RNA–Protein interactions for RNA: ENST00000475445.1

GGA1-218, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 1, humanhuman

TSL 2

Gene GGA1, Length 2,614 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA1-218ENST00000475445 VGFO15240 615 aaPredicted RBP18.83■□□□□ 0.6
GGA1-218ENST00000475445 ZFYVE9O95405 1425 aa18.83■□□□□ 0.6
GGA1-218ENST00000475445 NSD3Q9BZ95 1437 aa18.83■□□□□ 0.6
GGA1-218ENST00000475445 SLFN5Q08AF3 891 aa18.82■□□□□ 0.6
GGA1-218ENST00000475445 TRMT2AQ8IZ69 625 aaKnown RBP18.82■□□□□ 0.6
GGA1-218ENST00000475445 PLIN1O60240 522 aa18.81■□□□□ 0.6
GGA1-218ENST00000475445 CRBNQ96SW2 442 aa18.81■□□□□ 0.6
GGA1-218ENST00000475445 SHPRHQ149N8 1683 aa18.81■□□□□ 0.6
GGA1-218ENST00000475445 IL27Q8NEV9 243 aa18.81■□□□□ 0.6
GGA1-218ENST00000475445 ARHGEF40Q8TER5 1519 aa18.81■□□□□ 0.6
GGA1-218ENST00000475445 PREX1Q8TCU6 1659 aa18.8■□□□□ 0.6
GGA1-218ENST00000475445 MS4A1P11836 297 aa18.8■□□□□ 0.6
GGA1-218ENST00000475445 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.8■□□□□ 0.6
GGA1-218ENST00000475445 TMEM132EQ6IEE7 984 aa18.78■□□□□ 0.6
GGA1-218ENST00000475445 SLC52A1Q9NWF4 448 aa18.78■□□□□ 0.6
GGA1-218ENST00000475445 TULP4Q9NRJ4 1543 aa18.78■□□□□ 0.6
GGA1-218ENST00000475445 NKTRP30414 1462 aaKnown RBP18.78■□□□□ 0.6
GGA1-218ENST00000475445 ANP32AP39687 249 aaKnown RBP18.78■□□□□ 0.6
GGA1-218ENST00000475445 CCDC146Q8IYE0 955 aa18.78■□□□□ 0.6
GGA1-218ENST00000475445 APAF1O14727 1248 aa18.77■□□□□ 0.6
GGA1-218ENST00000475445 EVC2Q86UK5 1308 aa18.77■□□□□ 0.6
GGA1-218ENST00000475445 MYO5BQ9ULV0 1848 aa18.77■□□□□ 0.6
GGA1-218ENST00000475445 MORC1Q86VD1 984 aa18.76■□□□□ 0.59
GGA1-218ENST00000475445 TMEM131LA2VDJ0 1609 aa18.76■□□□□ 0.59
GGA1-218ENST00000475445 NSD2O96028 1365 aa18.76■□□□□ 0.59
GGA1-218ENST00000475445 E9PSI1 815 aa18.76■□□□□ 0.59
GGA1-218ENST00000475445 SLC12A5Q9H2X9 1139 aa18.75■□□□□ 0.59
GGA1-218ENST00000475445 NOP58Q9Y2X3 529 aaKnown RBP18.74■□□□□ 0.59
GGA1-218ENST00000475445 CGNL1Q0VF96 1302 aa18.74■□□□□ 0.59
GGA1-218ENST00000475445 ANKRD36BQ8N2N9 1353 aa18.74■□□□□ 0.59
GGA1-218ENST00000475445 IDI1Q13907 227 aa18.73■□□□□ 0.59
GGA1-218ENST00000475445 NINLQ9Y2I6 1382 aa18.73■□□□□ 0.59
GGA1-218ENST00000475445 C20orf194Q5TEA3 1177 aa18.72■□□□□ 0.59
GGA1-218ENST00000475445 IPO9Q96P70 1041 aaKnown RBP18.72■□□□□ 0.59
GGA1-218ENST00000475445 RTN4Q9NQC3 1192 aaKnown RBP18.71■□□□□ 0.59
GGA1-218ENST00000475445 REREQ9P2R6 1566 aa18.71■□□□□ 0.59
GGA1-218ENST00000475445 IQSEC2Q5JU85 1478 aa18.7■□□□□ 0.58
GGA1-218ENST00000475445 KDM2BQ8NHM5 1336 aa18.7■□□□□ 0.58
GGA1-218ENST00000475445 CLTCQ00610 1675 aaKnown RBP18.7■□□□□ 0.58
GGA1-218ENST00000475445 PDE4AP27815 886 aa18.69■□□□□ 0.58
GGA1-218ENST00000475445 CENPQQ7L2Z9 268 aaPredicted RBP18.69■□□□□ 0.58
GGA1-218ENST00000475445 BACH2Q9BYV9 841 aa18.69■□□□□ 0.58
GGA1-218ENST00000475445 SPINK5Q9NQ38 1064 aaPredicted RBP18.69■□□□□ 0.58
GGA1-218ENST00000475445 CFAP53Q96M91 514 aa18.68■□□□□ 0.58
GGA1-218ENST00000475445 RUNDC1Q96C34 613 aa18.68■□□□□ 0.58
GGA1-218ENST00000475445 NUTM2DQ5VT03 806 aaPredicted RBP18.67■□□□□ 0.58
GGA1-218ENST00000475445 PTPRMP28827 1452 aa18.67■□□□□ 0.58
GGA1-218ENST00000475445 ANKRD26Q9UPS8 1709 aa18.66■□□□□ 0.58
GGA1-218ENST00000475445 NCBP3Q53F19 620 aaKnown RBP18.66■□□□□ 0.58
GGA1-218ENST00000475445 WWC1Q8IX03 1113 aa18.66■□□□□ 0.58
GGA1-218ENST00000475445 AGLP35573 1532 aa18.66■□□□□ 0.58
GGA1-218ENST00000475445 MLECQ14165 292 aa18.66■□□□□ 0.58
GGA1-218ENST00000475445 ATAD2Q6PL18 1390 aa18.64■□□□□ 0.57
GGA1-218ENST00000475445 ABCC11Q96J66 1382 aa18.64■□□□□ 0.57
GGA1-218ENST00000475445 MTHFSP49914 203 aa18.64■□□□□ 0.57
GGA1-218ENST00000475445 NBR1Q14596 966 aa18.63■□□□□ 0.57
GGA1-218ENST00000475445 PHF23Q9BUL5 403 aaPredicted RBP18.63■□□□□ 0.57
GGA1-218ENST00000475445 PPP6R1Q9UPN7 881 aa18.63■□□□□ 0.57
GGA1-218ENST00000475445 YTHDC2Q9H6S0 1430 aaKnown RBP18.63■□□□□ 0.57
GGA1-218ENST00000475445 TNNT2P45379 298 aaPredicted RBP18.62■□□□□ 0.57
GGA1-218ENST00000475445 CABP2Q9NPB3 220 aa18.62■□□□□ 0.57
GGA1-218ENST00000475445 ZBTB47Q9UFB7 747 aaPredicted RBP18.62■□□□□ 0.57
GGA1-218ENST00000475445 DMRT2Q9Y5R5 561 aa18.62■□□□□ 0.57
GGA1-218ENST00000475445 ALKQ9UM73 1620 aa18.62■□□□□ 0.57
GGA1-218ENST00000475445 ADGRB2O60241 1585 aa18.62■□□□□ 0.57
GGA1-218ENST00000475445 CCDC27Q2M243 656 aa18.62■□□□□ 0.57
GGA1-218ENST00000475445 MED14O60244 1454 aa18.62■□□□□ 0.57
GGA1-218ENST00000475445 PAK3O75914 559 aaPredicted RBP18.61■□□□□ 0.57
GGA1-218ENST00000475445 GLIPR1L2Q4G1C9 344 aa18.61■□□□□ 0.57
GGA1-218ENST00000475445 WDR63Q8IWG1 891 aa18.61■□□□□ 0.57
GGA1-218ENST00000475445 PDE3AQ14432 1141 aa18.61■□□□□ 0.57
GGA1-218ENST00000475445 A0A1W2PP64 1363 aa18.61■□□□□ 0.57
GGA1-218ENST00000475445 RTL5Q5HYW3 569 aaPredicted RBP18.6■□□□□ 0.57
GGA1-218ENST00000475445 TCP11L2Q8N4U5 519 aa18.6■□□□□ 0.57
GGA1-218ENST00000475445 BCAR3O75815 825 aa18.59■□□□□ 0.57
GGA1-218ENST00000475445 ADAMTSL3P82987 1691 aa18.59■□□□□ 0.57
GGA1-218ENST00000475445 SPATA31D1Q6ZQQ2 1576 aa18.58■□□□□ 0.57
GGA1-218ENST00000475445 SRPK2P78362 688 aaKnown RBP18.58■□□□□ 0.56
GGA1-218ENST00000475445 STK26Q9P289 416 aa18.58■□□□□ 0.56
GGA1-218ENST00000475445 DLC1Q96QB1 1528 aa18.57■□□□□ 0.56
GGA1-218ENST00000475445 TERF2IPQ9NYB0 399 aa18.57■□□□□ 0.56
GGA1-218ENST00000475445 SAFB2Q14151 953 aaKnown RBP eCLIP18.56■□□□□ 0.56
GGA1-218ENST00000475445 KIF20BQ96Q89 1820 aa18.56■□□□□ 0.56
GGA1-218ENST00000475445 CD163L1Q9NR16 1453 aa18.55■□□□□ 0.56
GGA1-218ENST00000475445 KDM4FA0A1W2PPD8 638 aa18.55■□□□□ 0.56
GGA1-218ENST00000475445 FBXO31Q5XUX0 539 aaPredicted RBP18.55■□□□□ 0.56
GGA1-218ENST00000475445 PRAM1Q96QH2 718 aa18.55■□□□□ 0.56
GGA1-218ENST00000475445 POGKQ9P215 609 aa18.55■□□□□ 0.56
GGA1-218ENST00000475445 COL3A1P02461 1466 aaPredicted RBP18.55■□□□□ 0.56
GGA1-218ENST00000475445 SETD1AO15047 1707 aaKnown RBP18.54■□□□□ 0.56
GGA1-218ENST00000475445 NLRP1Q9C000 1473 aa18.54■□□□□ 0.56
GGA1-218ENST00000475445 NPM2Q86SE8 214 aaKnown RBP18.53■□□□□ 0.56
GGA1-218ENST00000475445 AAMPQ13685 434 aa18.53■□□□□ 0.56
GGA1-218ENST00000475445 ESF1Q9H501 851 aaKnown RBP18.53■□□□□ 0.56
GGA1-218ENST00000475445 RRP7AQ9Y3A4 280 aaKnown RBP18.53■□□□□ 0.56
GGA1-218ENST00000475445 A2ML1A8K2U0 1454 aa18.53■□□□□ 0.56
GGA1-218ENST00000475445 MINK1Q8N4C8 1332 aaPredicted RBP18.53■□□□□ 0.56
GGA1-218ENST00000475445 NEUROD2Q15784 382 aa18.53■□□□□ 0.56
GGA1-218ENST00000475445 U2AF1L5P0DN76 240 aaPredicted RBP18.52■□□□□ 0.56
GGA1-218ENST00000475445 U2AF1Q01081 240 aaKnown RBP eCLIP18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms