RNA–Protein interactions for RNA: ENST00000478548.1

MEN1-215, Transcript of menin 1, humanhuman

TSL 2

Gene MEN1, Length 1,341 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MEN1-215ENST00000478548 TRAK1Q9UPV9 953 aa34.45■■■■□ 3.11
MEN1-215ENST00000478548 MED1Q15648 1581 aaPredicted RBP34.44■■■■□ 3.1
MEN1-215ENST00000478548 CDC42BPGQ6DT37 1551 aa34.44■■■■□ 3.1
MEN1-215ENST00000478548 PRAM1Q96QH2 718 aa34.43■■■■□ 3.1
MEN1-215ENST00000478548 BRINP3Q76B58 766 aa34.41■■■■□ 3.1
MEN1-215ENST00000478548 PHLPP1O60346 1717 aa34.4■■■■□ 3.1
MEN1-215ENST00000478548 TRPM1Q7Z4N2 1603 aa34.4■■■■□ 3.1
MEN1-215ENST00000478548 ARHGEF28Q8N1W1 1705 aaKnown RBP34.4■■■■□ 3.1
MEN1-215ENST00000478548 C1orf167Q5SNV9 1468 aa34.39■■■■□ 3.1
MEN1-215ENST00000478548 NBPF8Q3BBV2 869 aa34.38■■■■□ 3.09
MEN1-215ENST00000478548 TONSLQ96HA7 1378 aa34.37■■■■□ 3.09
MEN1-215ENST00000478548 AHDC1Q5TGY3 1603 aaPredicted RBP34.37■■■■□ 3.09
MEN1-215ENST00000478548 COL16A1Q07092 1604 aaPredicted RBP34.35■■■■□ 3.09
MEN1-215ENST00000478548 SAFB2Q14151 953 aaKnown RBP eCLIP34.34■■■■□ 3.09
MEN1-215ENST00000478548 CLSPNQ9HAW4 1339 aa34.33■■■■□ 3.09
MEN1-215ENST00000478548 POGKQ9P215 609 aa34.33■■■■□ 3.09
MEN1-215ENST00000478548 FMN2Q9NZ56 1722 aa34.32■■■■□ 3.09
MEN1-215ENST00000478548 ADGRB2O60241 1585 aa34.3■■■■□ 3.08
MEN1-215ENST00000478548 ORAI2Q96SN7 254 aa34.29■■■■□ 3.08
MEN1-215ENST00000478548 NHSL1Q5SYE7 1610 aa34.28■■■■□ 3.08
MEN1-215ENST00000478548 JCADQ9P266 1359 aa34.26■■■■□ 3.08
MEN1-215ENST00000478548 GPRASP1Q5JY77 1395 aa34.23■■■■□ 3.07
MEN1-215ENST00000478548 MINK1Q8N4C8 1332 aaPredicted RBP34.22■■■■□ 3.07
MEN1-215ENST00000478548 NUTM2FA1L443 756 aa34.22■■■■□ 3.07
MEN1-215ENST00000478548 DDX17Q92841 729 aaKnown RBP34.22■■■■□ 3.07
MEN1-215ENST00000478548 HIRIP3Q9BW71 556 aaPredicted RBP34.22■■■■□ 3.07
MEN1-215ENST00000478548 ROCK2O75116 1388 aaKnown RBP34.21■■■■□ 3.07
MEN1-215ENST00000478548 ILDR2Q71H61 639 aa34.21■■■■□ 3.07
MEN1-215ENST00000478548 RGPD8O14715 1765 aaPredicted RBP34.21■■■■□ 3.07
MEN1-215ENST00000478548 USP32Q8NFA0 1604 aa34.19■■■■□ 3.06
MEN1-215ENST00000478548 RALGAPBQ86X10 1494 aa34.18■■■■□ 3.06
MEN1-215ENST00000478548 ESCO1Q5FWF5 840 aa34.17■■■■□ 3.06
MEN1-215ENST00000478548 CCER1Q8TC90 406 aaPredicted RBP34.17■■■■□ 3.06
MEN1-215ENST00000478548 PHF23Q9BUL5 403 aaPredicted RBP34.17■■■■□ 3.06
MEN1-215ENST00000478548 WASLO00401 505 aaPredicted RBP34.15■■■■□ 3.06
MEN1-215ENST00000478548 TIMELESSQ9UNS1 1208 aa34.14■■■■□ 3.06
MEN1-215ENST00000478548 SHPRHQ149N8 1683 aa34.13■■■■□ 3.05
MEN1-215ENST00000478548 CENPJQ9HC77 1338 aaPredicted RBP34.12■■■■□ 3.05
MEN1-215ENST00000478548 ANKARQ7Z5J8 1434 aa34.12■■■■□ 3.05
MEN1-215ENST00000478548 SOS2Q07890 1332 aaPredicted RBP34.11■■■■□ 3.05
MEN1-215ENST00000478548 PRR36Q9H6K5 1346 aa34.11■■■■□ 3.05
MEN1-215ENST00000478548 QRICH2Q9H0J4 1663 aa34.1■■■■□ 3.05
MEN1-215ENST00000478548 TULP4Q9NRJ4 1543 aa34.1■■■■□ 3.05
MEN1-215ENST00000478548 SPATA31A6Q5VVP1 1343 aa34.08■■■■□ 3.05
MEN1-215ENST00000478548 LRP6O75581 1613 aa34.08■■■■□ 3.05
MEN1-215ENST00000478548 KIF1AQ12756 1690 aa34.07■■■■□ 3.05
MEN1-215ENST00000478548 LRRC59Q96AG4 307 aaKnown RBP34.07■■■■□ 3.05
MEN1-215ENST00000478548 FOXO3O43524 673 aa34.06■■■■□ 3.04
MEN1-215ENST00000478548 PXDNQ92626 1479 aa34.06■■■■□ 3.04
MEN1-215ENST00000478548 CARD11Q9BXL7 1154 aa34.05■■■■□ 3.04
MEN1-215ENST00000478548 CDK19Q9BWU1 502 aa34.04■■■■□ 3.04
MEN1-215ENST00000478548 PHF8Q9UPP1 1060 aa34.04■■■■□ 3.04
MEN1-215ENST00000478548 EIF3AQ14152 1382 aaKnown RBP34.04■■■■□ 3.04
MEN1-215ENST00000478548 NPHP3Q7Z494 1330 aa34.03■■■■□ 3.04
MEN1-215ENST00000478548 ATP7BP35670 1465 aa34.03■■■■□ 3.04
MEN1-215ENST00000478548 RGS17Q9UGC6 210 aaPredicted RBP34.03■■■■□ 3.04
MEN1-215ENST00000478548 PNPLA6Q8IY17 1366 aa34.02■■■■□ 3.04
MEN1-215ENST00000478548 NUDT16Q96DE0 195 aaKnown RBP33.99■■■■□ 3.03
MEN1-215ENST00000478548 XPCQ01831 940 aaPredicted RBP33.98■■■■□ 3.03
MEN1-215ENST00000478548 PMFBP1Q8TBY8 1022 aa33.97■■■■□ 3.03
MEN1-215ENST00000478548 NUTM2BA6NNL0 878 aaPredicted RBP33.96■■■■□ 3.03
MEN1-215ENST00000478548 NUTM2EB1AL46 878 aaPredicted RBP33.96■■■■□ 3.03
MEN1-215ENST00000478548 NUTM2AQ8IVF1 878 aaPredicted RBP33.96■■■■□ 3.03
MEN1-215ENST00000478548 TOPAZ1Q8N9V7 1692 aa33.96■■■■□ 3.03
MEN1-215ENST00000478548 ITSN1Q15811 1721 aa33.94■■■■□ 3.02
MEN1-215ENST00000478548 MEX3CQ5U5Q3 659 aaKnown RBP33.94■■■■□ 3.02
MEN1-215ENST00000478548 SBNO2Q9Y2G9 1366 aa33.92■■■■□ 3.02
MEN1-215ENST00000478548 KRT28Q7Z3Y7 464 aa33.92■■■■□ 3.02
MEN1-215ENST00000478548 CABP2Q9NPB3 220 aa33.9■■■■□ 3.02
MEN1-215ENST00000478548 CCDC61Q9Y6R9 512 aa33.89■■■■□ 3.02
MEN1-215ENST00000478548 COL22A1Q8NFW1 1626 aaPredicted RBP33.88■■■■□ 3.01
MEN1-215ENST00000478548 SRPK2P78362 688 aaKnown RBP33.87■■■■□ 3.01
MEN1-215ENST00000478548 SPATA31A3Q5VYP0 1347 aa33.87■■■■□ 3.01
MEN1-215ENST00000478548 EVC2Q86UK5 1308 aa33.87■■■■□ 3.01
MEN1-215ENST00000478548 TRPM3Q9HCF6 1732 aaPredicted RBP33.86■■■■□ 3.01
MEN1-215ENST00000478548 PLEKHG3A1L390 1219 aa33.85■■■■□ 3.01
MEN1-215ENST00000478548 PSME1Q06323 249 aa33.85■■■■□ 3.01
MEN1-215ENST00000478548 POTEAQ6S8J7 498 aa33.85■■■■□ 3.01
MEN1-215ENST00000478548 SBNO1A3KN83 1393 aa33.84■■■■□ 3.01
MEN1-215ENST00000478548 POLR3AO14802 1390 aaPredicted RBP33.83■■■■□ 3.01
MEN1-215ENST00000478548 ST20-MTHFSA0A0A6YYL1 179 aa33.82■■■■□ 3.01
MEN1-215ENST00000478548 SOCS7O14512 581 aa33.81■■■■□ 3
MEN1-215ENST00000478548 TESK2Q96S53 571 aa33.81■■■■□ 3
MEN1-215ENST00000478548 TNS3Q68CZ2 1445 aa33.8■■■■□ 3
MEN1-215ENST00000478548 PPIP5K1Q6PFW1 1433 aa33.8■■■■□ 3
MEN1-215ENST00000478548 NGDNQ8NEJ9 315 aaKnown RBP33.79■■■■□ 3
MEN1-215ENST00000478548 USP47Q96K76 1375 aa33.78■■■■□ 3
MEN1-215ENST00000478548 ACEP12821 1306 aa33.78■■■■□ 3
MEN1-215ENST00000478548 ADAMTS2O95450 1211 aa33.78■■■■□ 3
MEN1-215ENST00000478548 ALS2Q96Q42 1657 aa33.76■■■□□ 2.99
MEN1-215ENST00000478548 C8orf37Q96NL8 207 aa33.76■■■□□ 2.99
MEN1-215ENST00000478548 CABP1Q9NZU7 370 aa33.75■■■□□ 2.99
MEN1-215ENST00000478548 AFF2P51816 1311 aa33.73■■■□□ 2.99
MEN1-215ENST00000478548 ZNF772Q68DY9 489 aaPredicted RBP33.73■■■□□ 2.99
MEN1-215ENST00000478548 ATAD2Q6PL18 1390 aa33.69■■■□□ 2.98
MEN1-215ENST00000478548 ARHGEF10O15013 1369 aa33.68■■■□□ 2.98
MEN1-215ENST00000478548 PUS7Q96PZ0 661 aaKnown RBP33.67■■■□□ 2.98
MEN1-215ENST00000478548 LMOD2Q6P5Q4 547 aa33.65■■■□□ 2.98
MEN1-215ENST00000478548 NGLY1Q96IV0 654 aa33.65■■■□□ 2.98
MEN1-215ENST00000478548 ABCA3Q99758 1704 aa33.65■■■□□ 2.98
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms