RNA–Protein interactions for RNA: ENST00000478887.1

SFI1-222, Transcript of SFI1 centrin binding protein, human

TSL 4

Gene SFI1, Length 662 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SFI1-222	ENST00000478887	RALGAPB	Q86X10	1494 aa		13.61	□□□□□ -0.23
SFI1-222	ENST00000478887	NBPF1	Q3BBV0	1214 aa		13.61	□□□□□ -0.23
SFI1-222	ENST00000478887	WAPL	Q7Z5K2	1190 aa		13.61	□□□□□ -0.23
SFI1-222	ENST00000478887	TIMELESS	Q9UNS1	1208 aa		13.61	□□□□□ -0.23
SFI1-222	ENST00000478887	ADGRB2	O60241	1585 aa		13.61	□□□□□ -0.23
SFI1-222	ENST00000478887	ATF3	P18847	181 aa		13.6	□□□□□ -0.23
SFI1-222	ENST00000478887	PRAM1	Q96QH2	718 aa		13.6	□□□□□ -0.23
SFI1-222	ENST00000478887	TRAK1	Q9UPV9	953 aa		13.6	□□□□□ -0.23
SFI1-222	ENST00000478887	ROCK2	O75116	1388 aa	Known RBP	13.59	□□□□□ -0.23
SFI1-222	ENST00000478887	PIP4K2B	P78356	416 aa		13.59	□□□□□ -0.23
SFI1-222	ENST00000478887	SLAIN2	Q9P270	581 aa		13.59	□□□□□ -0.23
SFI1-222	ENST00000478887	ROBO1	Q9Y6N7	1651 aa		13.59	□□□□□ -0.23
SFI1-222	ENST00000478887	SCAF1	Q9H7N4	1312 aa	Known RBP	13.58	□□□□□ -0.24
SFI1-222	ENST00000478887	C1orf167	Q5SNV9	1468 aa		13.56	□□□□□ -0.24
SFI1-222	ENST00000478887	POGK	Q9P215	609 aa		13.56	□□□□□ -0.24
SFI1-222	ENST00000478887	FMN2	Q9NZ56	1722 aa		13.56	□□□□□ -0.24
SFI1-222	ENST00000478887	AHDC1	Q5TGY3	1603 aa	Predicted RBP	13.54	□□□□□ -0.24
SFI1-222	ENST00000478887	SAFB2	Q14151	953 aa	Known RBP eCLIP	13.54	□□□□□ -0.24
SFI1-222	ENST00000478887	BRINP3	Q76B58	766 aa		13.53	□□□□□ -0.24
SFI1-222	ENST00000478887	CENPJ	Q9HC77	1338 aa	Predicted RBP	13.53	□□□□□ -0.24
SFI1-222	ENST00000478887	EIF3A	Q14152	1382 aa	Known RBP	13.53	□□□□□ -0.24
SFI1-222	ENST00000478887	HSPA1L	P34931	641 aa		13.52	□□□□□ -0.25
SFI1-222	ENST00000478887	ANKAR	Q7Z5J8	1434 aa		13.52	□□□□□ -0.25
SFI1-222	ENST00000478887	NHSL1	Q5SYE7	1610 aa		13.51	□□□□□ -0.25
SFI1-222	ENST00000478887	TULP4	Q9NRJ4	1543 aa		13.51	□□□□□ -0.25
SFI1-222	ENST00000478887	MINK1	Q8N4C8	1332 aa	Predicted RBP	13.51	□□□□□ -0.25
SFI1-222	ENST00000478887	CARD11	Q9BXL7	1154 aa		13.51	□□□□□ -0.25
SFI1-222	ENST00000478887	QRICH2	Q9H0J4	1663 aa		13.5	□□□□□ -0.25
SFI1-222	ENST00000478887	USP32	Q8NFA0	1604 aa		13.5	□□□□□ -0.25
SFI1-222	ENST00000478887	HIRIP3	Q9BW71	556 aa	Predicted RBP	13.5	□□□□□ -0.25
SFI1-222	ENST00000478887	COL16A1	Q07092	1604 aa	Predicted RBP	13.5	□□□□□ -0.25
SFI1-222	ENST00000478887	SBNO2	Q9Y2G9	1366 aa		13.49	□□□□□ -0.25
SFI1-222	ENST00000478887	WASL	O00401	505 aa	Predicted RBP	13.49	□□□□□ -0.25
SFI1-222	ENST00000478887	ATP7B	P35670	1465 aa		13.48	□□□□□ -0.25
SFI1-222	ENST00000478887	PHLPP1	O60346	1717 aa		13.48	□□□□□ -0.25
SFI1-222	ENST00000478887	KIF1A	Q12756	1690 aa		13.48	□□□□□ -0.25
SFI1-222	ENST00000478887	ORAI2	Q96SN7	254 aa		13.48	□□□□□ -0.25
SFI1-222	ENST00000478887	PRR36	Q9H6K5	1346 aa		13.46	□□□□□ -0.25
SFI1-222	ENST00000478887	NUTM2F	A1L443	756 aa		13.46	□□□□□ -0.25
SFI1-222	ENST00000478887	ADRA2B	P18089	450 aa		13.45	□□□□□ -0.26
SFI1-222	ENST00000478887	ESCO1	Q5FWF5	840 aa		13.45	□□□□□ -0.26
SFI1-222	ENST00000478887	TOPAZ1	Q8N9V7	1692 aa		13.44	□□□□□ -0.26
SFI1-222	ENST00000478887	PXDN	Q92626	1479 aa		13.44	□□□□□ -0.26
SFI1-222	ENST00000478887	USP47	Q96K76	1375 aa		13.44	□□□□□ -0.26
SFI1-222	ENST00000478887	SOS2	Q07890	1332 aa	Predicted RBP	13.43	□□□□□ -0.26
SFI1-222	ENST00000478887	NPHP3	Q7Z494	1330 aa		13.43	□□□□□ -0.26
SFI1-222	ENST00000478887	ITSN1	Q15811	1721 aa		13.43	□□□□□ -0.26
SFI1-222	ENST00000478887	CDK19	Q9BWU1	502 aa		13.43	□□□□□ -0.26
SFI1-222	ENST00000478887	JCAD	Q9P266	1359 aa		13.43	□□□□□ -0.26
SFI1-222	ENST00000478887	DDX17	Q92841	729 aa	Known RBP	13.42	□□□□□ -0.26
SFI1-222	ENST00000478887	PHF8	Q9UPP1	1060 aa		13.42	□□□□□ -0.26
SFI1-222	ENST00000478887	EVC2	Q86UK5	1308 aa		13.41	□□□□□ -0.26
SFI1-222	ENST00000478887	SHPRH	Q149N8	1683 aa		13.41	□□□□□ -0.26
SFI1-222	ENST00000478887	RGPD8	O14715	1765 aa	Predicted RBP	13.41	□□□□□ -0.26
SFI1-222	ENST00000478887	NUDT16	Q96DE0	195 aa	Known RBP	13.41	□□□□□ -0.26
SFI1-222	ENST00000478887	FOXO3	O43524	673 aa		13.4	□□□□□ -0.26
SFI1-222	ENST00000478887	TESK2	Q96S53	571 aa		13.4	□□□□□ -0.26
SFI1-222	ENST00000478887	ST20-MTHFS	A0A0A6YYL1	179 aa		13.39	□□□□□ -0.27
SFI1-222	ENST00000478887	SRPK2	P78362	688 aa	Known RBP	13.39	□□□□□ -0.27
SFI1-222	ENST00000478887	CCDC61	Q9Y6R9	512 aa		13.39	□□□□□ -0.27
SFI1-222	ENST00000478887	POLR3A	O14802	1390 aa	Predicted RBP	13.39	□□□□□ -0.27
SFI1-222	ENST00000478887	ATAD2	Q6PL18	1390 aa		13.38	□□□□□ -0.27
SFI1-222	ENST00000478887	PNPLA6	Q8IY17	1366 aa		13.38	□□□□□ -0.27
SFI1-222	ENST00000478887	LRRC59	Q96AG4	307 aa	Known RBP	13.38	□□□□□ -0.27
SFI1-222	ENST00000478887	CABP2	Q9NPB3	220 aa		13.38	□□□□□ -0.27
SFI1-222	ENST00000478887	PPIP5K1	Q6PFW1	1433 aa		13.38	□□□□□ -0.27
SFI1-222	ENST00000478887	MED1	Q15648	1581 aa	Predicted RBP	13.37	□□□□□ -0.27
SFI1-222	ENST00000478887	PLEKHG3	A1L390	1219 aa		13.37	□□□□□ -0.27
SFI1-222	ENST00000478887	SLC24A1	O60721	1099 aa		13.37	□□□□□ -0.27
SFI1-222	ENST00000478887	PIAS4	Q8N2W9	510 aa	Predicted RBP	13.37	□□□□□ -0.27
SFI1-222	ENST00000478887	PMFBP1	Q8TBY8	1022 aa		13.37	□□□□□ -0.27
SFI1-222	ENST00000478887	SPATA31A6	Q5VVP1	1343 aa		13.37	□□□□□ -0.27
SFI1-222	ENST00000478887	TRPM3	Q9HCF6	1732 aa	Predicted RBP	13.36	□□□□□ -0.27
SFI1-222	ENST00000478887	SBNO1	A3KN83	1393 aa		13.36	□□□□□ -0.27
SFI1-222	ENST00000478887	COL22A1	Q8NFW1	1626 aa	Predicted RBP	13.36	□□□□□ -0.27
SFI1-222	ENST00000478887	XPC	Q01831	940 aa	Predicted RBP	13.36	□□□□□ -0.27
SFI1-222	ENST00000478887	PUS7	Q96PZ0	661 aa	Known RBP	13.36	□□□□□ -0.27
SFI1-222	ENST00000478887	TNS3	Q68CZ2	1445 aa		13.36	□□□□□ -0.27
SFI1-222	ENST00000478887	KRT28	Q7Z3Y7	464 aa		13.35	□□□□□ -0.27
SFI1-222	ENST00000478887	SPATA31A3	Q5VYP0	1347 aa		13.35	□□□□□ -0.27
SFI1-222	ENST00000478887	LRP6	O75581	1613 aa		13.35	□□□□□ -0.27
SFI1-222	ENST00000478887	NGDN	Q8NEJ9	315 aa	Known RBP	13.34	□□□□□ -0.27
SFI1-222	ENST00000478887	ACE	P12821	1306 aa		13.34	□□□□□ -0.27
SFI1-222	ENST00000478887	DISP3	Q9P2K9	1392 aa		13.33	□□□□□ -0.27
SFI1-222	ENST00000478887	EIF4G2	P78344	907 aa	Known RBP eCLIP	13.33	□□□□□ -0.28
SFI1-222	ENST00000478887	PSME1	Q06323	249 aa		13.33	□□□□□ -0.28
SFI1-222	ENST00000478887	ALS2	Q96Q42	1657 aa		13.33	□□□□□ -0.28
SFI1-222	ENST00000478887	CABP1	Q9NZU7	370 aa		13.32	□□□□□ -0.28
SFI1-222	ENST00000478887	ARHGEF10	O15013	1369 aa		13.32	□□□□□ -0.28
SFI1-222	ENST00000478887	BRD4	O60885	1362 aa	Predicted RBP	13.32	□□□□□ -0.28
SFI1-222	ENST00000478887	NINL	Q9Y2I6	1382 aa		13.32	□□□□□ -0.28
SFI1-222	ENST00000478887	USP6	P35125	1406 aa		13.31	□□□□□ -0.28
SFI1-222	ENST00000478887	CPSF1	Q10570	1443 aa	Known RBP	13.31	□□□□□ -0.28
SFI1-222	ENST00000478887	TMF1	P82094	1093 aa		13.31	□□□□□ -0.28
SFI1-222	ENST00000478887	CD163L1	Q9NR16	1453 aa		13.3	□□□□□ -0.28
SFI1-222	ENST00000478887	HSPA5	P11021	654 aa	Known RBP	13.3	□□□□□ -0.28
SFI1-222	ENST00000478887	SSH2	Q76I76	1423 aa		13.3	□□□□□ -0.28
SFI1-222	ENST00000478887	NRK	Q7Z2Y5	1582 aa		13.29	□□□□□ -0.28
SFI1-222	ENST00000478887	AKAP12	Q02952	1782 aa		13.29	□□□□□ -0.28
SFI1-222	ENST00000478887	CDCA8	Q53HL2	280 aa		13.28	□□□□□ -0.28

Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms