RNA–Protein interactions for RNA: ENST00000478214.1

HMGA1-206, Transcript of high mobility group AT-hook 1, humanhuman

TSL 1 (best)

Gene HMGA1, Length 716 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-206ENST00000478214 SAFB2Q14151 953 aaKnown RBP eCLIP22.51■■□□□ 1.19
HMGA1-206ENST00000478214 DISP3Q9P2K9 1392 aa22.5■■□□□ 1.19
HMGA1-206ENST00000478214 DLC1Q96QB1 1528 aa22.49■■□□□ 1.19
HMGA1-206ENST00000478214 POGKQ9P215 609 aa22.49■■□□□ 1.19
HMGA1-206ENST00000478214 CDC42BPGQ6DT37 1551 aa22.48■■□□□ 1.19
HMGA1-206ENST00000478214 ORAI2Q96SN7 254 aa22.48■■□□□ 1.19
HMGA1-206ENST00000478214 NUTM2FA1L443 756 aa22.47■■□□□ 1.19
HMGA1-206ENST00000478214 NBPF1Q3BBV0 1214 aa22.47■■□□□ 1.19
HMGA1-206ENST00000478214 PHLPP1O60346 1717 aa22.47■■□□□ 1.19
HMGA1-206ENST00000478214 AHDC1Q5TGY3 1603 aaPredicted RBP22.46■■□□□ 1.19
HMGA1-206ENST00000478214 DDX17Q92841 729 aaKnown RBP22.46■■□□□ 1.19
HMGA1-206ENST00000478214 COL16A1Q07092 1604 aaPredicted RBP22.44■■□□□ 1.18
HMGA1-206ENST00000478214 MED1Q15648 1581 aaPredicted RBP22.43■■□□□ 1.18
HMGA1-206ENST00000478214 JCADQ9P266 1359 aa22.42■■□□□ 1.18
HMGA1-206ENST00000478214 ESCO1Q5FWF5 840 aa22.42■■□□□ 1.18
HMGA1-206ENST00000478214 KIAA1210Q9ULL0 1709 aa22.41■■□□□ 1.18
HMGA1-206ENST00000478214 HIRIP3Q9BW71 556 aaPredicted RBP22.41■■□□□ 1.18
HMGA1-206ENST00000478214 MINK1Q8N4C8 1332 aaPredicted RBP22.4■■□□□ 1.18
HMGA1-206ENST00000478214 NHSL1Q5SYE7 1610 aa22.39■■□□□ 1.17
HMGA1-206ENST00000478214 TONSLQ96HA7 1378 aa22.38■■□□□ 1.17
HMGA1-206ENST00000478214 NBPF8Q3BBV2 869 aa22.37■■□□□ 1.17
HMGA1-206ENST00000478214 FMN2Q9NZ56 1722 aa22.37■■□□□ 1.17
HMGA1-206ENST00000478214 ARHGEF28Q8N1W1 1705 aaKnown RBP22.35■■□□□ 1.17
HMGA1-206ENST00000478214 LRRC59Q96AG4 307 aaKnown RBP22.35■■□□□ 1.17
HMGA1-206ENST00000478214 SOS2Q07890 1332 aaPredicted RBP22.34■■□□□ 1.17
HMGA1-206ENST00000478214 FOXO3O43524 673 aa22.34■■□□□ 1.17
HMGA1-206ENST00000478214 ADGRB2O60241 1585 aa22.33■■□□□ 1.17
HMGA1-206ENST00000478214 WASLO00401 505 aaPredicted RBP22.32■■□□□ 1.16
HMGA1-206ENST00000478214 PHF23Q9BUL5 403 aaPredicted RBP22.32■■□□□ 1.16
HMGA1-206ENST00000478214 NPHP3Q7Z494 1330 aa22.31■■□□□ 1.16
HMGA1-206ENST00000478214 TRPM1Q7Z4N2 1603 aa22.31■■□□□ 1.16
HMGA1-206ENST00000478214 ROCK2O75116 1388 aaKnown RBP22.31■■□□□ 1.16
HMGA1-206ENST00000478214 XPCQ01831 940 aaPredicted RBP22.31■■□□□ 1.16
HMGA1-206ENST00000478214 SPATA31A6Q5VVP1 1343 aa22.31■■□□□ 1.16
HMGA1-206ENST00000478214 PHF8Q9UPP1 1060 aa22.3■■□□□ 1.16
HMGA1-206ENST00000478214 ANKARQ7Z5J8 1434 aa22.3■■□□□ 1.16
HMGA1-206ENST00000478214 PRR36Q9H6K5 1346 aa22.29■■□□□ 1.16
HMGA1-206ENST00000478214 CENPJQ9HC77 1338 aaPredicted RBP22.29■■□□□ 1.16
HMGA1-206ENST00000478214 PNPLA6Q8IY17 1366 aa22.28■■□□□ 1.16
HMGA1-206ENST00000478214 SHPRHQ149N8 1683 aa22.28■■□□□ 1.16
HMGA1-206ENST00000478214 ILDR2Q71H61 639 aa22.28■■□□□ 1.16
HMGA1-206ENST00000478214 LRP6O75581 1613 aa22.27■■□□□ 1.16
HMGA1-206ENST00000478214 PXDNQ92626 1479 aa22.27■■□□□ 1.16
HMGA1-206ENST00000478214 EIF3AQ14152 1382 aaKnown RBP22.26■■□□□ 1.15
HMGA1-206ENST00000478214 NUTM2BA6NNL0 878 aaPredicted RBP22.26■■□□□ 1.15
HMGA1-206ENST00000478214 NUTM2EB1AL46 878 aaPredicted RBP22.26■■□□□ 1.15
HMGA1-206ENST00000478214 NUTM2AQ8IVF1 878 aaPredicted RBP22.26■■□□□ 1.15
HMGA1-206ENST00000478214 PMFBP1Q8TBY8 1022 aa22.26■■□□□ 1.15
HMGA1-206ENST00000478214 CDK19Q9BWU1 502 aa22.26■■□□□ 1.15
HMGA1-206ENST00000478214 USP32Q8NFA0 1604 aa22.26■■□□□ 1.15
HMGA1-206ENST00000478214 TULP4Q9NRJ4 1543 aa22.26■■□□□ 1.15
HMGA1-206ENST00000478214 RGPD8O14715 1765 aaPredicted RBP22.25■■□□□ 1.15
HMGA1-206ENST00000478214 GPRASP1Q5JY77 1395 aa22.25■■□□□ 1.15
HMGA1-206ENST00000478214 KIF1AQ12756 1690 aa22.24■■□□□ 1.15
HMGA1-206ENST00000478214 KRT28Q7Z3Y7 464 aa22.24■■□□□ 1.15
HMGA1-206ENST00000478214 RGS17Q9UGC6 210 aaPredicted RBP22.24■■□□□ 1.15
HMGA1-206ENST00000478214 CLSPNQ9HAW4 1339 aa22.24■■□□□ 1.15
HMGA1-206ENST00000478214 MEX3CQ5U5Q3 659 aaKnown RBP22.22■■□□□ 1.15
HMGA1-206ENST00000478214 NUDT16Q96DE0 195 aaKnown RBP22.22■■□□□ 1.15
HMGA1-206ENST00000478214 CARD11Q9BXL7 1154 aa22.22■■□□□ 1.15
HMGA1-206ENST00000478214 RALGAPBQ86X10 1494 aa22.22■■□□□ 1.15
HMGA1-206ENST00000478214 PSME1Q06323 249 aa22.2■■□□□ 1.14
HMGA1-206ENST00000478214 CCER1Q8TC90 406 aaPredicted RBP22.2■■□□□ 1.14
HMGA1-206ENST00000478214 ATP7BP35670 1465 aa22.2■■□□□ 1.14
HMGA1-206ENST00000478214 SPATA31A3Q5VYP0 1347 aa22.18■■□□□ 1.14
HMGA1-206ENST00000478214 SRPK2P78362 688 aaKnown RBP22.17■■□□□ 1.14
HMGA1-206ENST00000478214 QRICH2Q9H0J4 1663 aa22.17■■□□□ 1.14
HMGA1-206ENST00000478214 NGDNQ8NEJ9 315 aaKnown RBP22.16■■□□□ 1.14
HMGA1-206ENST00000478214 CABP2Q9NPB3 220 aa22.16■■□□□ 1.14
HMGA1-206ENST00000478214 CCDC61Q9Y6R9 512 aa22.15■■□□□ 1.14
HMGA1-206ENST00000478214 ADAMTS2O95450 1211 aa22.14■■□□□ 1.13
HMGA1-206ENST00000478214 POTEAQ6S8J7 498 aa22.14■■□□□ 1.13
HMGA1-206ENST00000478214 TIMELESSQ9UNS1 1208 aa22.14■■□□□ 1.13
HMGA1-206ENST00000478214 TNS3Q68CZ2 1445 aa22.14■■□□□ 1.13
HMGA1-206ENST00000478214 SBNO1A3KN83 1393 aa22.13■■□□□ 1.13
HMGA1-206ENST00000478214 EVC2Q86UK5 1308 aa22.12■■□□□ 1.13
HMGA1-206ENST00000478214 LMOD2Q6P5Q4 547 aa22.12■■□□□ 1.13
HMGA1-206ENST00000478214 C8orf37Q96NL8 207 aa22.12■■□□□ 1.13
HMGA1-206ENST00000478214 COL22A1Q8NFW1 1626 aaPredicted RBP22.12■■□□□ 1.13
HMGA1-206ENST00000478214 PLEKHG3A1L390 1219 aa22.1■■□□□ 1.13
HMGA1-206ENST00000478214 ACEP12821 1306 aa22.09■■□□□ 1.13
HMGA1-206ENST00000478214 ITSN1Q15811 1721 aa22.09■■□□□ 1.13
HMGA1-206ENST00000478214 AFF2P51816 1311 aa22.08■■□□□ 1.13
HMGA1-206ENST00000478214 PLEKHG5O94827 1062 aa22.08■■□□□ 1.13
HMGA1-206ENST00000478214 POLR3AO14802 1390 aaPredicted RBP22.08■■□□□ 1.12
HMGA1-206ENST00000478214 ARHGEF10O15013 1369 aa22.08■■□□□ 1.12
HMGA1-206ENST00000478214 TOPAZ1Q8N9V7 1692 aa22.07■■□□□ 1.12
HMGA1-206ENST00000478214 PPIP5K1Q6PFW1 1433 aa22.07■■□□□ 1.12
HMGA1-206ENST00000478214 ZNF772Q68DY9 489 aaPredicted RBP22.07■■□□□ 1.12
HMGA1-206ENST00000478214 CABLES1Q8TDN4 633 aa22.07■■□□□ 1.12
HMGA1-206ENST00000478214 NGLY1Q96IV0 654 aa22.07■■□□□ 1.12
HMGA1-206ENST00000478214 SBNO2Q9Y2G9 1366 aa22.07■■□□□ 1.12
HMGA1-206ENST00000478214 PAK3O75914 559 aaPredicted RBP22.06■■□□□ 1.12
HMGA1-206ENST00000478214 CABP1Q9NZU7 370 aa22.06■■□□□ 1.12
HMGA1-206ENST00000478214 TRPM3Q9HCF6 1732 aaPredicted RBP22.05■■□□□ 1.12
HMGA1-206ENST00000478214 ST20-MTHFSA0A0A6YYL1 179 aa22.03■■□□□ 1.12
HMGA1-206ENST00000478214 HAP1P54257 671 aaPredicted RBP22.02■■□□□ 1.12
HMGA1-206ENST00000478214 SOCS7O14512 581 aa22■■□□□ 1.11
HMGA1-206ENST00000478214 FNBP4Q8N3X1 1017 aaPredicted RBP22■■□□□ 1.11
HMGA1-206ENST00000478214 TESK2Q96S53 571 aa22■■□□□ 1.11
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