RNA–Protein interactions for RNA: ENST00000477696.5

CD40-205, Transcript of CD40 molecule, humanhuman

TSL 5

Gene CD40, Length 771 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-205ENST00000477696 ROBO2Q9HCK4 1378 aa12.51□□□□□ -0.41
CD40-205ENST00000477696 TRIM26Q12899 539 aaPredicted RBP12.5□□□□□ -0.41
CD40-205ENST00000477696 SIRT1Q96EB6 747 aa12.5□□□□□ -0.41
CD40-205ENST00000477696 STK26Q9P289 416 aa12.5□□□□□ -0.41
CD40-205ENST00000477696 DHX57Q6P158 1386 aaKnown RBP12.5□□□□□ -0.41
CD40-205ENST00000477696 ABCC11Q96J66 1382 aa12.5□□□□□ -0.41
CD40-205ENST00000477696 C1orf167Q5SNV9 1468 aa12.5□□□□□ -0.41
CD40-205ENST00000477696 MARF1Q9Y4F3 1742 aaKnown RBP12.5□□□□□ -0.41
CD40-205ENST00000477696 TECPR2O15040 1411 aa12.49□□□□□ -0.41
CD40-205ENST00000477696 TMEM132EQ6IEE7 984 aa12.49□□□□□ -0.41
CD40-205ENST00000477696 KDM2AQ9Y2K7 1162 aa12.49□□□□□ -0.41
CD40-205ENST00000477696 CDK12Q9NYV4 1490 aaPredicted RBP12.48□□□□□ -0.41
CD40-205ENST00000477696 YTHDC2Q9H6S0 1430 aaKnown RBP12.48□□□□□ -0.41
CD40-205ENST00000477696 CFAP70Q5T0N1 1121 aa12.48□□□□□ -0.41
CD40-205ENST00000477696 FMN2Q9NZ56 1722 aa12.48□□□□□ -0.41
CD40-205ENST00000477696 PNPLA6Q8IY17 1366 aa12.47□□□□□ -0.41
CD40-205ENST00000477696 WAPLQ7Z5K2 1190 aa12.45□□□□□ -0.42
CD40-205ENST00000477696 KIF1AQ12756 1690 aa12.45□□□□□ -0.42
CD40-205ENST00000477696 ZNF772Q68DY9 489 aaPredicted RBP12.44□□□□□ -0.42
CD40-205ENST00000477696 POGKQ9P215 609 aa12.43□□□□□ -0.42
CD40-205ENST00000477696 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.42□□□□□ -0.42
CD40-205ENST00000477696 PXDNQ92626 1479 aa12.42□□□□□ -0.42
CD40-205ENST00000477696 MEX3CQ5U5Q3 659 aaKnown RBP12.42□□□□□ -0.42
CD40-205ENST00000477696 RGPD8O14715 1765 aaPredicted RBP12.42□□□□□ -0.42
CD40-205ENST00000477696 DLC1Q96QB1 1528 aa12.42□□□□□ -0.42
CD40-205ENST00000477696 SOS2Q07890 1332 aaPredicted RBP12.41□□□□□ -0.42
CD40-205ENST00000477696 LRRC59Q96AG4 307 aaKnown RBP12.41□□□□□ -0.42
CD40-205ENST00000477696 PRAM1Q96QH2 718 aa12.41□□□□□ -0.42
CD40-205ENST00000477696 ABCA3Q99758 1704 aa12.4□□□□□ -0.42
CD40-205ENST00000477696 ADGRB1O14514 1584 aa12.4□□□□□ -0.42
CD40-205ENST00000477696 ESCO1Q5FWF5 840 aa12.4□□□□□ -0.42
CD40-205ENST00000477696 PLEKHH1Q9ULM0 1364 aa12.4□□□□□ -0.42
CD40-205ENST00000477696 DDX17Q92841 729 aaKnown RBP12.39□□□□□ -0.43
CD40-205ENST00000477696 ORAI2Q96SN7 254 aa12.39□□□□□ -0.43
CD40-205ENST00000477696 TRAK1Q9UPV9 953 aa12.39□□□□□ -0.43
CD40-205ENST00000477696 KIAA1210Q9ULL0 1709 aa12.39□□□□□ -0.43
CD40-205ENST00000477696 ADGRB2O60241 1585 aa12.39□□□□□ -0.43
CD40-205ENST00000477696 AFF2P51816 1311 aa12.38□□□□□ -0.43
CD40-205ENST00000477696 RGS12O14924 1447 aa12.38□□□□□ -0.43
CD40-205ENST00000477696 NEUROD1Q13562 356 aa12.38□□□□□ -0.43
CD40-205ENST00000477696 NPHP3Q7Z494 1330 aa12.37□□□□□ -0.43
CD40-205ENST00000477696 SAFB2Q14151 953 aaKnown RBP eCLIP12.37□□□□□ -0.43
CD40-205ENST00000477696 L3MBTL2Q969R5 705 aa12.37□□□□□ -0.43
CD40-205ENST00000477696 SIN3AQ96ST3 1273 aa12.37□□□□□ -0.43
CD40-205ENST00000477696 USP32Q8NFA0 1604 aa12.37□□□□□ -0.43
CD40-205ENST00000477696 EIF3AQ14152 1382 aaKnown RBP12.36□□□□□ -0.43
CD40-205ENST00000477696 NUTM2BA6NNL0 878 aaPredicted RBP12.36□□□□□ -0.43
CD40-205ENST00000477696 NUTM2EB1AL46 878 aaPredicted RBP12.36□□□□□ -0.43
CD40-205ENST00000477696 NUTM2AQ8IVF1 878 aaPredicted RBP12.36□□□□□ -0.43
CD40-205ENST00000477696 NUTM2FA1L443 756 aa12.35□□□□□ -0.43
CD40-205ENST00000477696 RXRBP28702 533 aa12.34□□□□□ -0.43
CD40-205ENST00000477696 PLCH1Q4KWH8 1693 aa12.33□□□□□ -0.44
CD40-205ENST00000477696 FOXO3O43524 673 aa12.33□□□□□ -0.44
CD40-205ENST00000477696 UPF1Q92900 1129 aaKnown RBP eCLIP12.33□□□□□ -0.44
CD40-205ENST00000477696 C8orf37Q96NL8 207 aa12.33□□□□□ -0.44
CD40-205ENST00000477696 ATRNO75882 1429 aa12.33□□□□□ -0.44
CD40-205ENST00000477696 ANKARQ7Z5J8 1434 aa12.33□□□□□ -0.44
CD40-205ENST00000477696 TRPM3Q9HCF6 1732 aaPredicted RBP12.33□□□□□ -0.44
CD40-205ENST00000477696 NWD2Q9ULI1 1742 aa12.33□□□□□ -0.44
CD40-205ENST00000477696 MINK1Q8N4C8 1332 aaPredicted RBP12.33□□□□□ -0.44
CD40-205ENST00000477696 ARHGEF28Q8N1W1 1705 aaKnown RBP12.32□□□□□ -0.44
CD40-205ENST00000477696 CRYBG1Q9Y4K1 1723 aa12.32□□□□□ -0.44
CD40-205ENST00000477696 WASLO00401 505 aaPredicted RBP12.32□□□□□ -0.44
CD40-205ENST00000477696 PSME1Q06323 249 aa12.32□□□□□ -0.44
CD40-205ENST00000477696 HIRIP3Q9BW71 556 aaPredicted RBP12.32□□□□□ -0.44
CD40-205ENST00000477696 PHF8Q9UPP1 1060 aa12.32□□□□□ -0.44
CD40-205ENST00000477696 RBM6P78332 1123 aaKnown RBP12.31□□□□□ -0.44
CD40-205ENST00000477696 NBPF1Q3BBV0 1214 aa12.31□□□□□ -0.44
CD40-205ENST00000477696 ALS2Q96Q42 1657 aa12.3□□□□□ -0.44
CD40-205ENST00000477696 BCL9LQ86UU0 1499 aa12.3□□□□□ -0.44
CD40-205ENST00000477696 FNBP4Q8N3X1 1017 aaPredicted RBP12.3□□□□□ -0.44
CD40-205ENST00000477696 ITSN1Q15811 1721 aa12.3□□□□□ -0.44
CD40-205ENST00000477696 GLI3P10071 1580 aa12.3□□□□□ -0.44
CD40-205ENST00000477696 TONSLQ96HA7 1378 aa12.3□□□□□ -0.44
CD40-205ENST00000477696 NRAPQ86VF7 1730 aa12.29□□□□□ -0.44
CD40-205ENST00000477696 KRT28Q7Z3Y7 464 aa12.29□□□□□ -0.44
CD40-205ENST00000477696 BRWD3Q6RI45 1802 aa12.29□□□□□ -0.44
CD40-205ENST00000477696 SLIT2O94813 1529 aa12.28□□□□□ -0.44
CD40-205ENST00000477696 TULP4Q9NRJ4 1543 aa12.28□□□□□ -0.44
CD40-205ENST00000477696 ADAMTS2O95450 1211 aa12.28□□□□□ -0.44
CD40-205ENST00000477696 QTRT2Q9H974 415 aaKnown RBP12.28□□□□□ -0.44
CD40-205ENST00000477696 CENPJQ9HC77 1338 aaPredicted RBP12.28□□□□□ -0.44
CD40-205ENST00000477696 ROCK2O75116 1388 aaKnown RBP12.28□□□□□ -0.44
CD40-205ENST00000477696 TNS3Q68CZ2 1445 aa12.28□□□□□ -0.44
CD40-205ENST00000477696 TRPM1Q7Z4N2 1603 aa12.27□□□□□ -0.44
CD40-205ENST00000477696 XPCQ01831 940 aaPredicted RBP12.27□□□□□ -0.45
CD40-205ENST00000477696 NGLY1Q96IV0 654 aa12.27□□□□□ -0.45
CD40-205ENST00000477696 CDK19Q9BWU1 502 aa12.27□□□□□ -0.45
CD40-205ENST00000477696 TOPAZ1Q8N9V7 1692 aa12.26□□□□□ -0.45
CD40-205ENST00000477696 PMFBP1Q8TBY8 1022 aa12.26□□□□□ -0.45
CD40-205ENST00000477696 NUDT16Q96DE0 195 aaKnown RBP12.26□□□□□ -0.45
CD40-205ENST00000477696 USP21Q9UK80 565 aa12.26□□□□□ -0.45
CD40-205ENST00000477696 TRPC5Q9UL62 973 aaPredicted RBP12.26□□□□□ -0.45
CD40-205ENST00000477696 SPATA31A3Q5VYP0 1347 aa12.26□□□□□ -0.45
CD40-205ENST00000477696 SBNO1A3KN83 1393 aa12.26□□□□□ -0.45
CD40-205ENST00000477696 GPRASP1Q5JY77 1395 aa12.26□□□□□ -0.45
CD40-205ENST00000477696 SRCAPQ6ZRS2 3230 aa12.26□□□□□ -0.45
CD40-205ENST00000477696 NGDNQ8NEJ9 315 aaKnown RBP12.25□□□□□ -0.45
CD40-205ENST00000477696 ATAD2Q6PL18 1390 aa12.25□□□□□ -0.45
CD40-205ENST00000477696 ARHGEF10O15013 1369 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms