST00000484566 ADGRL3Q9HAR2 1447 aa13.15□□□□□ -0.3
DDX39B-221ENST00000484566 SF3B2Q13435 895 aaKnown RBP13.15□□□□□ -0.3
DDX39B-221ENST00000484566 ATRNO75882 1429 aa13.14□□□□□ -0.31
DDX39B-221ENST00000484566 FNBP4Q8N3X1 1017 aaPredicted RBP13.14□□□□□ -0.31
DDX39B-221ENST00000484566 CIZ1Q9ULV3 898 aaPredicted RBP13.14□□□□□ -0.31
DDX39B-221ENST00000484566 NALCNQ8IZF0 1738 aa13.13□□□□□ -0.31
DDX39B-221ENST00000484566 ADAMTS2O95450 1211 aa13.13□□□□□ -0.31
DDX39B-221ENST00000484566 CLCN6P51797 869 aa13.13□□□□□ -0.31
DDX39B-221ENST00000484566 EVX2Q03828 476 aa13.13□□□□□ -0.31
DDX39B-221ENST00000484566 BRWD3Q6RI45 1802 aa13.13□□□□□ -0.31
DDX39B-221ENST00000484566 DDX17Q92841 729 aaKnown RBP13.12□□□□□ -0.31
DDX39B-221ENST00000484566 ZNF326Q5BKZ1 582 aaKnown RBP13.11□□□□□ -0.31
DDX39B-221ENST00000484566 UTRNP46939 3433 aa13.11□□□□□ -0.31
DDX39B-221ENST00000484566 SPHKAPQ2M3C7 1700 aa13.1□□□□□ -0.31
DDX39B-221ENST00000484566 METP08581 1390 aa13.1□□□□□ -0.31
DDX39B-221ENST00000484566 ZNF579Q8NAF0 562 aaKnown RBP13.1□□□□□ -0.31
DDX39B-221ENST00000484566 PTCH1Q13635 1447 aa13.1□□□□□ -0.31
DDX39B-221ENST00000484566 C1orf167Q5SNV9 1468 aa13.1□□□□□ -0.31
DDX39B-221ENST00000484566 LAMC1P11047 1609 aa13.1□□□□□ -0.31
DDX39B-221ENST00000484566 NUP155O75694 1391 aa13.09□□□□□ -0.31
DDX39B-221ENST00000484566 R3HDM1Q15032 1099 aaKnown RBP13.09□□□□□ -0.31
DDX39B-221ENST00000484566 SP7Q8TDD2 431 aaPredicted RBP13.09□□□□□ -0.31
DDX39B-221ENST00000484566 ROCK1Q13464 1354 aa13.08□□□□□ -0.31
DDX39B-221ENST00000484566 CHD4Q14839 1912 aa13.07□□□□□ -0.32
DDX39B-221ENST00000484566 GJD4Q96KN9 370 aaPredicted RBP13.06□□□□□ -0.32
DDX39B-221ENST00000484566 CCDC61Q9Y6R9 512 aa13.06□□□□□ -0.32
DDX39B-221ENST00000484566 SOS2Q07890 1332 aaPredicted RBP13.06□□□□□ -0.32
DDX39B-221ENST00000484566 COL22A1Q8NFW1 1626 aaPredicted RBP13.06□□□□□ -0.32
DDX39B-221ENST00000484566 NEXMIFQ5QGS0 1516 aa13.05□□□□□ -0.32
DDX39B-221ENST00000484566 SLC34A2O95436 690 aa13.05□□□□□ -0.32
DDX39B-221ENST00000484566 BAG6P46379 1132 aa13.04□□□□□ -0.32
DDX39B-221ENST00000484566 CAMTA1Q9Y6Y1 1673 aa13.03□□□□□ -0.32
DDX39B-221ENST00000484566 MARF1Q9Y4F3 1742 aaKnown RBP13.02□□□□□ -0.32
DDX39B-221ENST00000484566 KIF1BO60333 1816 aa13.02□□□□□ -0.32
DDX39B-221ENST00000484566 PHF12Q96QT6 1004 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms