RNA–Protein interactions for RNA: ENST00000477529.1

SRRT-210, Transcript of serrate, RNA effector molecule, humanhuman

TSL 2

Gene SRRT, Length 540 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-210ENST00000477529 CFAP70Q5T0N1 1121 aa20.52■□□□□ 0.88
SRRT-210ENST00000477529 CADPS2Q86UW7 1296 aa20.51■□□□□ 0.87
SRRT-210ENST00000477529 MARF1Q9Y4F3 1742 aaKnown RBP20.5■□□□□ 0.87
SRRT-210ENST00000477529 PLEKHH1Q9ULM0 1364 aa20.49■□□□□ 0.87
SRRT-210ENST00000477529 ATF3P18847 181 aa20.49■□□□□ 0.87
SRRT-210ENST00000477529 STAC3Q96MF2 364 aa20.49■□□□□ 0.87
SRRT-210ENST00000477529 SLAIN2Q9P270 581 aa20.49■□□□□ 0.87
SRRT-210ENST00000477529 KDM2AQ9Y2K7 1162 aa20.49■□□□□ 0.87
SRRT-210ENST00000477529 SIN3AQ96ST3 1273 aa20.47■□□□□ 0.87
SRRT-210ENST00000477529 STK26Q9P289 416 aa20.47■□□□□ 0.87
SRRT-210ENST00000477529 TOPAZ1Q8N9V7 1692 aa20.47■□□□□ 0.87
SRRT-210ENST00000477529 C1orf167Q5SNV9 1468 aa20.45■□□□□ 0.86
SRRT-210ENST00000477529 ABCA3Q99758 1704 aa20.43■□□□□ 0.86
SRRT-210ENST00000477529 WAPLQ7Z5K2 1190 aa20.42■□□□□ 0.86
SRRT-210ENST00000477529 COL22A1Q8NFW1 1626 aaPredicted RBP20.41■□□□□ 0.86
SRRT-210ENST00000477529 BRINP3Q76B58 766 aa20.4■□□□□ 0.86
SRRT-210ENST00000477529 TRPM3Q9HCF6 1732 aaPredicted RBP20.39■□□□□ 0.86
SRRT-210ENST00000477529 L3MBTL2Q969R5 705 aa20.39■□□□□ 0.85
SRRT-210ENST00000477529 SIRT1Q96EB6 747 aa20.39■□□□□ 0.85
SRRT-210ENST00000477529 NEUROD1Q13562 356 aa20.38■□□□□ 0.85
SRRT-210ENST00000477529 TULP4Q9NRJ4 1543 aa20.36■□□□□ 0.85
SRRT-210ENST00000477529 PRAM1Q96QH2 718 aa20.35■□□□□ 0.85
SRRT-210ENST00000477529 TRAK1Q9UPV9 953 aa20.35■□□□□ 0.85
SRRT-210ENST00000477529 CRYBG1Q9Y4K1 1723 aa20.34■□□□□ 0.85
SRRT-210ENST00000477529 PCGF6Q9BYE7 350 aa20.34■□□□□ 0.85
SRRT-210ENST00000477529 ALS2Q96Q42 1657 aa20.34■□□□□ 0.85
SRRT-210ENST00000477529 AKAP12Q02952 1782 aa20.34■□□□□ 0.85
SRRT-210ENST00000477529 PXDNQ92626 1479 aa20.33■□□□□ 0.85
SRRT-210ENST00000477529 JCADQ9P266 1359 aa20.32■□□□□ 0.84
SRRT-210ENST00000477529 RALGAPBQ86X10 1494 aa20.31■□□□□ 0.84
SRRT-210ENST00000477529 SAFB2Q14151 953 aaKnown RBP eCLIP20.31■□□□□ 0.84
SRRT-210ENST00000477529 NBPF1Q3BBV0 1214 aa20.31■□□□□ 0.84
SRRT-210ENST00000477529 TONSLQ96HA7 1378 aa20.31■□□□□ 0.84
SRRT-210ENST00000477529 DISP3Q9P2K9 1392 aa20.31■□□□□ 0.84
SRRT-210ENST00000477529 LRP6O75581 1613 aa20.31■□□□□ 0.84
SRRT-210ENST00000477529 ANKARQ7Z5J8 1434 aa20.29■□□□□ 0.84
SRRT-210ENST00000477529 ORAI2Q96SN7 254 aa20.29■□□□□ 0.84
SRRT-210ENST00000477529 POGKQ9P215 609 aa20.29■□□□□ 0.84
SRRT-210ENST00000477529 ATP7BP35670 1465 aa20.29■□□□□ 0.84
SRRT-210ENST00000477529 DDX17Q92841 729 aaKnown RBP20.28■□□□□ 0.84
SRRT-210ENST00000477529 NUTM2FA1L443 756 aa20.26■□□□□ 0.83
SRRT-210ENST00000477529 MINK1Q8N4C8 1332 aaPredicted RBP20.26■□□□□ 0.83
SRRT-210ENST00000477529 GPRASP1Q5JY77 1395 aa20.25■□□□□ 0.83
SRRT-210ENST00000477529 ROCK2O75116 1388 aaKnown RBP20.24■□□□□ 0.83
SRRT-210ENST00000477529 NBPF8Q3BBV2 869 aa20.24■□□□□ 0.83
SRRT-210ENST00000477529 HIRIP3Q9BW71 556 aaPredicted RBP20.24■□□□□ 0.83
SRRT-210ENST00000477529 SOS2Q07890 1332 aaPredicted RBP20.24■□□□□ 0.83
SRRT-210ENST00000477529 EIF3AQ14152 1382 aaKnown RBP20.23■□□□□ 0.83
SRRT-210ENST00000477529 ESCO1Q5FWF5 840 aa20.23■□□□□ 0.83
SRRT-210ENST00000477529 MON2Q7Z3U7 1717 aa20.23■□□□□ 0.83
SRRT-210ENST00000477529 PLCH1Q4KWH8 1693 aa20.22■□□□□ 0.83
SRRT-210ENST00000477529 PNPLA6Q8IY17 1366 aa20.22■□□□□ 0.83
SRRT-210ENST00000477529 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.22■□□□□ 0.83
SRRT-210ENST00000477529 PHRF1Q9P1Y6 1649 aaKnown RBP20.22■□□□□ 0.83
SRRT-210ENST00000477529 NPHP3Q7Z494 1330 aa20.21■□□□□ 0.83
SRRT-210ENST00000477529 SPATA31A6Q5VVP1 1343 aa20.2■□□□□ 0.82
SRRT-210ENST00000477529 PRR36Q9H6K5 1346 aa20.2■□□□□ 0.82
SRRT-210ENST00000477529 CLSPNQ9HAW4 1339 aa20.19■□□□□ 0.82
SRRT-210ENST00000477529 NRKQ7Z2Y5 1582 aa20.18■□□□□ 0.82
SRRT-210ENST00000477529 WASLO00401 505 aaPredicted RBP20.18■□□□□ 0.82
SRRT-210ENST00000477529 CENPJQ9HC77 1338 aaPredicted RBP20.18■□□□□ 0.82
SRRT-210ENST00000477529 NWD2Q9ULI1 1742 aa20.18■□□□□ 0.82
SRRT-210ENST00000477529 LRRC59Q96AG4 307 aaKnown RBP20.17■□□□□ 0.82
SRRT-210ENST00000477529 FOXO3O43524 673 aa20.16■□□□□ 0.82
SRRT-210ENST00000477529 PHF8Q9UPP1 1060 aa20.15■□□□□ 0.82
SRRT-210ENST00000477529 TNS3Q68CZ2 1445 aa20.15■□□□□ 0.82
SRRT-210ENST00000477529 XPCQ01831 940 aaPredicted RBP20.14■□□□□ 0.81
SRRT-210ENST00000477529 NRAPQ86VF7 1730 aa20.13■□□□□ 0.81
SRRT-210ENST00000477529 PHF23Q9BUL5 403 aaPredicted RBP20.12■□□□□ 0.81
SRRT-210ENST00000477529 PIK3C2AO00443 1686 aa20.12■□□□□ 0.81
SRRT-210ENST00000477529 RGPD5Q99666 1765 aa20.11■□□□□ 0.81
SRRT-210ENST00000477529 SBNO2Q9Y2G9 1366 aa20.1■□□□□ 0.81
SRRT-210ENST00000477529 MYOM1P52179 1685 aa20.1■□□□□ 0.81
SRRT-210ENST00000477529 ILDR2Q71H61 639 aa20.1■□□□□ 0.81
SRRT-210ENST00000477529 CDK19Q9BWU1 502 aa20.1■□□□□ 0.81
SRRT-210ENST00000477529 USP54Q70EL1 1684 aa20.1■□□□□ 0.81
SRRT-210ENST00000477529 PMFBP1Q8TBY8 1022 aa20.09■□□□□ 0.81
SRRT-210ENST00000477529 RGS17Q9UGC6 210 aaPredicted RBP20.09■□□□□ 0.81
SRRT-210ENST00000477529 SBNO1A3KN83 1393 aa20.08■□□□□ 0.81
SRRT-210ENST00000477529 SPATA31A3Q5VYP0 1347 aa20.08■□□□□ 0.81
SRRT-210ENST00000477529 NUDT16Q96DE0 195 aaKnown RBP20.08■□□□□ 0.81
SRRT-210ENST00000477529 PPIP5K1Q6PFW1 1433 aa20.08■□□□□ 0.8
SRRT-210ENST00000477529 COL14A1Q05707 1796 aaKnown RBP20.08■□□□□ 0.8
SRRT-210ENST00000477529 BRWD3Q6RI45 1802 aa20.07■□□□□ 0.8
SRRT-210ENST00000477529 CARD11Q9BXL7 1154 aa20.07■□□□□ 0.8
SRRT-210ENST00000477529 POLR3AO14802 1390 aaPredicted RBP20.07■□□□□ 0.8
SRRT-210ENST00000477529 LTN1O94822 1766 aa20.06■□□□□ 0.8
SRRT-210ENST00000477529 NUTM2BA6NNL0 878 aaPredicted RBP20.06■□□□□ 0.8
SRRT-210ENST00000477529 NUTM2EB1AL46 878 aaPredicted RBP20.06■□□□□ 0.8
SRRT-210ENST00000477529 KRT28Q7Z3Y7 464 aa20.06■□□□□ 0.8
SRRT-210ENST00000477529 NUTM2AQ8IVF1 878 aaPredicted RBP20.06■□□□□ 0.8
SRRT-210ENST00000477529 KIF20BQ96Q89 1820 aa20.05■□□□□ 0.8
SRRT-210ENST00000477529 CCER1Q8TC90 406 aaPredicted RBP20.05■□□□□ 0.8
SRRT-210ENST00000477529 MEX3CQ5U5Q3 659 aaKnown RBP20.03■□□□□ 0.8
SRRT-210ENST00000477529 ARHGEF10O15013 1369 aa20.03■□□□□ 0.8
SRRT-210ENST00000477529 SRPK2P78362 688 aaKnown RBP20.02■□□□□ 0.8
SRRT-210ENST00000477529 CABP2Q9NPB3 220 aa20.02■□□□□ 0.8
SRRT-210ENST00000477529 TIMELESSQ9UNS1 1208 aa20.02■□□□□ 0.8
SRRT-210ENST00000477529 EVC2Q86UK5 1308 aa20.02■□□□□ 0.79
SRRT-210ENST00000477529 PSME1Q06323 249 aa20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms