RNA–Protein interactions for RNA: ENST00000478997.3

RN7SL549P-201, Transcript of RNA, 7SL, cytoplasmic 549, pseudogene, humanhuman

BASIC

Gene RN7SL549P, Length 282 nt, Biotype misc RNA.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL549P-201ENST00000478997 PHF23Q9BUL5 403 aaPredicted RBP11.17□□□□□ -0.62
RN7SL549P-201ENST00000478997 FMN2Q9NZ56 1722 aa11.17□□□□□ -0.62
RN7SL549P-201ENST00000478997 PLEKHH1Q9ULM0 1364 aa11.16□□□□□ -0.62
RN7SL549P-201ENST00000478997 STK26Q9P289 416 aa11.16□□□□□ -0.62
RN7SL549P-201ENST00000478997 ADGRB2O60241 1585 aa11.16□□□□□ -0.62
RN7SL549P-201ENST00000478997 KIAA1210Q9ULL0 1709 aa11.15□□□□□ -0.62
RN7SL549P-201ENST00000478997 WAPLQ7Z5K2 1190 aa11.15□□□□□ -0.62
RN7SL549P-201ENST00000478997 DCAF11Q8TEB1 546 aa11.15□□□□□ -0.62
RN7SL549P-201ENST00000478997 LRP6O75581 1613 aa11.15□□□□□ -0.62
RN7SL549P-201ENST00000478997 SOS2Q07890 1332 aaPredicted RBP11.14□□□□□ -0.63
RN7SL549P-201ENST00000478997 SOCS7O14512 581 aa11.14□□□□□ -0.63
RN7SL549P-201ENST00000478997 RGS17Q9UGC6 210 aaPredicted RBP11.14□□□□□ -0.63
RN7SL549P-201ENST00000478997 KIF1AQ12756 1690 aa11.14□□□□□ -0.63
RN7SL549P-201ENST00000478997 LRRC59Q96AG4 307 aaKnown RBP11.13□□□□□ -0.63
RN7SL549P-201ENST00000478997 ORAI2Q96SN7 254 aa11.13□□□□□ -0.63
RN7SL549P-201ENST00000478997 PNPLA6Q8IY17 1366 aa11.13□□□□□ -0.63
RN7SL549P-201ENST00000478997 ARHGEF28Q8N1W1 1705 aaKnown RBP11.12□□□□□ -0.63
RN7SL549P-201ENST00000478997 PXDNQ92626 1479 aa11.12□□□□□ -0.63
RN7SL549P-201ENST00000478997 NPHP3Q7Z494 1330 aa11.11□□□□□ -0.63
RN7SL549P-201ENST00000478997 COL22A1Q8NFW1 1626 aaPredicted RBP11.11□□□□□ -0.63
RN7SL549P-201ENST00000478997 PRAM1Q96QH2 718 aa11.11□□□□□ -0.63
RN7SL549P-201ENST00000478997 KDM2AQ9Y2K7 1162 aa11.11□□□□□ -0.63
RN7SL549P-201ENST00000478997 ANKARQ7Z5J8 1434 aa11.1□□□□□ -0.63
RN7SL549P-201ENST00000478997 DDX17Q92841 729 aaKnown RBP11.1□□□□□ -0.63
RN7SL549P-201ENST00000478997 ESCO1Q5FWF5 840 aa11.09□□□□□ -0.63
RN7SL549P-201ENST00000478997 USP32Q8NFA0 1604 aa11.09□□□□□ -0.63
RN7SL549P-201ENST00000478997 EIF3AQ14152 1382 aaKnown RBP11.08□□□□□ -0.64
RN7SL549P-201ENST00000478997 POGKQ9P215 609 aa11.08□□□□□ -0.64
RN7SL549P-201ENST00000478997 TRAK1Q9UPV9 953 aa11.08□□□□□ -0.64
RN7SL549P-201ENST00000478997 POTEAQ6S8J7 498 aa11.07□□□□□ -0.64
RN7SL549P-201ENST00000478997 TULP4Q9NRJ4 1543 aa11.07□□□□□ -0.64
RN7SL549P-201ENST00000478997 RGPD8O14715 1765 aaPredicted RBP11.07□□□□□ -0.64
RN7SL549P-201ENST00000478997 TRIM26Q12899 539 aaPredicted RBP11.06□□□□□ -0.64
RN7SL549P-201ENST00000478997 NUTM2FA1L443 756 aa11.05□□□□□ -0.64
RN7SL549P-201ENST00000478997 FOXO3O43524 673 aa11.05□□□□□ -0.64
RN7SL549P-201ENST00000478997 SAFB2Q14151 953 aaKnown RBP eCLIP11.05□□□□□ -0.64
RN7SL549P-201ENST00000478997 MEX3CQ5U5Q3 659 aaKnown RBP11.05□□□□□ -0.64
RN7SL549P-201ENST00000478997 ZNF772Q68DY9 489 aaPredicted RBP11.05□□□□□ -0.64
RN7SL549P-201ENST00000478997 L3MBTL2Q969R5 705 aa11.05□□□□□ -0.64
RN7SL549P-201ENST00000478997 PHF8Q9UPP1 1060 aa11.04□□□□□ -0.64
RN7SL549P-201ENST00000478997 TRPM1Q7Z4N2 1603 aa11.04□□□□□ -0.64
RN7SL549P-201ENST00000478997 ITSN1Q15811 1721 aa11.04□□□□□ -0.64
RN7SL549P-201ENST00000478997 SBNO1A3KN83 1393 aa11.03□□□□□ -0.64
RN7SL549P-201ENST00000478997 NUTM2BA6NNL0 878 aaPredicted RBP11.03□□□□□ -0.64
RN7SL549P-201ENST00000478997 NUTM2EB1AL46 878 aaPredicted RBP11.03□□□□□ -0.64
RN7SL549P-201ENST00000478997 WASLO00401 505 aaPredicted RBP11.03□□□□□ -0.64
RN7SL549P-201ENST00000478997 NUTM2AQ8IVF1 878 aaPredicted RBP11.03□□□□□ -0.64
RN7SL549P-201ENST00000478997 SIN3AQ96ST3 1273 aa11.03□□□□□ -0.64
RN7SL549P-201ENST00000478997 ATP7BP35670 1465 aa11.03□□□□□ -0.64
RN7SL549P-201ENST00000478997 MARF1Q9Y4F3 1742 aaKnown RBP11.03□□□□□ -0.64
RN7SL549P-201ENST00000478997 SPATA31A3Q5VYP0 1347 aa11.03□□□□□ -0.64
RN7SL549P-201ENST00000478997 MINK1Q8N4C8 1332 aaPredicted RBP11.03□□□□□ -0.64
RN7SL549P-201ENST00000478997 PRR36Q9H6K5 1346 aa11.03□□□□□ -0.64
RN7SL549P-201ENST00000478997 TNS3Q68CZ2 1445 aa11.02□□□□□ -0.64
RN7SL549P-201ENST00000478997 TOPAZ1Q8N9V7 1692 aa11.02□□□□□ -0.64
RN7SL549P-201ENST00000478997 CDK12Q9NYV4 1490 aaPredicted RBP11.02□□□□□ -0.65
RN7SL549P-201ENST00000478997 NBPF1Q3BBV0 1214 aa11.02□□□□□ -0.65
RN7SL549P-201ENST00000478997 TRPM3Q9HCF6 1732 aaPredicted RBP11.01□□□□□ -0.65
RN7SL549P-201ENST00000478997 KRT28Q7Z3Y7 464 aa11.01□□□□□ -0.65
RN7SL549P-201ENST00000478997 HIRIP3Q9BW71 556 aaPredicted RBP11.01□□□□□ -0.65
RN7SL549P-201ENST00000478997 AFF2P51816 1311 aa11.01□□□□□ -0.65
RN7SL549P-201ENST00000478997 XPCQ01831 940 aaPredicted RBP11□□□□□ -0.65
RN7SL549P-201ENST00000478997 PSME1Q06323 249 aa11□□□□□ -0.65
RN7SL549P-201ENST00000478997 ALS2Q96Q42 1657 aa11□□□□□ -0.65
RN7SL549P-201ENST00000478997 ABCA3Q99758 1704 aa11□□□□□ -0.65
RN7SL549P-201ENST00000478997 ARHGEF10O15013 1369 aa11□□□□□ -0.65
RN7SL549P-201ENST00000478997 GPRASP1Q5JY77 1395 aa11□□□□□ -0.65
RN7SL549P-201ENST00000478997 QRICH2Q9H0J4 1663 aa10.99□□□□□ -0.65
RN7SL549P-201ENST00000478997 FNBP4Q8N3X1 1017 aaPredicted RBP10.99□□□□□ -0.65
RN7SL549P-201ENST00000478997 C8orf37Q96NL8 207 aa10.99□□□□□ -0.65
RN7SL549P-201ENST00000478997 CENPJQ9HC77 1338 aaPredicted RBP10.99□□□□□ -0.65
RN7SL549P-201ENST00000478997 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.98□□□□□ -0.65
RN7SL549P-201ENST00000478997 ADAMTS2O95450 1211 aa10.98□□□□□ -0.65
RN7SL549P-201ENST00000478997 NEUROD1Q13562 356 aa10.98□□□□□ -0.65
RN7SL549P-201ENST00000478997 PMFBP1Q8TBY8 1022 aa10.97□□□□□ -0.65
RN7SL549P-201ENST00000478997 NUDT16Q96DE0 195 aaKnown RBP10.97□□□□□ -0.65
RN7SL549P-201ENST00000478997 NGLY1Q96IV0 654 aa10.97□□□□□ -0.65
RN7SL549P-201ENST00000478997 POLR3AO14802 1390 aaPredicted RBP10.97□□□□□ -0.65
RN7SL549P-201ENST00000478997 ROCK2O75116 1388 aaKnown RBP10.97□□□□□ -0.65
RN7SL549P-201ENST00000478997 RALGAPBQ86X10 1494 aa10.97□□□□□ -0.65
RN7SL549P-201ENST00000478997 CRYBG1Q9Y4K1 1723 aa10.96□□□□□ -0.65
RN7SL549P-201ENST00000478997 SLIT2O94813 1529 aa10.96□□□□□ -0.65
RN7SL549P-201ENST00000478997 ATRNO75882 1429 aa10.96□□□□□ -0.65
RN7SL549P-201ENST00000478997 RXRBP28702 533 aa10.96□□□□□ -0.65
RN7SL549P-201ENST00000478997 CDK19Q9BWU1 502 aa10.96□□□□□ -0.65
RN7SL549P-201ENST00000478997 BCL9LQ86UU0 1499 aa10.95□□□□□ -0.66
RN7SL549P-201ENST00000478997 TONSLQ96HA7 1378 aa10.95□□□□□ -0.66
RN7SL549P-201ENST00000478997 SBNO2Q9Y2G9 1366 aa10.95□□□□□ -0.66
RN7SL549P-201ENST00000478997 PLEKHG3A1L390 1219 aa10.95□□□□□ -0.66
RN7SL549P-201ENST00000478997 RBM6P78332 1123 aaKnown RBP10.95□□□□□ -0.66
RN7SL549P-201ENST00000478997 NBPF8Q3BBV2 869 aa10.95□□□□□ -0.66
RN7SL549P-201ENST00000478997 CCDC61Q9Y6R9 512 aa10.95□□□□□ -0.66
RN7SL549P-201ENST00000478997 NWD2Q9ULI1 1742 aa10.95□□□□□ -0.66
RN7SL549P-201ENST00000478997 NGDNQ8NEJ9 315 aaKnown RBP10.94□□□□□ -0.66
RN7SL549P-201ENST00000478997 QTRT2Q9H974 415 aaKnown RBP10.94□□□□□ -0.66
RN7SL549P-201ENST00000478997 USP21Q9UK80 565 aa10.94□□□□□ -0.66
RN7SL549P-201ENST00000478997 TRPC5Q9UL62 973 aaPredicted RBP10.94□□□□□ -0.66
RN7SL549P-201ENST00000478997 RGS12O14924 1447 aa10.93□□□□□ -0.66
RN7SL549P-201ENST00000478997 BRD4O60885 1362 aaPredicted RBP10.93□□□□□ -0.66
RN7SL549P-201ENST00000478997 PLCH1Q4KWH8 1693 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms