RNA–Protein interactions for RNA: ENST00000476905.6

SSX2IP-206, Transcript of SSX family member 2 interacting protein, humanhuman

TSL 2

Gene SSX2IP, Length 2,272 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-206ENST00000476905 NEUROD1Q13562 356 aa13.1□□□□□ -0.31
SSX2IP-206ENST00000476905 ADGRB1O14514 1584 aa13.1□□□□□ -0.31
SSX2IP-206ENST00000476905 ADGRL3Q9HAR2 1447 aa13.1□□□□□ -0.31
SSX2IP-206ENST00000476905 CADPS2Q86UW7 1296 aa13.09□□□□□ -0.31
SSX2IP-206ENST00000476905 NBPF1Q3BBV0 1214 aa13.09□□□□□ -0.31
SSX2IP-206ENST00000476905 MST1RQ04912 1400 aa13.08□□□□□ -0.32
SSX2IP-206ENST00000476905 ATF3P18847 181 aa13.08□□□□□ -0.32
SSX2IP-206ENST00000476905 BRINP3Q76B58 766 aa13.08□□□□□ -0.32
SSX2IP-206ENST00000476905 STAC3Q96MF2 364 aa13.08□□□□□ -0.32
SSX2IP-206ENST00000476905 NALCNQ8IZF0 1738 aa13.07□□□□□ -0.32
SSX2IP-206ENST00000476905 SIRT1Q96EB6 747 aa13.06□□□□□ -0.32
SSX2IP-206ENST00000476905 DCCP43146 1447 aa13.06□□□□□ -0.32
SSX2IP-206ENST00000476905 ROBO1Q9Y6N7 1651 aa13.06□□□□□ -0.32
SSX2IP-206ENST00000476905 DDX17Q92841 729 aaKnown RBP13.06□□□□□ -0.32
SSX2IP-206ENST00000476905 TRAK1Q9UPV9 953 aa13.06□□□□□ -0.32
SSX2IP-206ENST00000476905 PLCB2Q00722 1185 aa13.05□□□□□ -0.32
SSX2IP-206ENST00000476905 PRAM1Q96QH2 718 aa13.05□□□□□ -0.32
SSX2IP-206ENST00000476905 ORAI2Q96SN7 254 aa13.05□□□□□ -0.32
SSX2IP-206ENST00000476905 SAFB2Q14151 953 aaKnown RBP eCLIP13.04□□□□□ -0.32
SSX2IP-206ENST00000476905 NBPF8Q3BBV2 869 aa13.04□□□□□ -0.32
SSX2IP-206ENST00000476905 C1orf167Q5SNV9 1468 aa13.04□□□□□ -0.32
SSX2IP-206ENST00000476905 RNF216Q9NWF9 866 aaPredicted RBP13.04□□□□□ -0.32
SSX2IP-206ENST00000476905 NUTM2FA1L443 756 aa13.02□□□□□ -0.32
SSX2IP-206ENST00000476905 KNDC1Q76NI1 1749 aa13.02□□□□□ -0.33
SSX2IP-206ENST00000476905 LAMC1P11047 1609 aa13.01□□□□□ -0.33
SSX2IP-206ENST00000476905 DLC1Q96QB1 1528 aa13□□□□□ -0.33
SSX2IP-206ENST00000476905 HIRIP3Q9BW71 556 aaPredicted RBP12.99□□□□□ -0.33
SSX2IP-206ENST00000476905 CDC42BPGQ6DT37 1551 aa12.98□□□□□ -0.33
SSX2IP-206ENST00000476905 POGKQ9P215 609 aa12.98□□□□□ -0.33
SSX2IP-206ENST00000476905 COL16A1Q07092 1604 aaPredicted RBP12.98□□□□□ -0.33
SSX2IP-206ENST00000476905 MINK1Q8N4C8 1332 aaPredicted RBP12.98□□□□□ -0.33
SSX2IP-206ENST00000476905 AHDC1Q5TGY3 1603 aaPredicted RBP12.97□□□□□ -0.33
SSX2IP-206ENST00000476905 PRR36Q9H6K5 1346 aa12.96□□□□□ -0.33
SSX2IP-206ENST00000476905 ESCO1Q5FWF5 840 aa12.96□□□□□ -0.34
SSX2IP-206ENST00000476905 DISP3Q9P2K9 1392 aa12.95□□□□□ -0.34
SSX2IP-206ENST00000476905 FOXO3O43524 673 aa12.95□□□□□ -0.34
SSX2IP-206ENST00000476905 RGS17Q9UGC6 210 aaPredicted RBP12.95□□□□□ -0.34
SSX2IP-206ENST00000476905 PHLPP1O60346 1717 aa12.94□□□□□ -0.34
SSX2IP-206ENST00000476905 SOS2Q07890 1332 aaPredicted RBP12.94□□□□□ -0.34
SSX2IP-206ENST00000476905 KIAA1210Q9ULL0 1709 aa12.94□□□□□ -0.34
SSX2IP-206ENST00000476905 XPCQ01831 940 aaPredicted RBP12.94□□□□□ -0.34
SSX2IP-206ENST00000476905 ILDR2Q71H61 639 aa12.94□□□□□ -0.34
SSX2IP-206ENST00000476905 MED1Q15648 1581 aaPredicted RBP12.93□□□□□ -0.34
SSX2IP-206ENST00000476905 WASLO00401 505 aaPredicted RBP12.93□□□□□ -0.34
SSX2IP-206ENST00000476905 ARHGEF28Q8N1W1 1705 aaKnown RBP12.93□□□□□ -0.34
SSX2IP-206ENST00000476905 NHSL1Q5SYE7 1610 aa12.93□□□□□ -0.34
SSX2IP-206ENST00000476905 JCADQ9P266 1359 aa12.92□□□□□ -0.34
SSX2IP-206ENST00000476905 FMN2Q9NZ56 1722 aa12.92□□□□□ -0.34
SSX2IP-206ENST00000476905 TRPM1Q7Z4N2 1603 aa12.92□□□□□ -0.34
SSX2IP-206ENST00000476905 TONSLQ96HA7 1378 aa12.92□□□□□ -0.34
SSX2IP-206ENST00000476905 USP32Q8NFA0 1604 aa12.91□□□□□ -0.34
SSX2IP-206ENST00000476905 GPRASP1Q5JY77 1395 aa12.91□□□□□ -0.34
SSX2IP-206ENST00000476905 ATXN8OSP0DMR3 200 aa12.91□□□□□ -0.34
SSX2IP-206ENST00000476905 ADGRB2O60241 1585 aa12.91□□□□□ -0.34
SSX2IP-206ENST00000476905 LRP6O75581 1613 aa12.91□□□□□ -0.34
SSX2IP-206ENST00000476905 PMFBP1Q8TBY8 1022 aa12.9□□□□□ -0.34
SSX2IP-206ENST00000476905 CDK19Q9BWU1 502 aa12.9□□□□□ -0.34
SSX2IP-206ENST00000476905 PXDNQ92626 1479 aa12.9□□□□□ -0.34
SSX2IP-206ENST00000476905 ROCK2O75116 1388 aaKnown RBP12.9□□□□□ -0.34
SSX2IP-206ENST00000476905 LRRC59Q96AG4 307 aaKnown RBP12.9□□□□□ -0.35
SSX2IP-206ENST00000476905 PHF8Q9UPP1 1060 aa12.9□□□□□ -0.35
SSX2IP-206ENST00000476905 PNPLA6Q8IY17 1366 aa12.89□□□□□ -0.35
SSX2IP-206ENST00000476905 RGPD8O14715 1765 aaPredicted RBP12.89□□□□□ -0.35
SSX2IP-206ENST00000476905 CENPJQ9HC77 1338 aaPredicted RBP12.88□□□□□ -0.35
SSX2IP-206ENST00000476905 HAP1P54257 671 aaPredicted RBP12.87□□□□□ -0.35
SSX2IP-206ENST00000476905 NUDT16Q96DE0 195 aaKnown RBP12.87□□□□□ -0.35
SSX2IP-206ENST00000476905 TAOK2Q9UL54 1235 aa12.87□□□□□ -0.35
SSX2IP-206ENST00000476905 NPHP3Q7Z494 1330 aa12.87□□□□□ -0.35
SSX2IP-206ENST00000476905 ANKARQ7Z5J8 1434 aa12.87□□□□□ -0.35
SSX2IP-206ENST00000476905 MYCNP04198 464 aaPredicted RBP12.87□□□□□ -0.35
SSX2IP-206ENST00000476905 KRT28Q7Z3Y7 464 aa12.87□□□□□ -0.35
SSX2IP-206ENST00000476905 ATP7BP35670 1465 aa12.86□□□□□ -0.35
SSX2IP-206ENST00000476905 RALGAPBQ86X10 1494 aa12.86□□□□□ -0.35
SSX2IP-206ENST00000476905 CLSPNQ9HAW4 1339 aa12.86□□□□□ -0.35
SSX2IP-206ENST00000476905 TULP4Q9NRJ4 1543 aa12.86□□□□□ -0.35
SSX2IP-206ENST00000476905 SPATA31A6Q5VVP1 1343 aa12.86□□□□□ -0.35
SSX2IP-206ENST00000476905 NUTM2BA6NNL0 878 aaPredicted RBP12.86□□□□□ -0.35
SSX2IP-206ENST00000476905 NUTM2EB1AL46 878 aaPredicted RBP12.86□□□□□ -0.35
SSX2IP-206ENST00000476905 NUTM2AQ8IVF1 878 aaPredicted RBP12.86□□□□□ -0.35
SSX2IP-206ENST00000476905 CARD11Q9BXL7 1154 aa12.86□□□□□ -0.35
SSX2IP-206ENST00000476905 CABP2Q9NPB3 220 aa12.86□□□□□ -0.35
SSX2IP-206ENST00000476905 SPATA31A3Q5VYP0 1347 aa12.85□□□□□ -0.35
SSX2IP-206ENST00000476905 POTEAQ6S8J7 498 aa12.85□□□□□ -0.35
SSX2IP-206ENST00000476905 CCER1Q8TC90 406 aaPredicted RBP12.85□□□□□ -0.35
SSX2IP-206ENST00000476905 SHPRHQ149N8 1683 aa12.85□□□□□ -0.35
SSX2IP-206ENST00000476905 ATF5Q9Y2D1 282 aaPredicted RBP12.83□□□□□ -0.35
SSX2IP-206ENST00000476905 CCDC61Q9Y6R9 512 aa12.82□□□□□ -0.36
SSX2IP-206ENST00000476905 PLEKHG3A1L390 1219 aa12.82□□□□□ -0.36
SSX2IP-206ENST00000476905 PSME1Q06323 249 aa12.82□□□□□ -0.36
SSX2IP-206ENST00000476905 CABLES1Q8TDN4 633 aa12.81□□□□□ -0.36
SSX2IP-206ENST00000476905 TESK2Q96S53 571 aa12.81□□□□□ -0.36
SSX2IP-206ENST00000476905 TIMELESSQ9UNS1 1208 aa12.81□□□□□ -0.36
SSX2IP-206ENST00000476905 ACEP12821 1306 aa12.8□□□□□ -0.36
SSX2IP-206ENST00000476905 ADAMTS2O95450 1211 aa12.8□□□□□ -0.36
SSX2IP-206ENST00000476905 SRPK2P78362 688 aaKnown RBP12.8□□□□□ -0.36
SSX2IP-206ENST00000476905 KIF1AQ12756 1690 aa12.8□□□□□ -0.36
SSX2IP-206ENST00000476905 QRICH2Q9H0J4 1663 aa12.8□□□□□ -0.36
SSX2IP-206ENST00000476905 ST20-MTHFSA0A0A6YYL1 179 aa12.79□□□□□ -0.36
SSX2IP-206ENST00000476905 CABP1Q9NZU7 370 aa12.79□□□□□ -0.36
SSX2IP-206ENST00000476905 SBNO1A3KN83 1393 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 119.7 ms