RNA–Protein interactions for RNA: ENST00000478004.1

PSMF1-208, Transcript of proteasome inhibitor subunit 1, humanhuman

TSL 2

Gene PSMF1, Length 632 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMF1-208ENST00000478004 DCCP43146 1447 aa16.81■□□□□ 0.28
PSMF1-208ENST00000478004 PTPRUQ92729 1446 aa16.8■□□□□ 0.28
PSMF1-208ENST00000478004 USP47Q96K76 1375 aa16.8■□□□□ 0.28
PSMF1-208ENST00000478004 HSPA5P11021 654 aaKnown RBP16.8■□□□□ 0.28
PSMF1-208ENST00000478004 COL16A1Q07092 1604 aaPredicted RBP16.79■□□□□ 0.28
PSMF1-208ENST00000478004 XRN1Q8IZH2 1706 aaKnown RBP16.79■□□□□ 0.28
PSMF1-208ENST00000478004 AHDC1Q5TGY3 1603 aaPredicted RBP16.78■□□□□ 0.28
PSMF1-208ENST00000478004 AMOTL2Q9Y2J4 779 aa16.78■□□□□ 0.28
PSMF1-208ENST00000478004 KNDC1Q76NI1 1749 aa16.77■□□□□ 0.28
PSMF1-208ENST00000478004 QRICH2Q9H0J4 1663 aa16.77■□□□□ 0.28
PSMF1-208ENST00000478004 SPATA31A6Q5VVP1 1343 aa16.76■□□□□ 0.27
PSMF1-208ENST00000478004 SHPRHQ149N8 1683 aa16.75■□□□□ 0.27
PSMF1-208ENST00000478004 STK26Q9P289 416 aa16.75■□□□□ 0.27
PSMF1-208ENST00000478004 RGS17Q9UGC6 210 aaPredicted RBP16.75■□□□□ 0.27
PSMF1-208ENST00000478004 YTHDC2Q9H6S0 1430 aaKnown RBP16.75■□□□□ 0.27
PSMF1-208ENST00000478004 EIF4G2P78344 907 aaKnown RBP eCLIP16.74■□□□□ 0.27
PSMF1-208ENST00000478004 PLEKHH1Q9ULM0 1364 aa16.74■□□□□ 0.27
PSMF1-208ENST00000478004 TRAK1Q9UPV9 953 aa16.73■□□□□ 0.27
PSMF1-208ENST00000478004 C11orf95C9JLR9 678 aaPredicted RBP16.72■□□□□ 0.27
PSMF1-208ENST00000478004 LRPPRCP42704 1394 aaKnown RBP16.72■□□□□ 0.27
PSMF1-208ENST00000478004 ST20-MTHFSA0A0A6YYL1 179 aa16.71■□□□□ 0.27
PSMF1-208ENST00000478004 EIF3AQ14152 1382 aaKnown RBP16.71■□□□□ 0.27
PSMF1-208ENST00000478004 MEX3CQ5U5Q3 659 aaKnown RBP16.7■□□□□ 0.26
PSMF1-208ENST00000478004 ROBO2Q9HCK4 1378 aa16.69■□□□□ 0.26
PSMF1-208ENST00000478004 ADGRL3Q9HAR2 1447 aa16.69■□□□□ 0.26
PSMF1-208ENST00000478004 ABCC11Q96J66 1382 aa16.68■□□□□ 0.26
PSMF1-208ENST00000478004 NHSL1Q5SYE7 1610 aa16.68■□□□□ 0.26
PSMF1-208ENST00000478004 ZNF772Q68DY9 489 aaPredicted RBP16.68■□□□□ 0.26
PSMF1-208ENST00000478004 POTEAQ6S8J7 498 aa16.68■□□□□ 0.26
PSMF1-208ENST00000478004 DLC1Q96QB1 1528 aa16.68■□□□□ 0.26
PSMF1-208ENST00000478004 TULP4Q9NRJ4 1543 aa16.67■□□□□ 0.26
PSMF1-208ENST00000478004 SAFB2Q14151 953 aaKnown RBP eCLIP16.67■□□□□ 0.26
PSMF1-208ENST00000478004 BRINP3Q76B58 766 aa16.67■□□□□ 0.26
PSMF1-208ENST00000478004 WAPLQ7Z5K2 1190 aa16.67■□□□□ 0.26
PSMF1-208ENST00000478004 TESK2Q96S53 571 aa16.67■□□□□ 0.26
PSMF1-208ENST00000478004 TECPR2O15040 1411 aa16.67■□□□□ 0.26
PSMF1-208ENST00000478004 MST1RQ04912 1400 aa16.66■□□□□ 0.26
PSMF1-208ENST00000478004 PTCH1Q13635 1447 aa16.66■□□□□ 0.26
PSMF1-208ENST00000478004 NALCNQ8IZF0 1738 aa16.66■□□□□ 0.26
PSMF1-208ENST00000478004 ZNF316A6NFI3 1004 aaPredicted RBP16.65■□□□□ 0.26
PSMF1-208ENST00000478004 PRAM1Q96QH2 718 aa16.65■□□□□ 0.26
PSMF1-208ENST00000478004 POGKQ9P215 609 aa16.65■□□□□ 0.26
PSMF1-208ENST00000478004 CENPJQ9HC77 1338 aaPredicted RBP16.65■□□□□ 0.26
PSMF1-208ENST00000478004 LRP6O75581 1613 aa16.63■□□□□ 0.25
PSMF1-208ENST00000478004 LRRC59Q96AG4 307 aaKnown RBP16.63■□□□□ 0.25
PSMF1-208ENST00000478004 SIRT1Q96EB6 747 aa16.63■□□□□ 0.25
PSMF1-208ENST00000478004 WASHC2AQ641Q2 1341 aa16.63■□□□□ 0.25
PSMF1-208ENST00000478004 MYOM1P52179 1685 aa16.62■□□□□ 0.25
PSMF1-208ENST00000478004 KIF7Q2M1P5 1343 aa16.61■□□□□ 0.25
PSMF1-208ENST00000478004 MINK1Q8N4C8 1332 aaPredicted RBP16.6■□□□□ 0.25
PSMF1-208ENST00000478004 CCDC7Q96M83 1385 aa16.59■□□□□ 0.25
PSMF1-208ENST00000478004 SLC24A1O60721 1099 aa16.58■□□□□ 0.24
PSMF1-208ENST00000478004 ADGRB2O60241 1585 aa16.57■□□□□ 0.24
PSMF1-208ENST00000478004 SBNO2Q9Y2G9 1366 aa16.57■□□□□ 0.24
PSMF1-208ENST00000478004 TMF1P82094 1093 aa16.57■□□□□ 0.24
PSMF1-208ENST00000478004 USP32Q8NFA0 1604 aa16.56■□□□□ 0.24
PSMF1-208ENST00000478004 C1orf167Q5SNV9 1468 aa16.56■□□□□ 0.24
PSMF1-208ENST00000478004 CDK12Q9NYV4 1490 aaPredicted RBP16.56■□□□□ 0.24
PSMF1-208ENST00000478004 NUTM2BA6NNL0 878 aaPredicted RBP16.56■□□□□ 0.24
PSMF1-208ENST00000478004 NUTM2EB1AL46 878 aaPredicted RBP16.56■□□□□ 0.24
PSMF1-208ENST00000478004 NUTM2AQ8IVF1 878 aaPredicted RBP16.56■□□□□ 0.24
PSMF1-208ENST00000478004 POLR3GLQ9BT43 218 aa16.56■□□□□ 0.24
PSMF1-208ENST00000478004 RXRBP28702 533 aa16.55■□□□□ 0.24
PSMF1-208ENST00000478004 RGPD8O14715 1765 aaPredicted RBP16.54■□□□□ 0.24
PSMF1-208ENST00000478004 PNPLA6Q8IY17 1366 aa16.54■□□□□ 0.24
PSMF1-208ENST00000478004 CDC42BPGQ6DT37 1551 aa16.54■□□□□ 0.24
PSMF1-208ENST00000478004 EVC2Q86UK5 1308 aa16.53■□□□□ 0.24
PSMF1-208ENST00000478004 FMN2Q9NZ56 1722 aa16.53■□□□□ 0.24
PSMF1-208ENST00000478004 CDCA8Q53HL2 280 aa16.52■□□□□ 0.24
PSMF1-208ENST00000478004 AFF2P51816 1311 aa16.51■□□□□ 0.23
PSMF1-208ENST00000478004 TOPAZ1Q8N9V7 1692 aa16.51■□□□□ 0.23
PSMF1-208ENST00000478004 CABP2Q9NPB3 220 aa16.51■□□□□ 0.23
PSMF1-208ENST00000478004 SOS2Q07890 1332 aaPredicted RBP16.49■□□□□ 0.23
PSMF1-208ENST00000478004 NPHP3Q7Z494 1330 aa16.49■□□□□ 0.23
PSMF1-208ENST00000478004 PRR36Q9H6K5 1346 aa16.49■□□□□ 0.23
PSMF1-208ENST00000478004 SRPK2P78362 688 aaKnown RBP16.49■□□□□ 0.23
PSMF1-208ENST00000478004 DDX10Q13206 875 aaKnown RBP16.49■□□□□ 0.23
PSMF1-208ENST00000478004 C8orf37Q96NL8 207 aa16.49■□□□□ 0.23
PSMF1-208ENST00000478004 CDK19Q9BWU1 502 aa16.49■□□□□ 0.23
PSMF1-208ENST00000478004 COL22A1Q8NFW1 1626 aaPredicted RBP16.48■□□□□ 0.23
PSMF1-208ENST00000478004 ATP7BP35670 1465 aa16.48■□□□□ 0.23
PSMF1-208ENST00000478004 NUTM2FA1L443 756 aa16.48■□□□□ 0.23
PSMF1-208ENST00000478004 WASLO00401 505 aaPredicted RBP16.48■□□□□ 0.23
PSMF1-208ENST00000478004 RBM6P78332 1123 aaKnown RBP16.46■□□□□ 0.23
PSMF1-208ENST00000478004 DDX17Q92841 729 aaKnown RBP16.46■□□□□ 0.23
PSMF1-208ENST00000478004 NGLY1Q96IV0 654 aa16.46■□□□□ 0.23
PSMF1-208ENST00000478004 ORAI2Q96SN7 254 aa16.46■□□□□ 0.23
PSMF1-208ENST00000478004 PUS7Q96PZ0 661 aaKnown RBP16.45■□□□□ 0.22
PSMF1-208ENST00000478004 KIF1AQ12756 1690 aa16.44■□□□□ 0.22
PSMF1-208ENST00000478004 CD163L1Q9NR16 1453 aa16.44■□□□□ 0.22
PSMF1-208ENST00000478004 ESCO1Q5FWF5 840 aa16.44■□□□□ 0.22
PSMF1-208ENST00000478004 UPF1Q92900 1129 aaKnown RBP eCLIP16.44■□□□□ 0.22
PSMF1-208ENST00000478004 QTRT2Q9H974 415 aaKnown RBP16.44■□□□□ 0.22
PSMF1-208ENST00000478004 MARF1Q9Y4F3 1742 aaKnown RBP16.43■□□□□ 0.22
PSMF1-208ENST00000478004 ATAD2Q6PL18 1390 aa16.42■□□□□ 0.22
PSMF1-208ENST00000478004 ADAMTS2O95450 1211 aa16.42■□□□□ 0.22
PSMF1-208ENST00000478004 NUDT16Q96DE0 195 aaKnown RBP16.42■□□□□ 0.22
PSMF1-208ENST00000478004 AKAP12Q02952 1782 aa16.41■□□□□ 0.22
PSMF1-208ENST00000478004 TMC1Q8TDI8 760 aa16.41■□□□□ 0.22
PSMF1-208ENST00000478004 SLC12A5Q9H2X9 1139 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms