RNA–Protein interactions for RNA: ENST00000483508.5

SORT1-205, Transcript of sortilin 1, humanhuman

TSL 3

Gene SORT1, Length 759 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-205ENST00000483508 RXRBP28702 533 aa11.21□□□□□ -0.61
SORT1-205ENST00000483508 KIF1BO60333 1816 aa11.21□□□□□ -0.62
SORT1-205ENST00000483508 LRP6O75581 1613 aa11.2□□□□□ -0.62
SORT1-205ENST00000483508 SETBP1Q9Y6X0 1596 aa11.2□□□□□ -0.62
SORT1-205ENST00000483508 SLC4A1APQ9BWU0 796 aaKnown RBP11.2□□□□□ -0.62
SORT1-205ENST00000483508 SPATA31E1Q6ZUB1 1445 aa11.19□□□□□ -0.62
SORT1-205ENST00000483508 METP08581 1390 aa11.19□□□□□ -0.62
SORT1-205ENST00000483508 ASXL1Q8IXJ9 1541 aa11.19□□□□□ -0.62
SORT1-205ENST00000483508 XRN1Q8IZH2 1706 aaKnown RBP11.18□□□□□ -0.62
SORT1-205ENST00000483508 CLTCL1P53675 1640 aa11.18□□□□□ -0.62
SORT1-205ENST00000483508 NRXN3Q9Y4C0 1643 aa11.18□□□□□ -0.62
SORT1-205ENST00000483508 C8orf37Q96NL8 207 aa11.18□□□□□ -0.62
SORT1-205ENST00000483508 MST1RQ04912 1400 aa11.18□□□□□ -0.62
SORT1-205ENST00000483508 AFF2P51816 1311 aa11.17□□□□□ -0.62
SORT1-205ENST00000483508 FKBP8Q14318 412 aa11.17□□□□□ -0.62
SORT1-205ENST00000483508 DDX17Q92841 729 aaKnown RBP11.17□□□□□ -0.62
SORT1-205ENST00000483508 ADGRL3Q9HAR2 1447 aa11.17□□□□□ -0.62
SORT1-205ENST00000483508 NEXMIFQ5QGS0 1516 aa11.16□□□□□ -0.62
SORT1-205ENST00000483508 RPGRIP1LQ68CZ1 1315 aa11.15□□□□□ -0.62
SORT1-205ENST00000483508 RALGAPBQ86X10 1494 aa11.15□□□□□ -0.62
SORT1-205ENST00000483508 NBPF8Q3BBV2 869 aa11.15□□□□□ -0.62
SORT1-205ENST00000483508 UPF1Q92900 1129 aaKnown RBP eCLIP11.15□□□□□ -0.62
SORT1-205ENST00000483508 NGLY1Q96IV0 654 aa11.15□□□□□ -0.62
SORT1-205ENST00000483508 QTRT2Q9H974 415 aaKnown RBP11.15□□□□□ -0.62
SORT1-205ENST00000483508 NHSL1Q5SYE7 1610 aa11.14□□□□□ -0.63
SORT1-205ENST00000483508 ADAMTS2O95450 1211 aa11.14□□□□□ -0.63
SORT1-205ENST00000483508 TSHZ2Q9NRE2 1034 aa11.14□□□□□ -0.63
SORT1-205ENST00000483508 NALCNQ8IZF0 1738 aa11.13□□□□□ -0.63
SORT1-205ENST00000483508 ERICH6BQ5W0A0 696 aa11.13□□□□□ -0.63
SORT1-205ENST00000483508 RBM6P78332 1123 aaKnown RBP11.12□□□□□ -0.63
SORT1-205ENST00000483508 ORAI2Q96SN7 254 aa11.12□□□□□ -0.63
SORT1-205ENST00000483508 ROCK2O75116 1388 aaKnown RBP11.12□□□□□ -0.63
SORT1-205ENST00000483508 PNPLA6Q8IY17 1366 aa11.12□□□□□ -0.63
SORT1-205ENST00000483508 C1orf167Q5SNV9 1468 aa11.12□□□□□ -0.63
SORT1-205ENST00000483508 HNRNPUQ00839 825 aaKnown RBP eCLIP11.11□□□□□ -0.63
SORT1-205ENST00000483508 RGL3Q3MIN7 710 aa11.11□□□□□ -0.63
SORT1-205ENST00000483508 ESCO1Q5FWF5 840 aa11.11□□□□□ -0.63
SORT1-205ENST00000483508 PRKRIP1Q9H875 184 aaPredicted RBP11.11□□□□□ -0.63
SORT1-205ENST00000483508 CDK12Q9NYV4 1490 aaPredicted RBP11.11□□□□□ -0.63
SORT1-205ENST00000483508 KIF7Q2M1P5 1343 aa11.1□□□□□ -0.63
SORT1-205ENST00000483508 PTCH1Q13635 1447 aa11.1□□□□□ -0.63
SORT1-205ENST00000483508 LAMC1P11047 1609 aa11.1□□□□□ -0.63
SORT1-205ENST00000483508 STK26Q9P289 416 aa11.1□□□□□ -0.63
SORT1-205ENST00000483508 USP21Q9UK80 565 aa11.1□□□□□ -0.63
SORT1-205ENST00000483508 ROBO2Q9HCK4 1378 aa11.1□□□□□ -0.63
SORT1-205ENST00000483508 USP47Q96K76 1375 aa11.09□□□□□ -0.63
SORT1-205ENST00000483508 CCDC144AA2RUR9 1427 aa11.09□□□□□ -0.63
SORT1-205ENST00000483508 C11orf95C9JLR9 678 aaPredicted RBP11.08□□□□□ -0.64
SORT1-205ENST00000483508 TRPC5Q9UL62 973 aaPredicted RBP11.08□□□□□ -0.64
SORT1-205ENST00000483508 TRPM1Q7Z4N2 1603 aa11.08□□□□□ -0.64
SORT1-205ENST00000483508 PPLO60437 1756 aa11.08□□□□□ -0.64
SORT1-205ENST00000483508 SOS2Q07890 1332 aaPredicted RBP11.08□□□□□ -0.64
SORT1-205ENST00000483508 NPHP3Q7Z494 1330 aa11.08□□□□□ -0.64
SORT1-205ENST00000483508 LRPPRCP42704 1394 aaKnown RBP11.07□□□□□ -0.64
SORT1-205ENST00000483508 NUTM2FA1L443 756 aa11.07□□□□□ -0.64
SORT1-205ENST00000483508 ZBED9Q6R2W3 1325 aa11.07□□□□□ -0.64
SORT1-205ENST00000483508 FOXO3O43524 673 aa11.06□□□□□ -0.64
SORT1-205ENST00000483508 ADGRF5Q8IZF2 1346 aa11.06□□□□□ -0.64
SORT1-205ENST00000483508 KTN1Q86UP2 1357 aaKnown RBP11.05□□□□□ -0.64
SORT1-205ENST00000483508 RGS12O14924 1447 aa11.05□□□□□ -0.64
SORT1-205ENST00000483508 HAP1P54257 671 aaPredicted RBP11.05□□□□□ -0.64
SORT1-205ENST00000483508 XPCQ01831 940 aaPredicted RBP11.05□□□□□ -0.64
SORT1-205ENST00000483508 WAPLQ7Z5K2 1190 aa11.05□□□□□ -0.64
SORT1-205ENST00000483508 MRS2Q9HD23 443 aa11.05□□□□□ -0.64
SORT1-205ENST00000483508 ATAD2Q6PL18 1390 aa11.04□□□□□ -0.64
SORT1-205ENST00000483508 IFT172Q9UG01 1749 aa11.04□□□□□ -0.64
SORT1-205ENST00000483508 TMEM132EQ6IEE7 984 aa11.04□□□□□ -0.64
SORT1-205ENST00000483508 PRAG1Q86YV5 1406 aa11.02□□□□□ -0.64
SORT1-205ENST00000483508 FNBP4Q8N3X1 1017 aaPredicted RBP11.02□□□□□ -0.65
SORT1-205ENST00000483508 CDC42BPGQ6DT37 1551 aa11.02□□□□□ -0.65
SORT1-205ENST00000483508 PLEKHG5O94827 1062 aa11.01□□□□□ -0.65
SORT1-205ENST00000483508 COL22A1Q8NFW1 1626 aaPredicted RBP11□□□□□ -0.65
SORT1-205ENST00000483508 PSME1Q06323 249 aa11□□□□□ -0.65
SORT1-205ENST00000483508 LMOD2Q6P5Q4 547 aa11□□□□□ -0.65
SORT1-205ENST00000483508 ABCC11Q96J66 1382 aa11□□□□□ -0.65
SORT1-205ENST00000483508 SMG6Q86US8 1419 aaKnown RBP11□□□□□ -0.65
SORT1-205ENST00000483508 CCDC184Q52MB2 194 aa10.99□□□□□ -0.65
SORT1-205ENST00000483508 KRT28Q7Z3Y7 464 aa10.99□□□□□ -0.65
SORT1-205ENST00000483508 POTEDQ86YR6 584 aa10.99□□□□□ -0.65
SORT1-205ENST00000483508 CARD11Q9BXL7 1154 aa10.99□□□□□ -0.65
SORT1-205ENST00000483508 PPP4R2Q9NY27 417 aa10.99□□□□□ -0.65
SORT1-205ENST00000483508 POGKQ9P215 609 aa10.99□□□□□ -0.65
SORT1-205ENST00000483508 CCDC9Q9Y3X0 531 aaKnown RBP10.99□□□□□ -0.65
SORT1-205ENST00000483508 ATRNO75882 1429 aa10.99□□□□□ -0.65
SORT1-205ENST00000483508 YTHDC2Q9H6S0 1430 aaKnown RBP10.99□□□□□ -0.65
SORT1-205ENST00000483508 SAFB2Q14151 953 aaKnown RBP eCLIP10.98□□□□□ -0.65
SORT1-205ENST00000483508 FAM9BQ8IZU0 186 aa10.98□□□□□ -0.65
SORT1-205ENST00000483508 GJD4Q96KN9 370 aaPredicted RBP10.98□□□□□ -0.65
SORT1-205ENST00000483508 ZRANB1Q9UGI0 708 aa10.98□□□□□ -0.65
SORT1-205ENST00000483508 GPRASP1Q5JY77 1395 aa10.98□□□□□ -0.65
SORT1-205ENST00000483508 PLEKHH1Q9ULM0 1364 aa10.98□□□□□ -0.65
SORT1-205ENST00000483508 PXDNQ92626 1479 aa10.98□□□□□ -0.65
SORT1-205ENST00000483508 KNDC1Q76NI1 1749 aa10.98□□□□□ -0.65
SORT1-205ENST00000483508 MARF1Q9Y4F3 1742 aaKnown RBP10.98□□□□□ -0.65
SORT1-205ENST00000483508 CCDC125Q86Z20 511 aa10.97□□□□□ -0.65
SORT1-205ENST00000483508 UNC5CLQ8IV45 518 aa10.97□□□□□ -0.65
SORT1-205ENST00000483508 PHF8Q9UPP1 1060 aa10.97□□□□□ -0.65
SORT1-205ENST00000483508 TECPR2O15040 1411 aa10.97□□□□□ -0.65
SORT1-205ENST00000483508 MYOM2P54296 1465 aa10.97□□□□□ -0.65
SORT1-205ENST00000483508 KIF1AQ12756 1690 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms