RNA–Protein interactions for RNA: ENST00000478454.5

CCNL1-220, Transcript of cyclin L1, humanhuman

TSL 4

Gene CCNL1, Length 580 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-220ENST00000478454 NR1I2O75469 434 aa8.7□□□□□ -1.02
CCNL1-220ENST00000478454 GJA5P36382 358 aa8.7□□□□□ -1.02
CCNL1-220ENST00000478454 CSPP1Q1MSJ5 1256 aa8.7□□□□□ -1.02
CCNL1-220ENST00000478454 TMEM132AQ24JP5 1023 aa8.7□□□□□ -1.02
CCNL1-220ENST00000478454 BRICD5Q6PL45 260 aa8.7□□□□□ -1.02
CCNL1-220ENST00000478454 CABLES1Q8TDN4 633 aa8.7□□□□□ -1.02
CCNL1-220ENST00000478454 IL21Q9HBE4 155 aa8.7□□□□□ -1.02
CCNL1-220ENST00000478454 HRCP23327 699 aa8.68□□□□□ -1.02
CCNL1-220ENST00000478454 TUSC1Q2TAM9 212 aa8.68□□□□□ -1.02
CCNL1-220ENST00000478454 LILRB3O75022 631 aa8.67□□□□□ -1.02
CCNL1-220ENST00000478454 RTL5Q5HYW3 569 aaPredicted RBP8.67□□□□□ -1.02
CCNL1-220ENST00000478454 FAM160A2Q8N612 972 aaPredicted RBP8.67□□□□□ -1.02
CCNL1-220ENST00000478454 SALL2Q9Y467 1007 aaPredicted RBP8.67□□□□□ -1.02
CCNL1-220ENST00000478454 KCNC4Q03721 635 aa8.66□□□□□ -1.02
CCNL1-220ENST00000478454 SPSB2Q99619 263 aa8.66□□□□□ -1.02
CCNL1-220ENST00000478454 C6orf229H3BNL8 230 aa8.65□□□□□ -1.02
CCNL1-220ENST00000478454 FMNL1O95466 1100 aaPredicted RBP8.65□□□□□ -1.02
CCNL1-220ENST00000478454 Q3C1V9 767 aa8.65□□□□□ -1.02
CCNL1-220ENST00000478454 PCMTD1Q96MG8 357 aaPredicted RBP8.65□□□□□ -1.02
CCNL1-220ENST00000478454 CFAP99D6REC4 459 aa8.64□□□□□ -1.03
CCNL1-220ENST00000478454 MTMR2Q13614 643 aa8.64□□□□□ -1.03
CCNL1-220ENST00000478454 PRPF38BQ5VTL8 546 aaKnown RBP8.64□□□□□ -1.03
CCNL1-220ENST00000478454 PRDM9Q9NQV7 894 aa8.64□□□□□ -1.03
CCNL1-220ENST00000478454 USB1Q9BQ65 265 aaKnown RBP8.63□□□□□ -1.03
CCNL1-220ENST00000478454 ZBTB3Q9H5J0 574 aa8.63□□□□□ -1.03
CCNL1-220ENST00000478454 PLA2G2EQ9NZK7 142 aa8.63□□□□□ -1.03
CCNL1-220ENST00000478454 ADH1BP00325 375 aa8.62□□□□□ -1.03
CCNL1-220ENST00000478454 PPP2R2DQ66LE6 453 aa8.62□□□□□ -1.03
CCNL1-220ENST00000478454 RETREG3Q86VR2 466 aa8.62□□□□□ -1.03
CCNL1-220ENST00000478454 ATP1B4Q9UN42 357 aaPredicted RBP8.62□□□□□ -1.03
CCNL1-220ENST00000478454 NUTM2BA6NNL0 878 aaPredicted RBP8.61□□□□□ -1.03
CCNL1-220ENST00000478454 NUTM2EB1AL46 878 aaPredicted RBP8.61□□□□□ -1.03
CCNL1-220ENST00000478454 NUTM2DQ5VT03 806 aaPredicted RBP8.61□□□□□ -1.03
CCNL1-220ENST00000478454 NUTM2AQ8IVF1 878 aaPredicted RBP8.61□□□□□ -1.03
CCNL1-220ENST00000478454 PRR7Q8TB68 274 aa8.61□□□□□ -1.03
CCNL1-220ENST00000478454 S1PR4O95977 384 aa8.6□□□□□ -1.03
CCNL1-220ENST00000478454 IFFO2Q5TF58 517 aa8.6□□□□□ -1.03
CCNL1-220ENST00000478454 SPDYE5A6NIY4 337 aa8.59□□□□□ -1.03
CCNL1-220ENST00000478454 RFC5P40937 340 aa8.59□□□□□ -1.03
CCNL1-220ENST00000478454 MSS51Q4VC12 460 aa8.59□□□□□ -1.03
CCNL1-220ENST00000478454 SLC6A16Q9GZN6 736 aa8.59□□□□□ -1.03
CCNL1-220ENST00000478454 PPEF1O14829 653 aaPredicted RBP8.58□□□□□ -1.04
CCNL1-220ENST00000478454 PPP1R18Q6NYC8 613 aa8.58□□□□□ -1.04
CCNL1-220ENST00000478454 PER1O15534 1290 aaPredicted RBP8.57□□□□□ -1.04
CCNL1-220ENST00000478454 MMP16P51512 607 aa8.57□□□□□ -1.04
CCNL1-220ENST00000478454 CTDSPL2Q05D32 466 aa8.57□□□□□ -1.04
CCNL1-220ENST00000478454 DXOO77932 396 aaKnown RBP8.56□□□□□ -1.04
CCNL1-220ENST00000478454 RNF223E7ERA6 249 aa8.55□□□□□ -1.04
CCNL1-220ENST00000478454 JUNDP17535 347 aa8.55□□□□□ -1.04
CCNL1-220ENST00000478454 TSC1Q92574 1164 aa8.55□□□□□ -1.04
CCNL1-220ENST00000478454 DESI1Q6ICB0 168 aa8.54□□□□□ -1.04
CCNL1-220ENST00000478454 AP1G2O75843 785 aa8.53□□□□□ -1.04
CCNL1-220ENST00000478454 PLA2G2CQ5R387 149 aa8.53□□□□□ -1.04
CCNL1-220ENST00000478454 LYPD8Q6UX82 237 aa8.53□□□□□ -1.04
CCNL1-220ENST00000478454 A0A0G2JS52 829 aa8.52□□□□□ -1.05
CCNL1-220ENST00000478454 LRRN4Q8WUT4 740 aa8.52□□□□□ -1.05
CCNL1-220ENST00000478454 EMID1Q96A84 441 aaPredicted RBP8.52□□□□□ -1.05
CCNL1-220ENST00000478454 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.52□□□□□ -1.05
CCNL1-220ENST00000478454 FCF1Q9Y324 198 aaKnown RBP8.52□□□□□ -1.05
CCNL1-220ENST00000478454 PTPRNQ16849 979 aa8.5□□□□□ -1.05
CCNL1-220ENST00000478454 TMEM259Q4ZIN3 620 aa8.5□□□□□ -1.05
CCNL1-220ENST00000478454 HELBQ8NG08 1087 aaPredicted RBP8.5□□□□□ -1.05
CCNL1-220ENST00000478454 HMX1Q9NP08 348 aaPredicted RBP8.5□□□□□ -1.05
CCNL1-220ENST00000478454 SNRKQ9NRH2 765 aa8.5□□□□□ -1.05
CCNL1-220ENST00000478454 USP17L8P0C7I0 530 aa8.49□□□□□ -1.05
CCNL1-220ENST00000478454 PTCRAQ6ISU1 281 aaPredicted RBP8.49□□□□□ -1.05
CCNL1-220ENST00000478454 ANKLE1Q8NAG6 615 aa8.49□□□□□ -1.05
CCNL1-220ENST00000478454 EPS8L1Q8TE68 723 aa8.49□□□□□ -1.05
CCNL1-220ENST00000478454 NUDT12Q9BQG2 462 aa8.49□□□□□ -1.05
CCNL1-220ENST00000478454 F12P00748 615 aaPredicted RBP8.48□□□□□ -1.05
CCNL1-220ENST00000478454 MAP10Q9P2G4 905 aa8.48□□□□□ -1.05
CCNL1-220ENST00000478454 CCNYL3P0C7X3 344 aa8.47□□□□□ -1.05
CCNL1-220ENST00000478454 GGCXP38435 758 aa8.47□□□□□ -1.05
CCNL1-220ENST00000478454 CCDC24Q8N4L8 307 aa8.47□□□□□ -1.05
CCNL1-220ENST00000478454 MTMR14Q8NCE2 650 aa8.47□□□□□ -1.05
CCNL1-220ENST00000478454 EVA1BQ9NVM1 165 aa8.47□□□□□ -1.05
CCNL1-220ENST00000478454 LIAT1Q6ZQX7 453 aa8.46□□□□□ -1.06
CCNL1-220ENST00000478454 BANK1Q8NDB2 785 aa8.46□□□□□ -1.06
CCNL1-220ENST00000478454 NR6A1Q15406 480 aa8.45□□□□□ -1.06
CCNL1-220ENST00000478454 GJD4Q96KN9 370 aaPredicted RBP8.45□□□□□ -1.06
CCNL1-220ENST00000478454 TRIM34Q9BYJ4 488 aa8.45□□□□□ -1.06
CCNL1-220ENST00000478454 KCNH2Q12809 1159 aa8.44□□□□□ -1.06
CCNL1-220ENST00000478454 GTF3C3Q9Y5Q9 886 aa8.44□□□□□ -1.06
CCNL1-220ENST00000478454 CTHP32929 405 aa8.43□□□□□ -1.06
CCNL1-220ENST00000478454 MCM6Q14566 821 aa8.43□□□□□ -1.06
CCNL1-220ENST00000478454 GPR37L1O60883 481 aa8.41□□□□□ -1.06
CCNL1-220ENST00000478454 UNC93B1Q9H1C4 597 aa8.41□□□□□ -1.06
CCNL1-220ENST00000478454 PRKD2Q9BZL6 878 aa8.4□□□□□ -1.06
CCNL1-220ENST00000478454 SLC19A1P41440 591 aa8.39□□□□□ -1.07
CCNL1-220ENST00000478454 SOCS7O14512 581 aa8.38□□□□□ -1.07
CCNL1-220ENST00000478454 TRIM32Q13049 653 aa8.38□□□□□ -1.07
CCNL1-220ENST00000478454 BAP1Q92560 729 aa8.38□□□□□ -1.07
CCNL1-220ENST00000478454 RPIAP49247 311 aa8.37□□□□□ -1.07
CCNL1-220ENST00000478454 SKOR1P84550 965 aa8.37□□□□□ -1.07
CCNL1-220ENST00000478454 LINC01559Q495D7 138 aa8.37□□□□□ -1.07
CCNL1-220ENST00000478454 SPRYD7Q5W111 196 aa8.37□□□□□ -1.07
CCNL1-220ENST00000478454 POM121Q96HA1 1249 aa8.37□□□□□ -1.07
CCNL1-220ENST00000478454 TBC1D2BQ9UPU7 963 aa8.36□□□□□ -1.07
CCNL1-220ENST00000478454 ZBTB24O43167 697 aaPredicted RBP8.35□□□□□ -1.07
CCNL1-220ENST00000478454 SH3BP2P78314 561 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 101 ms