RNA–Protein interactions for RNA: ENST00000481522.1

COPA-204, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 2

Gene COPA, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-204ENST00000481522 ADAMTS8Q9UP79 889 aa9.68□□□□□ -0.86
COPA-204ENST00000481522 FOXK2Q01167 660 aa9.65□□□□□ -0.86
COPA-204ENST00000481522 KRTAP4-8A0A0G2JLE6 195 aa9.63□□□□□ -0.87
COPA-204ENST00000481522 NPDC1Q9NQX5 325 aaPredicted RBP9.63□□□□□ -0.87
COPA-204ENST00000481522 GRXCR2A6NFK2 248 aa9.62□□□□□ -0.87
COPA-204ENST00000481522 Q8N3U1 123 aa9.61□□□□□ -0.87
COPA-204ENST00000481522 SPRYD3Q8NCJ5 442 aa9.61□□□□□ -0.87
COPA-204ENST00000481522 TMEM134Q9H6X4 195 aa9.61□□□□□ -0.87
COPA-204ENST00000481522 SLC10A3P09131 477 aa9.6□□□□□ -0.87
COPA-204ENST00000481522 PAXIP1Q6ZW49 1069 aaPredicted RBP9.6□□□□□ -0.87
COPA-204ENST00000481522 CFAP44Q96MT7 982 aa9.6□□□□□ -0.87
COPA-204ENST00000481522 DNAJB2P25686 324 aa9.59□□□□□ -0.87
COPA-204ENST00000481522 PUS10Q3MIT2 529 aaKnown RBP9.59□□□□□ -0.87
COPA-204ENST00000481522 TRIM32Q13049 653 aa9.58□□□□□ -0.88
COPA-204ENST00000481522 E2F4Q16254 413 aa9.58□□□□□ -0.88
COPA-204ENST00000481522 FAM160A2Q8N612 972 aaPredicted RBP9.58□□□□□ -0.88
COPA-204ENST00000481522 ARIH1Q9Y4X5 557 aaPredicted RBP9.58□□□□□ -0.88
COPA-204ENST00000481522 OSBPP22059 807 aa9.57□□□□□ -0.88
COPA-204ENST00000481522 IRS1P35568 1242 aa9.57□□□□□ -0.88
COPA-204ENST00000481522 THAP11Q96EK4 314 aa9.57□□□□□ -0.88
COPA-204ENST00000481522 PRDM9Q9NQV7 894 aa9.57□□□□□ -0.88
COPA-204ENST00000481522 ZBTB24O43167 697 aaPredicted RBP9.56□□□□□ -0.88
COPA-204ENST00000481522 REPIN1Q9BWE0 567 aaKnown RBP9.55□□□□□ -0.88
COPA-204ENST00000481522 KRT76Q01546 638 aa9.54□□□□□ -0.88
COPA-204ENST00000481522 ZFP42Q96MM3 310 aa9.54□□□□□ -0.88
COPA-204ENST00000481522 WDR70Q9NW82 654 aa9.51□□□□□ -0.89
COPA-204ENST00000481522 CAPN5O15484 640 aaPredicted RBP9.5□□□□□ -0.89
COPA-204ENST00000481522 PLCB2Q00722 1185 aa9.5□□□□□ -0.89
COPA-204ENST00000481522 KANK3Q6NY19 840 aa9.5□□□□□ -0.89
COPA-204ENST00000481522 ZNF385CQ66K41 422 aaPredicted RBP9.48□□□□□ -0.89
COPA-204ENST00000481522 SOBPA7XYQ1 873 aa9.47□□□□□ -0.89
COPA-204ENST00000481522 BTBD11A6QL63 1104 aa9.46□□□□□ -0.9
COPA-204ENST00000481522 ALDH1A1P00352 501 aa9.46□□□□□ -0.9
COPA-204ENST00000481522 ITGB2P05107 769 aa9.46□□□□□ -0.9
COPA-204ENST00000481522 SPOCK3Q9BQ16 436 aa9.46□□□□□ -0.9
COPA-204ENST00000481522 MSTNO14793 375 aa9.45□□□□□ -0.9
COPA-204ENST00000481522 SKOR1P84550 965 aa9.45□□□□□ -0.9
COPA-204ENST00000481522 RC3H1Q5TC82 1133 aaKnown RBP9.45□□□□□ -0.9
COPA-204ENST00000481522 RCCD1A6NED2 376 aa9.44□□□□□ -0.9
COPA-204ENST00000481522 MORN1Q5T089 497 aa9.44□□□□□ -0.9
COPA-204ENST00000481522 PLA2G4EQ3MJ16 856 aa9.43□□□□□ -0.9
COPA-204ENST00000481522 ARHGEF15O94989 841 aa9.42□□□□□ -0.9
COPA-204ENST00000481522 PROCP04070 461 aa9.41□□□□□ -0.9
COPA-204ENST00000481522 MSS51Q4VC12 460 aa9.41□□□□□ -0.9
COPA-204ENST00000481522 PPFIA3O75145 1194 aa9.4□□□□□ -0.9
COPA-204ENST00000481522 FMNL1O95466 1100 aaPredicted RBP9.4□□□□□ -0.9
COPA-204ENST00000481522 CNTNAP3BQ96NU0 1288 aa9.4□□□□□ -0.9
COPA-204ENST00000481522 CNTNAP3Q9BZ76 1288 aa9.4□□□□□ -0.9
COPA-204ENST00000481522 ADGRG1Q9Y653 693 aa9.4□□□□□ -0.9
COPA-204ENST00000481522 SVOPQ8N4V2 548 aa9.39□□□□□ -0.91
COPA-204ENST00000481522 RBM46Q8TBY0 533 aaKnown RBP9.39□□□□□ -0.91
COPA-204ENST00000481522 K7ELQ4 463 aaPredicted RBP9.38□□□□□ -0.91
COPA-204ENST00000481522 HAP1P54257 671 aaPredicted RBP9.38□□□□□ -0.91
COPA-204ENST00000481522 GPR161Q8N6U8 529 aaKnown RBP9.38□□□□□ -0.91
COPA-204ENST00000481522 SIAH2O43255 324 aa9.37□□□□□ -0.91
COPA-204ENST00000481522 WHAMMQ8TF30 809 aa9.37□□□□□ -0.91
COPA-204ENST00000481522 WNT7BP56706 349 aa9.36□□□□□ -0.91
COPA-204ENST00000481522 TSHZ2Q9NRE2 1034 aa9.36□□□□□ -0.91
COPA-204ENST00000481522 SALL2Q9Y467 1007 aaPredicted RBP9.36□□□□□ -0.91
COPA-204ENST00000481522 MRPL14Q6P1L8 145 aaKnown RBP9.35□□□□□ -0.91
COPA-204ENST00000481522 BRICD5Q6PL45 260 aa9.35□□□□□ -0.91
COPA-204ENST00000481522 SLC27A5Q9Y2P5 690 aa9.35□□□□□ -0.91
COPA-204ENST00000481522 FECHP22830 423 aa9.33□□□□□ -0.92
COPA-204ENST00000481522 KRTAP19-1Q8IUB9 90 aa9.33□□□□□ -0.92
COPA-204ENST00000481522 SCARF2Q96GP6 870 aaPredicted RBP9.33□□□□□ -0.92
COPA-204ENST00000481522 PURBQ96QR8 312 aaKnown RBP9.33□□□□□ -0.92
COPA-204ENST00000481522 PTGDRQ13258 359 aa9.32□□□□□ -0.92
COPA-204ENST00000481522 KRTAP4-7Q9BYR0 210 aa9.32□□□□□ -0.92
COPA-204ENST00000481522 MMP16P51512 607 aa9.31□□□□□ -0.92
COPA-204ENST00000481522 MARSP56192 900 aaKnown RBP9.31□□□□□ -0.92
COPA-204ENST00000481522 FUT2Q10981 343 aa9.3□□□□□ -0.92
COPA-204ENST00000481522 RNF19BQ6ZMZ0 732 aa9.3□□□□□ -0.92
COPA-204ENST00000481522 MLLT3P42568 568 aaPredicted RBP9.29□□□□□ -0.92
COPA-204ENST00000481522 FAM161AQ3B820 660 aa9.29□□□□□ -0.92
COPA-204ENST00000481522 DCAF5Q96JK2 942 aa9.29□□□□□ -0.92
COPA-204ENST00000481522 WASF2Q9Y6W5 498 aa9.29□□□□□ -0.92
COPA-204ENST00000481522 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.28□□□□□ -0.92
COPA-204ENST00000481522 SLURP2P0DP57 97 aa9.28□□□□□ -0.92
COPA-204ENST00000481522 RNFT1Q5M7Z0 435 aa9.28□□□□□ -0.92
COPA-204ENST00000481522 SCARF1Q14162 830 aa9.27□□□□□ -0.93
COPA-204ENST00000481522 COL25A1Q9BXS0 654 aaPredicted RBP9.27□□□□□ -0.93
COPA-204ENST00000481522 ATP6V1AP38606 617 aa9.25□□□□□ -0.93
COPA-204ENST00000481522 ARHGEF1Q92888 912 aaKnown RBP9.25□□□□□ -0.93
COPA-204ENST00000481522 SLC24A1O60721 1099 aa9.24□□□□□ -0.93
COPA-204ENST00000481522 GALNT6Q8NCL4 622 aa9.24□□□□□ -0.93
COPA-204ENST00000481522 NUTM2FA1L443 756 aa9.23□□□□□ -0.93
COPA-204ENST00000481522 DXOO77932 396 aaKnown RBP9.22□□□□□ -0.93
COPA-204ENST00000481522 RSPH4AQ5TD94 716 aa9.22□□□□□ -0.93
COPA-204ENST00000481522 MAN1A2O60476 641 aa9.21□□□□□ -0.94
COPA-204ENST00000481522 OATP04181 439 aa9.19□□□□□ -0.94
COPA-204ENST00000481522 TIMP2P16035 220 aa9.19□□□□□ -0.94
COPA-204ENST00000481522 VSIG10Q8N0Z9 540 aa9.19□□□□□ -0.94
COPA-204ENST00000481522 PXYLP1Q8TE99 480 aa9.19□□□□□ -0.94
COPA-204ENST00000481522 FCHSD2O94868 740 aa9.18□□□□□ -0.94
COPA-204ENST00000481522 BAG6P46379 1132 aa9.18□□□□□ -0.94
COPA-204ENST00000481522 EHBP1Q8NDI1 1231 aa9.18□□□□□ -0.94
COPA-204ENST00000481522 P3H3Q8IVL6 736 aa9.17□□□□□ -0.94
COPA-204ENST00000481522 KCNV2Q8TDN2 545 aa9.16□□□□□ -0.94
COPA-204ENST00000481522 NANOS1Q8WY41 292 aaKnown RBP9.15□□□□□ -0.94
COPA-204ENST00000481522 LCE1DQ5T752 114 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms