RNA–Protein interactions for RNA: ENST00000477561.5

HDAC6-221, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-221ENST00000477561 C1orf167Q5SNV9 1468 aa12.02□□□□□ -0.48
HDAC6-221ENST00000477561 SIN3AQ96ST3 1273 aa12.02□□□□□ -0.49
HDAC6-221ENST00000477561 JCADQ9P266 1359 aa12.02□□□□□ -0.49
HDAC6-221ENST00000477561 COL16A1Q07092 1604 aaPredicted RBP12.01□□□□□ -0.49
HDAC6-221ENST00000477561 MSH5O43196 834 aa12.01□□□□□ -0.49
HDAC6-221ENST00000477561 NEUROD1Q13562 356 aa12.01□□□□□ -0.49
HDAC6-221ENST00000477561 PRAM1Q96QH2 718 aa12.01□□□□□ -0.49
HDAC6-221ENST00000477561 TRAK1Q9UPV9 953 aa12.01□□□□□ -0.49
HDAC6-221ENST00000477561 AHDC1Q5TGY3 1603 aaPredicted RBP12□□□□□ -0.49
HDAC6-221ENST00000477561 ESCO1Q5FWF5 840 aa12□□□□□ -0.49
HDAC6-221ENST00000477561 POGKQ9P215 609 aa12□□□□□ -0.49
HDAC6-221ENST00000477561 SIRT1Q96EB6 747 aa11.99□□□□□ -0.49
HDAC6-221ENST00000477561 STAC3Q96MF2 364 aa11.99□□□□□ -0.49
HDAC6-221ENST00000477561 LAMC1P11047 1609 aa11.99□□□□□ -0.49
HDAC6-221ENST00000477561 KNDC1Q76NI1 1749 aa11.99□□□□□ -0.49
HDAC6-221ENST00000477561 NUTM2BA6NNL0 878 aaPredicted RBP11.98□□□□□ -0.49
HDAC6-221ENST00000477561 NUTM2EB1AL46 878 aaPredicted RBP11.98□□□□□ -0.49
HDAC6-221ENST00000477561 NUTM2AQ8IVF1 878 aaPredicted RBP11.98□□□□□ -0.49
HDAC6-221ENST00000477561 RGS17Q9UGC6 210 aaPredicted RBP11.98□□□□□ -0.49
HDAC6-221ENST00000477561 ADGRB1O14514 1584 aa11.97□□□□□ -0.49
HDAC6-221ENST00000477561 LRRC59Q96AG4 307 aaKnown RBP11.97□□□□□ -0.49
HDAC6-221ENST00000477561 CDC42BPGQ6DT37 1551 aa11.96□□□□□ -0.49
HDAC6-221ENST00000477561 FOXO3O43524 673 aa11.96□□□□□ -0.49
HDAC6-221ENST00000477561 XPCQ01831 940 aaPredicted RBP11.96□□□□□ -0.49
HDAC6-221ENST00000477561 MEX3CQ5U5Q3 659 aaKnown RBP11.96□□□□□ -0.49
HDAC6-221ENST00000477561 L3MBTL2Q969R5 705 aa11.96□□□□□ -0.49
HDAC6-221ENST00000477561 HIRIP3Q9BW71 556 aaPredicted RBP11.96□□□□□ -0.49
HDAC6-221ENST00000477561 NHSL1Q5SYE7 1610 aa11.96□□□□□ -0.5
HDAC6-221ENST00000477561 SPATA31A6Q5VVP1 1343 aa11.95□□□□□ -0.5
HDAC6-221ENST00000477561 MINK1Q8N4C8 1332 aaPredicted RBP11.95□□□□□ -0.5
HDAC6-221ENST00000477561 NBPF1Q3BBV0 1214 aa11.95□□□□□ -0.5
HDAC6-221ENST00000477561 LRP6O75581 1613 aa11.94□□□□□ -0.5
HDAC6-221ENST00000477561 SOS2Q07890 1332 aaPredicted RBP11.94□□□□□ -0.5
HDAC6-221ENST00000477561 DLC1Q96QB1 1528 aa11.94□□□□□ -0.5
HDAC6-221ENST00000477561 POTEAQ6S8J7 498 aa11.93□□□□□ -0.5
HDAC6-221ENST00000477561 SHPRHQ149N8 1683 aa11.93□□□□□ -0.5
HDAC6-221ENST00000477561 PNPLA6Q8IY17 1366 aa11.92□□□□□ -0.5
HDAC6-221ENST00000477561 NPHP3Q7Z494 1330 aa11.92□□□□□ -0.5
HDAC6-221ENST00000477561 FMN2Q9NZ56 1722 aa11.92□□□□□ -0.5
HDAC6-221ENST00000477561 SOCS7O14512 581 aa11.92□□□□□ -0.5
HDAC6-221ENST00000477561 PMFBP1Q8TBY8 1022 aa11.91□□□□□ -0.5
HDAC6-221ENST00000477561 PHF8Q9UPP1 1060 aa11.91□□□□□ -0.5
HDAC6-221ENST00000477561 WASLO00401 505 aaPredicted RBP11.9□□□□□ -0.5
HDAC6-221ENST00000477561 ADAMTS2O95450 1211 aa11.9□□□□□ -0.5
HDAC6-221ENST00000477561 KRT28Q7Z3Y7 464 aa11.89□□□□□ -0.51
HDAC6-221ENST00000477561 PXDNQ92626 1479 aa11.89□□□□□ -0.51
HDAC6-221ENST00000477561 RGPD8O14715 1765 aaPredicted RBP11.88□□□□□ -0.51
HDAC6-221ENST00000477561 PLEKHG5O94827 1062 aa11.88□□□□□ -0.51
HDAC6-221ENST00000477561 C8orf37Q96NL8 207 aa11.88□□□□□ -0.51
HDAC6-221ENST00000477561 PRR36Q9H6K5 1346 aa11.87□□□□□ -0.51
HDAC6-221ENST00000477561 ARHGEF28Q8N1W1 1705 aaKnown RBP11.87□□□□□ -0.51
HDAC6-221ENST00000477561 KIAA1210Q9ULL0 1709 aa11.87□□□□□ -0.51
HDAC6-221ENST00000477561 PSME1Q06323 249 aa11.87□□□□□ -0.51
HDAC6-221ENST00000477561 NBPF8Q3BBV2 869 aa11.87□□□□□ -0.51
HDAC6-221ENST00000477561 AFF2P51816 1311 aa11.86□□□□□ -0.51
HDAC6-221ENST00000477561 USP32Q8NFA0 1604 aa11.86□□□□□ -0.51
HDAC6-221ENST00000477561 ZNF772Q68DY9 489 aaPredicted RBP11.86□□□□□ -0.51
HDAC6-221ENST00000477561 LMOD2Q6P5Q4 547 aa11.86□□□□□ -0.51
HDAC6-221ENST00000477561 CDK19Q9BWU1 502 aa11.86□□□□□ -0.51
HDAC6-221ENST00000477561 ADGRB2O60241 1585 aa11.86□□□□□ -0.51
HDAC6-221ENST00000477561 ANKARQ7Z5J8 1434 aa11.86□□□□□ -0.51
HDAC6-221ENST00000477561 SPATA31A3Q5VYP0 1347 aa11.86□□□□□ -0.51
HDAC6-221ENST00000477561 KIF1AQ12756 1690 aa11.85□□□□□ -0.51
HDAC6-221ENST00000477561 NUDT16Q96DE0 195 aaKnown RBP11.85□□□□□ -0.51
HDAC6-221ENST00000477561 NGLY1Q96IV0 654 aa11.85□□□□□ -0.51
HDAC6-221ENST00000477561 TONSLQ96HA7 1378 aa11.84□□□□□ -0.51
HDAC6-221ENST00000477561 NGDNQ8NEJ9 315 aaKnown RBP11.84□□□□□ -0.51
HDAC6-221ENST00000477561 TULP4Q9NRJ4 1543 aa11.84□□□□□ -0.51
HDAC6-221ENST00000477561 CENPJQ9HC77 1338 aaPredicted RBP11.84□□□□□ -0.51
HDAC6-221ENST00000477561 ROCK2O75116 1388 aaKnown RBP11.83□□□□□ -0.52
HDAC6-221ENST00000477561 EIF3AQ14152 1382 aaKnown RBP11.83□□□□□ -0.52
HDAC6-221ENST00000477561 CABLES1Q8TDN4 633 aa11.83□□□□□ -0.52
HDAC6-221ENST00000477561 TRPM1Q7Z4N2 1603 aa11.82□□□□□ -0.52
HDAC6-221ENST00000477561 SRPK2P78362 688 aaKnown RBP11.82□□□□□ -0.52
HDAC6-221ENST00000477561 CABP2Q9NPB3 220 aa11.82□□□□□ -0.52
HDAC6-221ENST00000477561 TNS3Q68CZ2 1445 aa11.81□□□□□ -0.52
HDAC6-221ENST00000477561 PAK3O75914 559 aaPredicted RBP11.81□□□□□ -0.52
HDAC6-221ENST00000477561 HAP1P54257 671 aaPredicted RBP11.81□□□□□ -0.52
HDAC6-221ENST00000477561 QTRT2Q9H974 415 aaKnown RBP11.81□□□□□ -0.52
HDAC6-221ENST00000477561 COL22A1Q8NFW1 1626 aaPredicted RBP11.81□□□□□ -0.52
HDAC6-221ENST00000477561 GPRASP1Q5JY77 1395 aa11.8□□□□□ -0.52
HDAC6-221ENST00000477561 RXRBP28702 533 aa11.8□□□□□ -0.52
HDAC6-221ENST00000477561 USP21Q9UK80 565 aa11.8□□□□□ -0.52
HDAC6-221ENST00000477561 ATP7BP35670 1465 aa11.8□□□□□ -0.52
HDAC6-221ENST00000477561 SBNO1A3KN83 1393 aa11.79□□□□□ -0.52
HDAC6-221ENST00000477561 CARD11Q9BXL7 1154 aa11.79□□□□□ -0.52
HDAC6-221ENST00000477561 CCDC61Q9Y6R9 512 aa11.79□□□□□ -0.52
HDAC6-221ENST00000477561 FNBP4Q8N3X1 1017 aaPredicted RBP11.78□□□□□ -0.52
HDAC6-221ENST00000477561 ACEP12821 1306 aa11.78□□□□□ -0.52
HDAC6-221ENST00000477561 QRICH2Q9H0J4 1663 aa11.78□□□□□ -0.52
HDAC6-221ENST00000477561 ARHGEF10O15013 1369 aa11.77□□□□□ -0.53
HDAC6-221ENST00000477561 PLEKHG3A1L390 1219 aa11.76□□□□□ -0.53
HDAC6-221ENST00000477561 RBM6P78332 1123 aaKnown RBP11.76□□□□□ -0.53
HDAC6-221ENST00000477561 NUTM2GQ5VZR2 741 aa11.76□□□□□ -0.53
HDAC6-221ENST00000477561 CABP1Q9NZU7 370 aa11.76□□□□□ -0.53
HDAC6-221ENST00000477561 PPIP5K1Q6PFW1 1433 aa11.76□□□□□ -0.53
HDAC6-221ENST00000477561 ITSN1Q15811 1721 aa11.75□□□□□ -0.53
HDAC6-221ENST00000477561 TRPM3Q9HCF6 1732 aaPredicted RBP11.75□□□□□ -0.53
HDAC6-221ENST00000477561 TRPC5Q9UL62 973 aaPredicted RBP11.75□□□□□ -0.53
HDAC6-221ENST00000477561 EVC2Q86UK5 1308 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 206.9 ms