RNA–Protein interactions for RNA: ENST00000476858.5

APTX-220, Transcript of aprataxin, humanhuman

TSL 1 (best) BASIC

Gene APTX, Length 1,068 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-220ENST00000476858 C19orf44Q9H6X5 657 aa18.07■□□□□ 0.48
APTX-220ENST00000476858 ABCC11Q96J66 1382 aa18.06■□□□□ 0.48
APTX-220ENST00000476858 NBPF1Q3BBV0 1214 aa18.06■□□□□ 0.48
APTX-220ENST00000476858 SLAIN2Q9P270 581 aa18.06■□□□□ 0.48
APTX-220ENST00000476858 MST1RQ04912 1400 aa18.04■□□□□ 0.48
APTX-220ENST00000476858 SAFB2Q14151 953 aaKnown RBP eCLIP18.03■□□□□ 0.48
APTX-220ENST00000476858 FAM135BQ49AJ0 1406 aa18.03■□□□□ 0.48
APTX-220ENST00000476858 NBPF8Q3BBV2 869 aa18.02■□□□□ 0.48
APTX-220ENST00000476858 TRAK1Q9UPV9 953 aa18.02■□□□□ 0.48
APTX-220ENST00000476858 ATF3P18847 181 aa18.01■□□□□ 0.47
APTX-220ENST00000476858 PRAM1Q96QH2 718 aa18.01■□□□□ 0.47
APTX-220ENST00000476858 DDX17Q92841 729 aaKnown RBP18■□□□□ 0.47
APTX-220ENST00000476858 DCCP43146 1447 aa17.99■□□□□ 0.47
APTX-220ENST00000476858 CADPS2Q86UW7 1296 aa17.99■□□□□ 0.47
APTX-220ENST00000476858 NUTM2FA1L443 756 aa17.98■□□□□ 0.47
APTX-220ENST00000476858 BRINP3Q76B58 766 aa17.98■□□□□ 0.47
APTX-220ENST00000476858 DLC1Q96QB1 1528 aa17.98■□□□□ 0.47
APTX-220ENST00000476858 C1orf167Q5SNV9 1468 aa17.97■□□□□ 0.47
APTX-220ENST00000476858 STAC3Q96MF2 364 aa17.97■□□□□ 0.47
APTX-220ENST00000476858 ARHGEF28Q8N1W1 1705 aaKnown RBP17.97■□□□□ 0.47
APTX-220ENST00000476858 KIAA1210Q9ULL0 1709 aa17.97■□□□□ 0.47
APTX-220ENST00000476858 TRPM1Q7Z4N2 1603 aa17.97■□□□□ 0.47
APTX-220ENST00000476858 CDC42BPGQ6DT37 1551 aa17.96■□□□□ 0.47
APTX-220ENST00000476858 NCBP3Q53F19 620 aaKnown RBP17.96■□□□□ 0.47
APTX-220ENST00000476858 ORAI2Q96SN7 254 aa17.96■□□□□ 0.47
APTX-220ENST00000476858 SIRT1Q96EB6 747 aa17.95■□□□□ 0.46
APTX-220ENST00000476858 HIRIP3Q9BW71 556 aaPredicted RBP17.95■□□□□ 0.46
APTX-220ENST00000476858 COL16A1Q07092 1604 aaPredicted RBP17.94■□□□□ 0.46
APTX-220ENST00000476858 PHLPP1O60346 1717 aa17.93■□□□□ 0.46
APTX-220ENST00000476858 FMN2Q9NZ56 1722 aa17.93■□□□□ 0.46
APTX-220ENST00000476858 MINK1Q8N4C8 1332 aaPredicted RBP17.93■□□□□ 0.46
APTX-220ENST00000476858 TONSLQ96HA7 1378 aa17.92■□□□□ 0.46
APTX-220ENST00000476858 POGKQ9P215 609 aa17.92■□□□□ 0.46
APTX-220ENST00000476858 AHDC1Q5TGY3 1603 aaPredicted RBP17.91■□□□□ 0.46
APTX-220ENST00000476858 USP32Q8NFA0 1604 aa17.9■□□□□ 0.46
APTX-220ENST00000476858 NHSL1Q5SYE7 1610 aa17.9■□□□□ 0.46
APTX-220ENST00000476858 RGPD8O14715 1765 aaPredicted RBP17.89■□□□□ 0.45
APTX-220ENST00000476858 ADGRB2O60241 1585 aa17.88■□□□□ 0.45
APTX-220ENST00000476858 PRR36Q9H6K5 1346 aa17.88■□□□□ 0.45
APTX-220ENST00000476858 XPCQ01831 940 aaPredicted RBP17.86■□□□□ 0.45
APTX-220ENST00000476858 ESCO1Q5FWF5 840 aa17.86■□□□□ 0.45
APTX-220ENST00000476858 ROCK2O75116 1388 aaKnown RBP17.86■□□□□ 0.45
APTX-220ENST00000476858 MED1Q15648 1581 aaPredicted RBP17.85■□□□□ 0.45
APTX-220ENST00000476858 CCER1Q8TC90 406 aaPredicted RBP17.85■□□□□ 0.45
APTX-220ENST00000476858 RALGAPBQ86X10 1494 aa17.83■□□□□ 0.45
APTX-220ENST00000476858 GPRASP1Q5JY77 1395 aa17.83■□□□□ 0.45
APTX-220ENST00000476858 WASLO00401 505 aaPredicted RBP17.82■□□□□ 0.44
APTX-220ENST00000476858 FOXO3O43524 673 aa17.82■□□□□ 0.44
APTX-220ENST00000476858 QRICH2Q9H0J4 1663 aa17.82■□□□□ 0.44
APTX-220ENST00000476858 PXDNQ92626 1479 aa17.81■□□□□ 0.44
APTX-220ENST00000476858 LRP6O75581 1613 aa17.8■□□□□ 0.44
APTX-220ENST00000476858 CENPJQ9HC77 1338 aaPredicted RBP17.8■□□□□ 0.44
APTX-220ENST00000476858 PMFBP1Q8TBY8 1022 aa17.8■□□□□ 0.44
APTX-220ENST00000476858 TULP4Q9NRJ4 1543 aa17.8■□□□□ 0.44
APTX-220ENST00000476858 SOS2Q07890 1332 aaPredicted RBP17.79■□□□□ 0.44
APTX-220ENST00000476858 CDK19Q9BWU1 502 aa17.79■□□□□ 0.44
APTX-220ENST00000476858 ATP7BP35670 1465 aa17.79■□□□□ 0.44
APTX-220ENST00000476858 CLSPNQ9HAW4 1339 aa17.78■□□□□ 0.44
APTX-220ENST00000476858 NPM3O75607 178 aaKnown RBP17.78■□□□□ 0.44
APTX-220ENST00000476858 JCADQ9P266 1359 aa17.78■□□□□ 0.44
APTX-220ENST00000476858 DISP3Q9P2K9 1392 aa17.78■□□□□ 0.44
APTX-220ENST00000476858 SHPRHQ149N8 1683 aa17.77■□□□□ 0.44
APTX-220ENST00000476858 CARD11Q9BXL7 1154 aa17.77■□□□□ 0.44
APTX-220ENST00000476858 PHF8Q9UPP1 1060 aa17.77■□□□□ 0.44
APTX-220ENST00000476858 PNPLA6Q8IY17 1366 aa17.77■□□□□ 0.43
APTX-220ENST00000476858 ANKARQ7Z5J8 1434 aa17.76■□□□□ 0.43
APTX-220ENST00000476858 CABP2Q9NPB3 220 aa17.76■□□□□ 0.43
APTX-220ENST00000476858 KIF1AQ12756 1690 aa17.75■□□□□ 0.43
APTX-220ENST00000476858 NUDT16Q96DE0 195 aaKnown RBP17.75■□□□□ 0.43
APTX-220ENST00000476858 TOPAZ1Q8N9V7 1692 aa17.74■□□□□ 0.43
APTX-220ENST00000476858 NUTM2BA6NNL0 878 aaPredicted RBP17.73■□□□□ 0.43
APTX-220ENST00000476858 NUTM2EB1AL46 878 aaPredicted RBP17.73■□□□□ 0.43
APTX-220ENST00000476858 NUTM2AQ8IVF1 878 aaPredicted RBP17.73■□□□□ 0.43
APTX-220ENST00000476858 RGS17Q9UGC6 210 aaPredicted RBP17.73■□□□□ 0.43
APTX-220ENST00000476858 NPHP3Q7Z494 1330 aa17.72■□□□□ 0.43
APTX-220ENST00000476858 ILDR2Q71H61 639 aa17.72■□□□□ 0.43
APTX-220ENST00000476858 KRT28Q7Z3Y7 464 aa17.72■□□□□ 0.43
APTX-220ENST00000476858 LRRC59Q96AG4 307 aaKnown RBP17.72■□□□□ 0.43
APTX-220ENST00000476858 TRPM3Q9HCF6 1732 aaPredicted RBP17.7■□□□□ 0.42
APTX-220ENST00000476858 PLEKHG5O94827 1062 aa17.69■□□□□ 0.42
APTX-220ENST00000476858 SRPK2P78362 688 aaKnown RBP17.69■□□□□ 0.42
APTX-220ENST00000476858 SPATA31A3Q5VYP0 1347 aa17.68■□□□□ 0.42
APTX-220ENST00000476858 ST20-MTHFSA0A0A6YYL1 179 aa17.67■□□□□ 0.42
APTX-220ENST00000476858 TESK2Q96S53 571 aa17.67■□□□□ 0.42
APTX-220ENST00000476858 COL22A1Q8NFW1 1626 aaPredicted RBP17.67■□□□□ 0.42
APTX-220ENST00000476858 SPATA31A6Q5VVP1 1343 aa17.67■□□□□ 0.42
APTX-220ENST00000476858 ITSN1Q15811 1721 aa17.67■□□□□ 0.42
APTX-220ENST00000476858 EIF3AQ14152 1382 aaKnown RBP17.66■□□□□ 0.42
APTX-220ENST00000476858 PPIP5K1Q6PFW1 1433 aa17.66■□□□□ 0.42
APTX-220ENST00000476858 CABLES1Q8TDN4 633 aa17.66■□□□□ 0.42
APTX-220ENST00000476858 TIMELESSQ9UNS1 1208 aa17.66■□□□□ 0.42
APTX-220ENST00000476858 ACEP12821 1306 aa17.66■□□□□ 0.42
APTX-220ENST00000476858 PSME1Q06323 249 aa17.65■□□□□ 0.42
APTX-220ENST00000476858 CCDC61Q9Y6R9 512 aa17.65■□□□□ 0.42
APTX-220ENST00000476858 USP47Q96K76 1375 aa17.65■□□□□ 0.42
APTX-220ENST00000476858 TNS3Q68CZ2 1445 aa17.64■□□□□ 0.42
APTX-220ENST00000476858 ADAMTS2O95450 1211 aa17.64■□□□□ 0.41
APTX-220ENST00000476858 NGDNQ8NEJ9 315 aaKnown RBP17.64■□□□□ 0.41
APTX-220ENST00000476858 CABP1Q9NZU7 370 aa17.64■□□□□ 0.41
APTX-220ENST00000476858 ALS2Q96Q42 1657 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms