RNA–Protein interactions for RNA: ENST00000481573.1

SEC61B-202, Transcript of Sec61 translocon beta subunit, humanhuman

TSL 2

Gene SEC61B, Length 687 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61B-202ENST00000481573 WAPLQ7Z5K2 1190 aa18.69■□□□□ 0.58
SEC61B-202ENST00000481573 SIRT1Q96EB6 747 aa18.69■□□□□ 0.58
SEC61B-202ENST00000481573 PRAM1Q96QH2 718 aa18.68■□□□□ 0.58
SEC61B-202ENST00000481573 EIF3AQ14152 1382 aaKnown RBP18.68■□□□□ 0.58
SEC61B-202ENST00000481573 RGPD8O14715 1765 aaPredicted RBP18.67■□□□□ 0.58
SEC61B-202ENST00000481573 RBM33Q96EV2 1170 aaKnown RBP18.66■□□□□ 0.58
SEC61B-202ENST00000481573 CENPJQ9HC77 1338 aaPredicted RBP18.66■□□□□ 0.58
SEC61B-202ENST00000481573 FMN2Q9NZ56 1722 aa18.66■□□□□ 0.58
SEC61B-202ENST00000481573 IQSEC2Q5JU85 1478 aa18.65■□□□□ 0.58
SEC61B-202ENST00000481573 TULP4Q9NRJ4 1543 aa18.65■□□□□ 0.58
SEC61B-202ENST00000481573 ST20-MTHFSA0A0A6YYL1 179 aa18.65■□□□□ 0.58
SEC61B-202ENST00000481573 HSPA5P11021 654 aaKnown RBP18.65■□□□□ 0.58
SEC61B-202ENST00000481573 POTEDQ86YR6 584 aa18.65■□□□□ 0.58
SEC61B-202ENST00000481573 TMEM94Q12767 1356 aa18.65■□□□□ 0.58
SEC61B-202ENST00000481573 CDC42BPGQ6DT37 1551 aa18.64■□□□□ 0.58
SEC61B-202ENST00000481573 EIF4G2P78344 907 aaKnown RBP eCLIP18.64■□□□□ 0.57
SEC61B-202ENST00000481573 SAFB2Q14151 953 aaKnown RBP eCLIP18.64■□□□□ 0.57
SEC61B-202ENST00000481573 ADGRL3Q9HAR2 1447 aa18.64■□□□□ 0.57
SEC61B-202ENST00000481573 PROSER2Q86WR7 435 aaPredicted RBP18.63■□□□□ 0.57
SEC61B-202ENST00000481573 SBNO2Q9Y2G9 1366 aa18.63■□□□□ 0.57
SEC61B-202ENST00000481573 TESK2Q96S53 571 aa18.62■□□□□ 0.57
SEC61B-202ENST00000481573 HIRIP3Q9BW71 556 aaPredicted RBP18.62■□□□□ 0.57
SEC61B-202ENST00000481573 POGKQ9P215 609 aa18.62■□□□□ 0.57
SEC61B-202ENST00000481573 USP32Q8NFA0 1604 aa18.62■□□□□ 0.57
SEC61B-202ENST00000481573 NCOA3Q9Y6Q9 1424 aa18.61■□□□□ 0.57
SEC61B-202ENST00000481573 MINK1Q8N4C8 1332 aaPredicted RBP18.6■□□□□ 0.57
SEC61B-202ENST00000481573 TOPAZ1Q8N9V7 1692 aa18.6■□□□□ 0.57
SEC61B-202ENST00000481573 MED1Q15648 1581 aaPredicted RBP18.59■□□□□ 0.57
SEC61B-202ENST00000481573 ITSN1Q15811 1721 aa18.57■□□□□ 0.56
SEC61B-202ENST00000481573 MYOM1P52179 1685 aa18.57■□□□□ 0.56
SEC61B-202ENST00000481573 UBAP1LF5GYI3 381 aa18.57■□□□□ 0.56
SEC61B-202ENST00000481573 DCCP43146 1447 aa18.55■□□□□ 0.56
SEC61B-202ENST00000481573 ATP7BP35670 1465 aa18.52■□□□□ 0.56
SEC61B-202ENST00000481573 C11orf95C9JLR9 678 aaPredicted RBP18.52■□□□□ 0.56
SEC61B-202ENST00000481573 C14orf37Q86TY3 774 aa18.52■□□□□ 0.56
SEC61B-202ENST00000481573 MSH6P52701 1360 aa18.52■□□□□ 0.55
SEC61B-202ENST00000481573 WASLO00401 505 aaPredicted RBP18.51■□□□□ 0.55
SEC61B-202ENST00000481573 C19orf44Q9H6X5 657 aa18.51■□□□□ 0.55
SEC61B-202ENST00000481573 MST1RQ04912 1400 aa18.5■□□□□ 0.55
SEC61B-202ENST00000481573 AKAP12Q02952 1782 aa18.5■□□□□ 0.55
SEC61B-202ENST00000481573 EVC2Q86UK5 1308 aa18.49■□□□□ 0.55
SEC61B-202ENST00000481573 PRR36Q9H6K5 1346 aa18.49■□□□□ 0.55
SEC61B-202ENST00000481573 CDK19Q9BWU1 502 aa18.49■□□□□ 0.55
SEC61B-202ENST00000481573 TMF1P82094 1093 aa18.47■□□□□ 0.55
SEC61B-202ENST00000481573 CABP2Q9NPB3 220 aa18.47■□□□□ 0.55
SEC61B-202ENST00000481573 ANKARQ7Z5J8 1434 aa18.47■□□□□ 0.55
SEC61B-202ENST00000481573 C1orf167Q5SNV9 1468 aa18.46■□□□□ 0.55
SEC61B-202ENST00000481573 HSPA1LP34931 641 aa18.46■□□□□ 0.55
SEC61B-202ENST00000481573 KIF1AQ12756 1690 aa18.46■□□□□ 0.55
SEC61B-202ENST00000481573 KIF7Q2M1P5 1343 aa18.46■□□□□ 0.55
SEC61B-202ENST00000481573 ROBO1Q9Y6N7 1651 aa18.45■□□□□ 0.54
SEC61B-202ENST00000481573 NUTM2FA1L443 756 aa18.45■□□□□ 0.54
SEC61B-202ENST00000481573 CCDC7Q96M83 1385 aa18.44■□□□□ 0.54
SEC61B-202ENST00000481573 MON2Q7Z3U7 1717 aa18.44■□□□□ 0.54
SEC61B-202ENST00000481573 SLC24A1O60721 1099 aa18.44■□□□□ 0.54
SEC61B-202ENST00000481573 SRPK2P78362 688 aaKnown RBP18.44■□□□□ 0.54
SEC61B-202ENST00000481573 CADPS2Q86UW7 1296 aa18.44■□□□□ 0.54
SEC61B-202ENST00000481573 WASHC2AQ641Q2 1341 aa18.44■□□□□ 0.54
SEC61B-202ENST00000481573 ATF3P18847 181 aa18.43■□□□□ 0.54
SEC61B-202ENST00000481573 NHSL1Q5SYE7 1610 aa18.42■□□□□ 0.54
SEC61B-202ENST00000481573 NUDT16Q96DE0 195 aaKnown RBP18.42■□□□□ 0.54
SEC61B-202ENST00000481573 PUS7Q96PZ0 661 aaKnown RBP18.42■□□□□ 0.54
SEC61B-202ENST00000481573 ATAD2Q6PL18 1390 aa18.42■□□□□ 0.54
SEC61B-202ENST00000481573 PPIP5K1Q6PFW1 1433 aa18.4■□□□□ 0.54
SEC61B-202ENST00000481573 CD163L1Q9NR16 1453 aa18.4■□□□□ 0.54
SEC61B-202ENST00000481573 NRKQ7Z2Y5 1582 aa18.4■□□□□ 0.54
SEC61B-202ENST00000481573 ZNF316A6NFI3 1004 aaPredicted RBP18.39■□□□□ 0.53
SEC61B-202ENST00000481573 CDCA8Q53HL2 280 aa18.39■□□□□ 0.53
SEC61B-202ENST00000481573 TRPM3Q9HCF6 1732 aaPredicted RBP18.38■□□□□ 0.53
SEC61B-202ENST00000481573 SLAIN2Q9P270 581 aa18.38■□□□□ 0.53
SEC61B-202ENST00000481573 ORAI2Q96SN7 254 aa18.37■□□□□ 0.53
SEC61B-202ENST00000481573 CCDC61Q9Y6R9 512 aa18.37■□□□□ 0.53
SEC61B-202ENST00000481573 POLR3GLQ9BT43 218 aa18.36■□□□□ 0.53
SEC61B-202ENST00000481573 NINLQ9Y2I6 1382 aa18.35■□□□□ 0.53
SEC61B-202ENST00000481573 SCAF1Q9H7N4 1312 aaKnown RBP18.35■□□□□ 0.53
SEC61B-202ENST00000481573 SLC12A5Q9H2X9 1139 aa18.35■□□□□ 0.53
SEC61B-202ENST00000481573 CABP1Q9NZU7 370 aa18.35■□□□□ 0.53
SEC61B-202ENST00000481573 POLR3AO14802 1390 aaPredicted RBP18.34■□□□□ 0.53
SEC61B-202ENST00000481573 PLEKHG3A1L390 1219 aa18.34■□□□□ 0.53
SEC61B-202ENST00000481573 ESCO1Q5FWF5 840 aa18.34■□□□□ 0.53
SEC61B-202ENST00000481573 BRINP3Q76B58 766 aa18.34■□□□□ 0.53
SEC61B-202ENST00000481573 KIF20BQ96Q89 1820 aa18.34■□□□□ 0.53
SEC61B-202ENST00000481573 AHDC1Q5TGY3 1603 aaPredicted RBP18.34■□□□□ 0.53
SEC61B-202ENST00000481573 CPSF1Q10570 1443 aaKnown RBP18.33■□□□□ 0.53
SEC61B-202ENST00000481573 PHLPP1O60346 1717 aa18.33■□□□□ 0.52
SEC61B-202ENST00000481573 PIP4K2BP78356 416 aa18.33■□□□□ 0.52
SEC61B-202ENST00000481573 PMFBP1Q8TBY8 1022 aa18.33■□□□□ 0.52
SEC61B-202ENST00000481573 PHF8Q9UPP1 1060 aa18.33■□□□□ 0.52
SEC61B-202ENST00000481573 TOM1O60784 492 aa18.32■□□□□ 0.52
SEC61B-202ENST00000481573 TMC1Q8TDI8 760 aa18.32■□□□□ 0.52
SEC61B-202ENST00000481573 MARF1Q9Y4F3 1742 aaKnown RBP18.32■□□□□ 0.52
SEC61B-202ENST00000481573 ALS2Q96Q42 1657 aa18.31■□□□□ 0.52
SEC61B-202ENST00000481573 A0A1W2PP64 1363 aa18.31■□□□□ 0.52
SEC61B-202ENST00000481573 PXDNQ92626 1479 aa18.31■□□□□ 0.52
SEC61B-202ENST00000481573 ANKRD36BQ8N2N9 1353 aa18.3■□□□□ 0.52
SEC61B-202ENST00000481573 ACEP12821 1306 aa18.3■□□□□ 0.52
SEC61B-202ENST00000481573 COL16A1Q07092 1604 aaPredicted RBP18.3■□□□□ 0.52
SEC61B-202ENST00000481573 ANKRD26Q9UPS8 1709 aa18.29■□□□□ 0.52
SEC61B-202ENST00000481573 PIK3C2AO00443 1686 aa18.29■□□□□ 0.52
SEC61B-202ENST00000481573 USP6P35125 1406 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms