RNA–Protein interactions for RNA: ENST00000477613.6

RPL13A-208, Transcript of ribosomal protein L13a, humanhuman

TSL 5

Gene RPL13A, Length 796 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL13A-208ENST00000477613 PLEKHH1Q9ULM0 1364 aa25.5■■□□□ 1.67
RPL13A-208ENST00000477613 DLC1Q96QB1 1528 aa25.49■■□□□ 1.67
RPL13A-208ENST00000477613 ILDR2Q71H61 639 aa25.49■■□□□ 1.67
RPL13A-208ENST00000477613 PHF23Q9BUL5 403 aaPredicted RBP25.49■■□□□ 1.67
RPL13A-208ENST00000477613 SHPRHQ149N8 1683 aa25.47■■□□□ 1.67
RPL13A-208ENST00000477613 TRIM26Q12899 539 aaPredicted RBP25.46■■□□□ 1.67
RPL13A-208ENST00000477613 SPATA31A6Q5VVP1 1343 aa25.42■■□□□ 1.66
RPL13A-208ENST00000477613 ORAI2Q96SN7 254 aa25.42■■□□□ 1.66
RPL13A-208ENST00000477613 FMN2Q9NZ56 1722 aa25.42■■□□□ 1.66
RPL13A-208ENST00000477613 PRAM1Q96QH2 718 aa25.41■■□□□ 1.66
RPL13A-208ENST00000477613 KIAA1210Q9ULL0 1709 aa25.4■■□□□ 1.66
RPL13A-208ENST00000477613 DDX17Q92841 729 aaKnown RBP25.39■■□□□ 1.66
RPL13A-208ENST00000477613 LRRC59Q96AG4 307 aaKnown RBP25.38■■□□□ 1.65
RPL13A-208ENST00000477613 POGKQ9P215 609 aa25.38■■□□□ 1.65
RPL13A-208ENST00000477613 TRAK1Q9UPV9 953 aa25.38■■□□□ 1.65
RPL13A-208ENST00000477613 ADGRB2O60241 1585 aa25.37■■□□□ 1.65
RPL13A-208ENST00000477613 ESCO1Q5FWF5 840 aa25.36■■□□□ 1.65
RPL13A-208ENST00000477613 LRP6O75581 1613 aa25.36■■□□□ 1.65
RPL13A-208ENST00000477613 SAFB2Q14151 953 aaKnown RBP eCLIP25.35■■□□□ 1.65
RPL13A-208ENST00000477613 SOS2Q07890 1332 aaPredicted RBP25.35■■□□□ 1.65
RPL13A-208ENST00000477613 NUTM2FA1L443 756 aa25.34■■□□□ 1.65
RPL13A-208ENST00000477613 ARHGEF28Q8N1W1 1705 aaKnown RBP25.34■■□□□ 1.65
RPL13A-208ENST00000477613 NPHP3Q7Z494 1330 aa25.34■■□□□ 1.65
RPL13A-208ENST00000477613 KIF1AQ12756 1690 aa25.33■■□□□ 1.65
RPL13A-208ENST00000477613 SIN3AQ96ST3 1273 aa25.33■■□□□ 1.65
RPL13A-208ENST00000477613 PNPLA6Q8IY17 1366 aa25.32■■□□□ 1.64
RPL13A-208ENST00000477613 RGS17Q9UGC6 210 aaPredicted RBP25.32■■□□□ 1.64
RPL13A-208ENST00000477613 L3MBTL2Q969R5 705 aa25.3■■□□□ 1.64
RPL13A-208ENST00000477613 PXDNQ92626 1479 aa25.29■■□□□ 1.64
RPL13A-208ENST00000477613 NEUROD1Q13562 356 aa25.28■■□□□ 1.64
RPL13A-208ENST00000477613 MEX3CQ5U5Q3 659 aaKnown RBP25.28■■□□□ 1.64
RPL13A-208ENST00000477613 ANKARQ7Z5J8 1434 aa25.28■■□□□ 1.64
RPL13A-208ENST00000477613 SOCS7O14512 581 aa25.27■■□□□ 1.64
RPL13A-208ENST00000477613 RGPD8O14715 1765 aaPredicted RBP25.26■■□□□ 1.63
RPL13A-208ENST00000477613 FOXO3O43524 673 aa25.26■■□□□ 1.63
RPL13A-208ENST00000477613 MINK1Q8N4C8 1332 aaPredicted RBP25.26■■□□□ 1.63
RPL13A-208ENST00000477613 EIF3AQ14152 1382 aaKnown RBP25.26■■□□□ 1.63
RPL13A-208ENST00000477613 NUTM2BA6NNL0 878 aaPredicted RBP25.25■■□□□ 1.63
RPL13A-208ENST00000477613 NUTM2EB1AL46 878 aaPredicted RBP25.25■■□□□ 1.63
RPL13A-208ENST00000477613 NUTM2AQ8IVF1 878 aaPredicted RBP25.25■■□□□ 1.63
RPL13A-208ENST00000477613 USP32Q8NFA0 1604 aa25.25■■□□□ 1.63
RPL13A-208ENST00000477613 NBPF1Q3BBV0 1214 aa25.24■■□□□ 1.63
RPL13A-208ENST00000477613 HIRIP3Q9BW71 556 aaPredicted RBP25.24■■□□□ 1.63
RPL13A-208ENST00000477613 COL22A1Q8NFW1 1626 aaPredicted RBP25.23■■□□□ 1.63
RPL13A-208ENST00000477613 TULP4Q9NRJ4 1543 aa25.23■■□□□ 1.63
RPL13A-208ENST00000477613 PHF8Q9UPP1 1060 aa25.22■■□□□ 1.63
RPL13A-208ENST00000477613 TRPM1Q7Z4N2 1603 aa25.21■■□□□ 1.63
RPL13A-208ENST00000477613 WASLO00401 505 aaPredicted RBP25.2■■□□□ 1.62
RPL13A-208ENST00000477613 XPCQ01831 940 aaPredicted RBP25.2■■□□□ 1.62
RPL13A-208ENST00000477613 POTEAQ6S8J7 498 aa25.2■■□□□ 1.62
RPL13A-208ENST00000477613 ZNF772Q68DY9 489 aaPredicted RBP25.17■■□□□ 1.62
RPL13A-208ENST00000477613 PRR36Q9H6K5 1346 aa25.15■■□□□ 1.62
RPL13A-208ENST00000477613 KRT28Q7Z3Y7 464 aa25.15■■□□□ 1.62
RPL13A-208ENST00000477613 SPATA31A3Q5VYP0 1347 aa25.14■■□□□ 1.62
RPL13A-208ENST00000477613 TONSLQ96HA7 1378 aa25.14■■□□□ 1.61
RPL13A-208ENST00000477613 ITSN1Q15811 1721 aa25.14■■□□□ 1.61
RPL13A-208ENST00000477613 PSME1Q06323 249 aa25.13■■□□□ 1.61
RPL13A-208ENST00000477613 ATP7BP35670 1465 aa25.13■■□□□ 1.61
RPL13A-208ENST00000477613 CENPJQ9HC77 1338 aaPredicted RBP25.12■■□□□ 1.61
RPL13A-208ENST00000477613 TNS3Q68CZ2 1445 aa25.12■■□□□ 1.61
RPL13A-208ENST00000477613 PMFBP1Q8TBY8 1022 aa25.12■■□□□ 1.61
RPL13A-208ENST00000477613 ROCK2O75116 1388 aaKnown RBP25.12■■□□□ 1.61
RPL13A-208ENST00000477613 AFF2P51816 1311 aa25.12■■□□□ 1.61
RPL13A-208ENST00000477613 SBNO1A3KN83 1393 aa25.11■■□□□ 1.61
RPL13A-208ENST00000477613 C8orf37Q96NL8 207 aa25.11■■□□□ 1.61
RPL13A-208ENST00000477613 QRICH2Q9H0J4 1663 aa25.1■■□□□ 1.61
RPL13A-208ENST00000477613 ADAMTS2O95450 1211 aa25.1■■□□□ 1.61
RPL13A-208ENST00000477613 CDK19Q9BWU1 502 aa25.08■■□□□ 1.61
RPL13A-208ENST00000477613 TOPAZ1Q8N9V7 1692 aa25.07■■□□□ 1.6
RPL13A-208ENST00000477613 GPRASP1Q5JY77 1395 aa25.07■■□□□ 1.6
RPL13A-208ENST00000477613 NBPF8Q3BBV2 869 aa25.07■■□□□ 1.6
RPL13A-208ENST00000477613 NUDT16Q96DE0 195 aaKnown RBP25.07■■□□□ 1.6
RPL13A-208ENST00000477613 ARHGEF10O15013 1369 aa25.06■■□□□ 1.6
RPL13A-208ENST00000477613 TRPM3Q9HCF6 1732 aaPredicted RBP25.06■■□□□ 1.6
RPL13A-208ENST00000477613 MARF1Q9Y4F3 1742 aaKnown RBP25.06■■□□□ 1.6
RPL13A-208ENST00000477613 NGLY1Q96IV0 654 aa25.05■■□□□ 1.6
RPL13A-208ENST00000477613 NGDNQ8NEJ9 315 aaKnown RBP25.04■■□□□ 1.6
RPL13A-208ENST00000477613 RALGAPBQ86X10 1494 aa25.02■■□□□ 1.6
RPL13A-208ENST00000477613 ALS2Q96Q42 1657 aa25.01■■□□□ 1.59
RPL13A-208ENST00000477613 CCDC61Q9Y6R9 512 aa25.01■■□□□ 1.59
RPL13A-208ENST00000477613 LMOD2Q6P5Q4 547 aa25■■□□□ 1.59
RPL13A-208ENST00000477613 ABCA3Q99758 1704 aa25■■□□□ 1.59
RPL13A-208ENST00000477613 POLR3AO14802 1390 aaPredicted RBP24.99■■□□□ 1.59
RPL13A-208ENST00000477613 RXRBP28702 533 aa24.99■■□□□ 1.59
RPL13A-208ENST00000477613 SRPK2P78362 688 aaKnown RBP24.99■■□□□ 1.59
RPL13A-208ENST00000477613 FNBP4Q8N3X1 1017 aaPredicted RBP24.99■■□□□ 1.59
RPL13A-208ENST00000477613 CDK12Q9NYV4 1490 aaPredicted RBP24.97■■□□□ 1.59
RPL13A-208ENST00000477613 QTRT2Q9H974 415 aaKnown RBP24.97■■□□□ 1.59
RPL13A-208ENST00000477613 USP21Q9UK80 565 aa24.97■■□□□ 1.59
RPL13A-208ENST00000477613 PLEKHG3A1L390 1219 aa24.96■■□□□ 1.59
RPL13A-208ENST00000477613 HAP1P54257 671 aaPredicted RBP24.96■■□□□ 1.59
RPL13A-208ENST00000477613 CARD11Q9BXL7 1154 aa24.96■■□□□ 1.59
RPL13A-208ENST00000477613 PCGF6Q9BYE7 350 aa24.96■■□□□ 1.59
RPL13A-208ENST00000477613 EVC2Q86UK5 1308 aa24.95■■□□□ 1.58
RPL13A-208ENST00000477613 CABP2Q9NPB3 220 aa24.95■■□□□ 1.58
RPL13A-208ENST00000477613 PPIP5K1Q6PFW1 1433 aa24.95■■□□□ 1.58
RPL13A-208ENST00000477613 ACEP12821 1306 aa24.94■■□□□ 1.58
RPL13A-208ENST00000477613 CABLES1Q8TDN4 633 aa24.94■■□□□ 1.58
RPL13A-208ENST00000477613 CLSPNQ9HAW4 1339 aa24.93■■□□□ 1.58
RPL13A-208ENST00000477613 RBM6P78332 1123 aaKnown RBP24.93■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms