RNA–Protein interactions for RNA: ENST00000477563.6

RBBP4-211, Transcript of RB binding protein 4, chromatin remodeling factor, humanhuman

TSL 5

Gene RBBP4, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBBP4-211ENST00000477563 METP08581 1390 aa11.79□□□□□ -0.52
RBBP4-211ENST00000477563 RGS12O14924 1447 aa11.78□□□□□ -0.52
RBBP4-211ENST00000477563 NEXMIFQ5QGS0 1516 aa11.78□□□□□ -0.52
RBBP4-211ENST00000477563 PNPLA6Q8IY17 1366 aa11.78□□□□□ -0.52
RBBP4-211ENST00000477563 PRAG1Q86YV5 1406 aa11.77□□□□□ -0.52
RBBP4-211ENST00000477563 RBM6P78332 1123 aaKnown RBP11.77□□□□□ -0.53
RBBP4-211ENST00000477563 NUTM2BA6NNL0 878 aaPredicted RBP11.76□□□□□ -0.53
RBBP4-211ENST00000477563 NUTM2EB1AL46 878 aaPredicted RBP11.76□□□□□ -0.53
RBBP4-211ENST00000477563 NUTM2AQ8IVF1 878 aaPredicted RBP11.76□□□□□ -0.53
RBBP4-211ENST00000477563 KIF1BO60333 1816 aa11.76□□□□□ -0.53
RBBP4-211ENST00000477563 COL22A1Q8NFW1 1626 aaPredicted RBP11.75□□□□□ -0.53
RBBP4-211ENST00000477563 QTRT2Q9H974 415 aaKnown RBP11.75□□□□□ -0.53
RBBP4-211ENST00000477563 C1orf167Q5SNV9 1468 aa11.75□□□□□ -0.53
RBBP4-211ENST00000477563 CLTCL1P53675 1640 aa11.75□□□□□ -0.53
RBBP4-211ENST00000477563 PTCH1Q13635 1447 aa11.74□□□□□ -0.53
RBBP4-211ENST00000477563 SOS2Q07890 1332 aaPredicted RBP11.73□□□□□ -0.53
RBBP4-211ENST00000477563 C8orf37Q96NL8 207 aa11.73□□□□□ -0.53
RBBP4-211ENST00000477563 MARF1Q9Y4F3 1742 aaKnown RBP11.72□□□□□ -0.53
RBBP4-211ENST00000477563 FNBP4Q8N3X1 1017 aaPredicted RBP11.71□□□□□ -0.53
RBBP4-211ENST00000477563 DDX17Q92841 729 aaKnown RBP11.71□□□□□ -0.53
RBBP4-211ENST00000477563 NGLY1Q96IV0 654 aa11.71□□□□□ -0.53
RBBP4-211ENST00000477563 ZNF326Q5BKZ1 582 aaKnown RBP11.7□□□□□ -0.54
RBBP4-211ENST00000477563 RBM42Q9BTD8 480 aaKnown RBP11.7□□□□□ -0.54
RBBP4-211ENST00000477563 ATRNO75882 1429 aa11.69□□□□□ -0.54
RBBP4-211ENST00000477563 ATAD2Q6PL18 1390 aa11.69□□□□□ -0.54
RBBP4-211ENST00000477563 ZBTB12Q9Y330 459 aaPredicted RBP11.69□□□□□ -0.54
RBBP4-211ENST00000477563 PPLO60437 1756 aa11.69□□□□□ -0.54
RBBP4-211ENST00000477563 ROBO2Q9HCK4 1378 aa11.68□□□□□ -0.54
RBBP4-211ENST00000477563 TRPC5Q9UL62 973 aaPredicted RBP11.68□□□□□ -0.54
RBBP4-211ENST00000477563 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.68□□□□□ -0.54
RBBP4-211ENST00000477563 MYOM2P54296 1465 aa11.68□□□□□ -0.54
RBBP4-211ENST00000477563 HFM1A2PYH4 1435 aa11.68□□□□□ -0.54
RBBP4-211ENST00000477563 VGFO15240 615 aaPredicted RBP11.67□□□□□ -0.54
RBBP4-211ENST00000477563 ORAI2Q96SN7 254 aa11.67□□□□□ -0.54
RBBP4-211ENST00000477563 USP21Q9UK80 565 aa11.67□□□□□ -0.54
RBBP4-211ENST00000477563 CDC42BPGQ6DT37 1551 aa11.67□□□□□ -0.54
RBBP4-211ENST00000477563 RPGRIP1LQ68CZ1 1315 aa11.66□□□□□ -0.54
RBBP4-211ENST00000477563 ADAMTS2O95450 1211 aa11.66□□□□□ -0.54
RBBP4-211ENST00000477563 BCL9LQ86UU0 1499 aa11.65□□□□□ -0.54
RBBP4-211ENST00000477563 PXDNQ92626 1479 aa11.65□□□□□ -0.54
RBBP4-211ENST00000477563 CCDC125Q86Z20 511 aa11.65□□□□□ -0.54
RBBP4-211ENST00000477563 NAIPQ13075 1403 aa11.64□□□□□ -0.55
RBBP4-211ENST00000477563 NPHP3Q7Z494 1330 aa11.62□□□□□ -0.55
RBBP4-211ENST00000477563 ITGAEP38570 1179 aa11.62□□□□□ -0.55
RBBP4-211ENST00000477563 KNDC1Q76NI1 1749 aa11.62□□□□□ -0.55
RBBP4-211ENST00000477563 TECPR2O15040 1411 aa11.61□□□□□ -0.55
RBBP4-211ENST00000477563 RRBP1Q9P2E9 1410 aaKnown RBP11.61□□□□□ -0.55
RBBP4-211ENST00000477563 IFT172Q9UG01 1749 aa11.6□□□□□ -0.55
RBBP4-211ENST00000477563 LRPPRCP42704 1394 aaKnown RBP11.6□□□□□ -0.55
RBBP4-211ENST00000477563 GJD4Q96KN9 370 aaPredicted RBP11.6□□□□□ -0.55
RBBP4-211ENST00000477563 ZRANB1Q9UGI0 708 aa11.6□□□□□ -0.55
RBBP4-211ENST00000477563 SLIT2O94813 1529 aa11.6□□□□□ -0.55
RBBP4-211ENST00000477563 GLI3P10071 1580 aa11.59□□□□□ -0.55
RBBP4-211ENST00000477563 BRWD3Q6RI45 1802 aa11.59□□□□□ -0.55
RBBP4-211ENST00000477563 FMN2Q9NZ56 1722 aa11.59□□□□□ -0.55
RBBP4-211ENST00000477563 KIF1AQ12756 1690 aa11.59□□□□□ -0.55
RBBP4-211ENST00000477563 ESCO1Q5FWF5 840 aa11.58□□□□□ -0.56
RBBP4-211ENST00000477563 NWD2Q9ULI1 1742 aa11.57□□□□□ -0.56
RBBP4-211ENST00000477563 USP32Q8NFA0 1604 aa11.57□□□□□ -0.56
RBBP4-211ENST00000477563 ABCC11Q96J66 1382 aa11.56□□□□□ -0.56
RBBP4-211ENST00000477563 FOXO3O43524 673 aa11.56□□□□□ -0.56
RBBP4-211ENST00000477563 BLMP54132 1417 aaPredicted RBP11.56□□□□□ -0.56
RBBP4-211ENST00000477563 UNC5CLQ8IV45 518 aa11.56□□□□□ -0.56
RBBP4-211ENST00000477563 RALGAPBQ86X10 1494 aa11.56□□□□□ -0.56
RBBP4-211ENST00000477563 SPATA31E1Q6ZUB1 1445 aa11.55□□□□□ -0.56
RBBP4-211ENST00000477563 RGPD8O14715 1765 aaPredicted RBP11.55□□□□□ -0.56
RBBP4-211ENST00000477563 SPATA31A3Q5VYP0 1347 aa11.55□□□□□ -0.56
RBBP4-211ENST00000477563 CCDC144AA2RUR9 1427 aa11.54□□□□□ -0.56
RBBP4-211ENST00000477563 LRP5O75197 1615 aa11.54□□□□□ -0.56
RBBP4-211ENST00000477563 ONECUT3O60422 494 aaPredicted RBP11.54□□□□□ -0.56
RBBP4-211ENST00000477563 SIRT1Q96EB6 747 aa11.54□□□□□ -0.56
RBBP4-211ENST00000477563 ADGRF5Q8IZF2 1346 aa11.54□□□□□ -0.56
RBBP4-211ENST00000477563 ANKRD30BQ9BXX2 1392 aa11.54□□□□□ -0.56
RBBP4-211ENST00000477563 PLCH1Q4KWH8 1693 aa11.53□□□□□ -0.56
RBBP4-211ENST00000477563 ABCA3Q99758 1704 aa11.53□□□□□ -0.56
RBBP4-211ENST00000477563 PIK3C2GO75747 1445 aa11.52□□□□□ -0.56
RBBP4-211ENST00000477563 WAPLQ7Z5K2 1190 aa11.52□□□□□ -0.57
RBBP4-211ENST00000477563 XPCQ01831 940 aaPredicted RBP11.51□□□□□ -0.57
RBBP4-211ENST00000477563 VPS72Q15906 364 aa11.51□□□□□ -0.57
RBBP4-211ENST00000477563 POTEHQ6S545 545 aa11.51□□□□□ -0.57
RBBP4-211ENST00000477563 PLEKHH1Q9ULM0 1364 aa11.51□□□□□ -0.57
RBBP4-211ENST00000477563 KRT28Q7Z3Y7 464 aa11.5□□□□□ -0.57
RBBP4-211ENST00000477563 SBNO1A3KN83 1393 aa11.5□□□□□ -0.57
RBBP4-211ENST00000477563 TNS3Q68CZ2 1445 aa11.5□□□□□ -0.57
RBBP4-211ENST00000477563 YTHDC2Q9H6S0 1430 aaKnown RBP11.5□□□□□ -0.57
RBBP4-211ENST00000477563 NRXN1Q9ULB1 1477 aa11.5□□□□□ -0.57
RBBP4-211ENST00000477563 NRAPQ86VF7 1730 aa11.49□□□□□ -0.57
RBBP4-211ENST00000477563 PPARGC1BQ86YN6 1023 aaKnown RBP11.49□□□□□ -0.57
RBBP4-211ENST00000477563 SEPT12Q8IYM1 358 aa11.48□□□□□ -0.57
RBBP4-211ENST00000477563 AKT1S1Q96B36 256 aa11.48□□□□□ -0.57
RBBP4-211ENST00000477563 STK26Q9P289 416 aa11.48□□□□□ -0.57
RBBP4-211ENST00000477563 TRPM3Q9HCF6 1732 aaPredicted RBP11.47□□□□□ -0.57
RBBP4-211ENST00000477563 NUTM2FA1L443 756 aa11.47□□□□□ -0.57
RBBP4-211ENST00000477563 PSME1Q06323 249 aa11.47□□□□□ -0.57
RBBP4-211ENST00000477563 TMEM132EQ6IEE7 984 aa11.47□□□□□ -0.57
RBBP4-211ENST00000477563 DEFB132Q7Z7B7 95 aa11.47□□□□□ -0.57
RBBP4-211ENST00000477563 ADGRB2O60241 1585 aa11.46□□□□□ -0.57
RBBP4-211ENST00000477563 ARHGEF10O15013 1369 aa11.46□□□□□ -0.57
RBBP4-211ENST00000477563 C14orf93Q9H972 538 aaKnown RBP11.46□□□□□ -0.57
RBBP4-211ENST00000477563 PHF8Q9UPP1 1060 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms