RNA–Protein interactions for RNA: ENST00000477893.1

ERCC8-205, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 2

Gene ERCC8, Length 752 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-205ENST00000477893 NRXN3Q9Y4C0 1643 aa12.31□□□□□ -0.44
ERCC8-205ENST00000477893 TBX22Q9Y458 520 aa12.31□□□□□ -0.44
ERCC8-205ENST00000477893 MSH6P52701 1360 aa12.3□□□□□ -0.44
ERCC8-205ENST00000477893 CHD2O14647 1828 aaKnown RBP12.3□□□□□ -0.44
ERCC8-205ENST00000477893 CCDC144AA2RUR9 1427 aa12.3□□□□□ -0.44
ERCC8-205ENST00000477893 PTPRUQ92729 1446 aa12.29□□□□□ -0.44
ERCC8-205ENST00000477893 RGL3Q3MIN7 710 aa12.29□□□□□ -0.44
ERCC8-205ENST00000477893 AMOTL2Q9Y2J4 779 aa12.29□□□□□ -0.44
ERCC8-205ENST00000477893 SETBP1Q9Y6X0 1596 aa12.29□□□□□ -0.44
ERCC8-205ENST00000477893 POTEB2H3BUK9 544 aa12.28□□□□□ -0.44
ERCC8-205ENST00000477893 METP08581 1390 aa12.28□□□□□ -0.44
ERCC8-205ENST00000477893 CREBZFQ9NS37 354 aa12.26□□□□□ -0.45
ERCC8-205ENST00000477893 PIK3R4Q99570 1358 aa12.26□□□□□ -0.45
ERCC8-205ENST00000477893 ROBO1Q9Y6N7 1651 aa12.26□□□□□ -0.45
ERCC8-205ENST00000477893 VGFO15240 615 aaPredicted RBP12.24□□□□□ -0.45
ERCC8-205ENST00000477893 PPLO60437 1756 aa12.24□□□□□ -0.45
ERCC8-205ENST00000477893 MED1Q15648 1581 aaPredicted RBP12.24□□□□□ -0.45
ERCC8-205ENST00000477893 XRN1Q8IZH2 1706 aaKnown RBP12.24□□□□□ -0.45
ERCC8-205ENST00000477893 POTEMA6NI47 508 aa12.23□□□□□ -0.45
ERCC8-205ENST00000477893 ATF3P18847 181 aa12.23□□□□□ -0.45
ERCC8-205ENST00000477893 SLAIN2Q9P270 581 aa12.23□□□□□ -0.45
ERCC8-205ENST00000477893 SPATA31E1Q6ZUB1 1445 aa12.22□□□□□ -0.45
ERCC8-205ENST00000477893 RPGRIP1LQ68CZ1 1315 aa12.22□□□□□ -0.45
ERCC8-205ENST00000477893 ADGRF5Q8IZF2 1346 aa12.22□□□□□ -0.45
ERCC8-205ENST00000477893 ILDR2Q71H61 639 aa12.22□□□□□ -0.45
ERCC8-205ENST00000477893 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.22□□□□□ -0.45
ERCC8-205ENST00000477893 FAM135BQ49AJ0 1406 aa12.21□□□□□ -0.45
ERCC8-205ENST00000477893 SETD1AO15047 1707 aaKnown RBP12.2□□□□□ -0.46
ERCC8-205ENST00000477893 CADPS2Q86UW7 1296 aa12.19□□□□□ -0.46
ERCC8-205ENST00000477893 PHF12Q96QT6 1004 aa12.19□□□□□ -0.46
ERCC8-205ENST00000477893 C19orf44Q9H6X5 657 aa12.19□□□□□ -0.46
ERCC8-205ENST00000477893 STK26Q9P289 416 aa12.19□□□□□ -0.46
ERCC8-205ENST00000477893 NCOA3Q9Y6Q9 1424 aa12.19□□□□□ -0.46
ERCC8-205ENST00000477893 ROBO2Q9HCK4 1378 aa12.18□□□□□ -0.46
ERCC8-205ENST00000477893 ACIN1Q9UKV3 1341 aaKnown RBP12.18□□□□□ -0.46
ERCC8-205ENST00000477893 NALCNQ8IZF0 1738 aa12.18□□□□□ -0.46
ERCC8-205ENST00000477893 IFT172Q9UG01 1749 aa12.18□□□□□ -0.46
ERCC8-205ENST00000477893 POTEGQ6S5H5 508 aa12.18□□□□□ -0.46
ERCC8-205ENST00000477893 ANKRD30BQ9BXX2 1392 aa12.18□□□□□ -0.46
ERCC8-205ENST00000477893 PHLPP1O60346 1717 aa12.17□□□□□ -0.46
ERCC8-205ENST00000477893 PTCH1Q13635 1447 aa12.17□□□□□ -0.46
ERCC8-205ENST00000477893 ADGRL3Q9HAR2 1447 aa12.17□□□□□ -0.46
ERCC8-205ENST00000477893 TMEM132EQ6IEE7 984 aa12.16□□□□□ -0.46
ERCC8-205ENST00000477893 PIK3C2GO75747 1445 aa12.15□□□□□ -0.46
ERCC8-205ENST00000477893 MST1RQ04912 1400 aa12.15□□□□□ -0.46
ERCC8-205ENST00000477893 ASXL1Q8IXJ9 1541 aa12.15□□□□□ -0.46
ERCC8-205ENST00000477893 DCCP43146 1447 aa12.14□□□□□ -0.47
ERCC8-205ENST00000477893 BRINP3Q76B58 766 aa12.14□□□□□ -0.47
ERCC8-205ENST00000477893 PELP1Q8IZL8 1130 aaKnown RBP12.14□□□□□ -0.47
ERCC8-205ENST00000477893 COL16A1Q07092 1604 aaPredicted RBP12.13□□□□□ -0.47
ERCC8-205ENST00000477893 PAK3O75914 559 aaPredicted RBP12.13□□□□□ -0.47
ERCC8-205ENST00000477893 DDX17Q92841 729 aaKnown RBP12.13□□□□□ -0.47
ERCC8-205ENST00000477893 KDM2AQ9Y2K7 1162 aa12.13□□□□□ -0.47
ERCC8-205ENST00000477893 CFAP70Q5T0N1 1121 aa12.12□□□□□ -0.47
ERCC8-205ENST00000477893 WAPLQ7Z5K2 1190 aa12.12□□□□□ -0.47
ERCC8-205ENST00000477893 PLEKHH1Q9ULM0 1364 aa12.12□□□□□ -0.47
ERCC8-205ENST00000477893 MYOM2P54296 1465 aa12.12□□□□□ -0.47
ERCC8-205ENST00000477893 LRPPRCP42704 1394 aaKnown RBP12.11□□□□□ -0.47
ERCC8-205ENST00000477893 JCADQ9P266 1359 aa12.11□□□□□ -0.47
ERCC8-205ENST00000477893 NUTM2FA1L443 756 aa12.11□□□□□ -0.47
ERCC8-205ENST00000477893 DCAF11Q8TEB1 546 aa12.11□□□□□ -0.47
ERCC8-205ENST00000477893 AHDC1Q5TGY3 1603 aaPredicted RBP12.11□□□□□ -0.47
ERCC8-205ENST00000477893 YTHDC2Q9H6S0 1430 aaKnown RBP12.11□□□□□ -0.47
ERCC8-205ENST00000477893 SAFB2Q14151 953 aaKnown RBP eCLIP12.1□□□□□ -0.47
ERCC8-205ENST00000477893 C1orf167Q5SNV9 1468 aa12.09□□□□□ -0.47
ERCC8-205ENST00000477893 NRXN1Q9ULB1 1477 aa12.09□□□□□ -0.47
ERCC8-205ENST00000477893 HRCP23327 699 aa12.09□□□□□ -0.47
ERCC8-205ENST00000477893 PRAG1Q86YV5 1406 aa12.09□□□□□ -0.47
ERCC8-205ENST00000477893 NUTM2BA6NNL0 878 aaPredicted RBP12.08□□□□□ -0.48
ERCC8-205ENST00000477893 NUTM2EB1AL46 878 aaPredicted RBP12.08□□□□□ -0.48
ERCC8-205ENST00000477893 MEX3CQ5U5Q3 659 aaKnown RBP12.08□□□□□ -0.48
ERCC8-205ENST00000477893 NUTM2AQ8IVF1 878 aaPredicted RBP12.08□□□□□ -0.48
ERCC8-205ENST00000477893 ORAI2Q96SN7 254 aa12.08□□□□□ -0.48
ERCC8-205ENST00000477893 C14orf93Q9H972 538 aaKnown RBP12.08□□□□□ -0.48
ERCC8-205ENST00000477893 KNDC1Q76NI1 1749 aa12.08□□□□□ -0.48
ERCC8-205ENST00000477893 LAMC1P11047 1609 aa12.08□□□□□ -0.48
ERCC8-205ENST00000477893 TECPR2O15040 1411 aa12.07□□□□□ -0.48
ERCC8-205ENST00000477893 LRP6O75581 1613 aa12.07□□□□□ -0.48
ERCC8-205ENST00000477893 NHSL1Q5SYE7 1610 aa12.07□□□□□ -0.48
ERCC8-205ENST00000477893 DHX57Q6P158 1386 aaKnown RBP12.06□□□□□ -0.48
ERCC8-205ENST00000477893 ABCC11Q96J66 1382 aa12.06□□□□□ -0.48
ERCC8-205ENST00000477893 CDC42BPGQ6DT37 1551 aa12.06□□□□□ -0.48
ERCC8-205ENST00000477893 SOCS7O14512 581 aa12.05□□□□□ -0.48
ERCC8-205ENST00000477893 XPCQ01831 940 aaPredicted RBP12.05□□□□□ -0.48
ERCC8-205ENST00000477893 ESCO1Q5FWF5 840 aa12.05□□□□□ -0.48
ERCC8-205ENST00000477893 PRAM1Q96QH2 718 aa12.05□□□□□ -0.48
ERCC8-205ENST00000477893 RGS17Q9UGC6 210 aaPredicted RBP12.05□□□□□ -0.48
ERCC8-205ENST00000477893 TRAK1Q9UPV9 953 aa12.05□□□□□ -0.48
ERCC8-205ENST00000477893 SHPRHQ149N8 1683 aa12.04□□□□□ -0.48
ERCC8-205ENST00000477893 POGKQ9P215 609 aa12.04□□□□□ -0.48
ERCC8-205ENST00000477893 HIRIP3Q9BW71 556 aaPredicted RBP12.03□□□□□ -0.48
ERCC8-205ENST00000477893 ADGRB1O14514 1584 aa12.03□□□□□ -0.48
ERCC8-205ENST00000477893 SPATA31A6Q5VVP1 1343 aa12.03□□□□□ -0.48
ERCC8-205ENST00000477893 METRNQ9UJH8 293 aa12.02□□□□□ -0.49
ERCC8-205ENST00000477893 NEUROD1Q13562 356 aa12.01□□□□□ -0.49
ERCC8-205ENST00000477893 POTEAQ6S8J7 498 aa12.01□□□□□ -0.49
ERCC8-205ENST00000477893 LRRC59Q96AG4 307 aaKnown RBP12.01□□□□□ -0.49
ERCC8-205ENST00000477893 MINK1Q8N4C8 1332 aaPredicted RBP12.01□□□□□ -0.49
ERCC8-205ENST00000477893 PNPLA6Q8IY17 1366 aa12.01□□□□□ -0.49
ERCC8-205ENST00000477893 FMN2Q9NZ56 1722 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms