RNA–Protein interactions for RNA: ENST00000483813.5

NECAB3-209, Transcript of N-terminal EF-hand calcium binding protein 3, human

TSL 5

Gene NECAB3, Length 1,277 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NECAB3-209	ENST00000483813	KNDC1	Q76NI1	1749 aa		28.97	■■■□□ 2.23
NECAB3-209	ENST00000483813	NALCN	Q8IZF0	1738 aa		28.96	■■■□□ 2.23
NECAB3-209	ENST00000483813	KIAA1210	Q9ULL0	1709 aa		28.93	■■■□□ 2.22
NECAB3-209	ENST00000483813	DLC1	Q96QB1	1528 aa		28.92	■■■□□ 2.22
NECAB3-209	ENST00000483813	ROCK2	O75116	1388 aa	Known RBP	28.91	■■■□□ 2.22
NECAB3-209	ENST00000483813	NBPF8	Q3BBV2	869 aa		28.91	■■■□□ 2.22
NECAB3-209	ENST00000483813	ROBO1	Q9Y6N7	1651 aa		28.9	■■■□□ 2.22
NECAB3-209	ENST00000483813	NUTM2F	A1L443	756 aa		28.9	■■■□□ 2.22
NECAB3-209	ENST00000483813	MST1R	Q04912	1400 aa		28.89	■■■□□ 2.22
NECAB3-209	ENST00000483813	MINK1	Q8N4C8	1332 aa	Predicted RBP	28.89	■■■□□ 2.21
NECAB3-209	ENST00000483813	HIRIP3	Q9BW71	556 aa	Predicted RBP	28.88	■■■□□ 2.21
NECAB3-209	ENST00000483813	BRINP3	Q76B58	766 aa		28.87	■■■□□ 2.21
NECAB3-209	ENST00000483813	TIMELESS	Q9UNS1	1208 aa		28.84	■■■□□ 2.21
NECAB3-209	ENST00000483813	C1orf167	Q5SNV9	1468 aa		28.84	■■■□□ 2.21
NECAB3-209	ENST00000483813	CDC42BPG	Q6DT37	1551 aa		28.84	■■■□□ 2.21
NECAB3-209	ENST00000483813	TRPM1	Q7Z4N2	1603 aa		28.83	■■■□□ 2.21
NECAB3-209	ENST00000483813	ESCO1	Q5FWF5	840 aa		28.83	■■■□□ 2.21
NECAB3-209	ENST00000483813	CARD11	Q9BXL7	1154 aa		28.82	■■■□□ 2.2
NECAB3-209	ENST00000483813	ORAI2	Q96SN7	254 aa		28.81	■■■□□ 2.2
NECAB3-209	ENST00000483813	CENPJ	Q9HC77	1338 aa	Predicted RBP	28.79	■■■□□ 2.2
NECAB3-209	ENST00000483813	ARHGEF28	Q8N1W1	1705 aa	Known RBP	28.78	■■■□□ 2.2
NECAB3-209	ENST00000483813	EIF3A	Q14152	1382 aa	Known RBP	28.75	■■■□□ 2.19
NECAB3-209	ENST00000483813	WASL	O00401	505 aa	Predicted RBP	28.75	■■■□□ 2.19
NECAB3-209	ENST00000483813	RALGAPB	Q86X10	1494 aa		28.74	■■■□□ 2.19
NECAB3-209	ENST00000483813	DDX17	Q92841	729 aa	Known RBP	28.74	■■■□□ 2.19
NECAB3-209	ENST00000483813	PHLPP1	O60346	1717 aa		28.73	■■■□□ 2.19
NECAB3-209	ENST00000483813	GPRASP1	Q5JY77	1395 aa		28.71	■■■□□ 2.19
NECAB3-209	ENST00000483813	FMN2	Q9NZ56	1722 aa		28.71	■■■□□ 2.19
NECAB3-209	ENST00000483813	CDK19	Q9BWU1	502 aa		28.7	■■■□□ 2.18
NECAB3-209	ENST00000483813	ADGRB2	O60241	1585 aa		28.69	■■■□□ 2.18
NECAB3-209	ENST00000483813	FOXO3	O43524	673 aa		28.68	■■■□□ 2.18
NECAB3-209	ENST00000483813	SRPK2	P78362	688 aa	Known RBP	28.67	■■■□□ 2.18
NECAB3-209	ENST00000483813	PHF8	Q9UPP1	1060 aa		28.67	■■■□□ 2.18
NECAB3-209	ENST00000483813	AHDC1	Q5TGY3	1603 aa	Predicted RBP	28.67	■■■□□ 2.18
NECAB3-209	ENST00000483813	NPHP3	Q7Z494	1330 aa		28.66	■■■□□ 2.18
NECAB3-209	ENST00000483813	ANKAR	Q7Z5J8	1434 aa		28.65	■■■□□ 2.18
NECAB3-209	ENST00000483813	XPC	Q01831	940 aa	Predicted RBP	28.64	■■■□□ 2.18
NECAB3-209	ENST00000483813	PMFBP1	Q8TBY8	1022 aa		28.64	■■■□□ 2.18
NECAB3-209	ENST00000483813	LRRC59	Q96AG4	307 aa	Known RBP	28.64	■■■□□ 2.18
NECAB3-209	ENST00000483813	JCAD	Q9P266	1359 aa		28.63	■■■□□ 2.17
NECAB3-209	ENST00000483813	NUDT16	Q96DE0	195 aa	Known RBP	28.63	■■■□□ 2.17
NECAB3-209	ENST00000483813	QRICH2	Q9H0J4	1663 aa		28.62	■■■□□ 2.17
NECAB3-209	ENST00000483813	TULP4	Q9NRJ4	1543 aa		28.62	■■■□□ 2.17
NECAB3-209	ENST00000483813	COL16A1	Q07092	1604 aa	Predicted RBP	28.61	■■■□□ 2.17
NECAB3-209	ENST00000483813	EVC2	Q86UK5	1308 aa		28.61	■■■□□ 2.17
NECAB3-209	ENST00000483813	PRR36	Q9H6K5	1346 aa		28.61	■■■□□ 2.17
NECAB3-209	ENST00000483813	NHSL1	Q5SYE7	1610 aa		28.61	■■■□□ 2.17
NECAB3-209	ENST00000483813	PSME1	Q06323	249 aa		28.6	■■■□□ 2.17
NECAB3-209	ENST00000483813	CABP2	Q9NPB3	220 aa		28.6	■■■□□ 2.17
NECAB3-209	ENST00000483813	NGDN	Q8NEJ9	315 aa	Known RBP	28.58	■■■□□ 2.17
NECAB3-209	ENST00000483813	KRT28	Q7Z3Y7	464 aa		28.57	■■■□□ 2.16
NECAB3-209	ENST00000483813	SOS2	Q07890	1332 aa	Predicted RBP	28.57	■■■□□ 2.16
NECAB3-209	ENST00000483813	RGPD8	O14715	1765 aa	Predicted RBP	28.56	■■■□□ 2.16
NECAB3-209	ENST00000483813	KIF1A	Q12756	1690 aa		28.56	■■■□□ 2.16
NECAB3-209	ENST00000483813	USP32	Q8NFA0	1604 aa		28.55	■■■□□ 2.16
NECAB3-209	ENST00000483813	CCDC61	Q9Y6R9	512 aa		28.55	■■■□□ 2.16
NECAB3-209	ENST00000483813	ST20-MTHFS	A0A0A6YYL1	179 aa		28.54	■■■□□ 2.16
NECAB3-209	ENST00000483813	NUTM2B	A6NNL0	878 aa	Predicted RBP	28.53	■■■□□ 2.16
NECAB3-209	ENST00000483813	NUTM2E	B1AL46	878 aa	Predicted RBP	28.53	■■■□□ 2.16
NECAB3-209	ENST00000483813	NUTM2A	Q8IVF1	878 aa	Predicted RBP	28.53	■■■□□ 2.16
NECAB3-209	ENST00000483813	ATP7B	P35670	1465 aa		28.52	■■■□□ 2.16
NECAB3-209	ENST00000483813	USP47	Q96K76	1375 aa		28.51	■■■□□ 2.16
NECAB3-209	ENST00000483813	DISP3	Q9P2K9	1392 aa		28.51	■■■□□ 2.16
NECAB3-209	ENST00000483813	LMOD2	Q6P5Q4	547 aa		28.51	■■■□□ 2.15
NECAB3-209	ENST00000483813	PHF23	Q9BUL5	403 aa	Predicted RBP	28.51	■■■□□ 2.15
NECAB3-209	ENST00000483813	SPATA31A6	Q5VVP1	1343 aa		28.5	■■■□□ 2.15
NECAB3-209	ENST00000483813	PXDN	Q92626	1479 aa		28.49	■■■□□ 2.15
NECAB3-209	ENST00000483813	MEX3C	Q5U5Q3	659 aa	Known RBP	28.49	■■■□□ 2.15
NECAB3-209	ENST00000483813	MED1	Q15648	1581 aa	Predicted RBP	28.47	■■■□□ 2.15
NECAB3-209	ENST00000483813	PNPLA6	Q8IY17	1366 aa		28.47	■■■□□ 2.15
NECAB3-209	ENST00000483813	SBNO2	Q9Y2G9	1366 aa		28.47	■■■□□ 2.15
NECAB3-209	ENST00000483813	PPIP5K1	Q6PFW1	1433 aa		28.46	■■■□□ 2.15
NECAB3-209	ENST00000483813	SLC24A1	O60721	1099 aa		28.46	■■■□□ 2.15
NECAB3-209	ENST00000483813	PAK3	O75914	559 aa	Predicted RBP	28.46	■■■□□ 2.15
NECAB3-209	ENST00000483813	ITSN1	Q15811	1721 aa		28.46	■■■□□ 2.15
NECAB3-209	ENST00000483813	PLEKHG5	O94827	1062 aa		28.45	■■■□□ 2.14
NECAB3-209	ENST00000483813	CABP1	Q9NZU7	370 aa		28.45	■■■□□ 2.14
NECAB3-209	ENST00000483813	ACE	P12821	1306 aa		28.44	■■■□□ 2.14
NECAB3-209	ENST00000483813	PLEKHG3	A1L390	1219 aa		28.44	■■■□□ 2.14
NECAB3-209	ENST00000483813	SHPRH	Q149N8	1683 aa		28.44	■■■□□ 2.14
NECAB3-209	ENST00000483813	SPATA31A3	Q5VYP0	1347 aa		28.43	■■■□□ 2.14
NECAB3-209	ENST00000483813	SBNO1	A3KN83	1393 aa		28.4	■■■□□ 2.14
NECAB3-209	ENST00000483813	ATAD2	Q6PL18	1390 aa		28.4	■■■□□ 2.14
NECAB3-209	ENST00000483813	HAP1	P54257	671 aa	Predicted RBP	28.4	■■■□□ 2.14
NECAB3-209	ENST00000483813	TMC1	Q8TDI8	760 aa		28.4	■■■□□ 2.14
NECAB3-209	ENST00000483813	TESK2	Q96S53	571 aa		28.4	■■■□□ 2.14
NECAB3-209	ENST00000483813	TMF1	P82094	1093 aa		28.39	■■■□□ 2.14
NECAB3-209	ENST00000483813	TNS3	Q68CZ2	1445 aa		28.38	■■■□□ 2.13
NECAB3-209	ENST00000483813	ADAMTS2	O95450	1211 aa		28.38	■■■□□ 2.13
NECAB3-209	ENST00000483813	EIF4G2	P78344	907 aa	Known RBP eCLIP	28.38	■■■□□ 2.13	1e-8	■■■■■ 29.7
NECAB3-209	ENST00000483813	TOPAZ1	Q8N9V7	1692 aa		28.37	■■■□□ 2.13
NECAB3-209	ENST00000483813	POLR3A	O14802	1390 aa	Predicted RBP	28.37	■■■□□ 2.13
NECAB3-209	ENST00000483813	ARHGEF10	O15013	1369 aa		28.36	■■■□□ 2.13
NECAB3-209	ENST00000483813	LRP6	O75581	1613 aa		28.35	■■■□□ 2.13
NECAB3-209	ENST00000483813	C8orf37	Q96NL8	207 aa		28.32	■■■□□ 2.12
NECAB3-209	ENST00000483813	CDCA8	Q53HL2	280 aa		28.31	■■■□□ 2.12
NECAB3-209	ENST00000483813	CABLES1	Q8TDN4	633 aa		28.31	■■■□□ 2.12
NECAB3-209	ENST00000483813	HSPA5	P11021	654 aa	Known RBP	28.3	■■■□□ 2.12
NECAB3-209	ENST00000483813	PUS7	Q96PZ0	661 aa	Known RBP	28.3	■■■□□ 2.12
NECAB3-209	ENST00000483813	ZNF692	Q9BU19	519 aa	Predicted RBP	28.29	■■■□□ 2.12

Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms