RNA–Protein interactions for RNA: ENST00000474721.1

PIKFYVE-208, Transcript of phosphoinositide kinase, FYVE-type zinc finger containing, humanhuman

TSL 4

Gene PIKFYVE, Length 538 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PIKFYVE-208ENST00000474721 CLCN1P35523 988 aa9.03□□□□□ -0.96
PIKFYVE-208ENST00000474721 CYP4X1Q8N118 509 aa9.03□□□□□ -0.96
PIKFYVE-208ENST00000474721 CCDC102AQ96A19 550 aa9.03□□□□□ -0.96
PIKFYVE-208ENST00000474721 USB1Q9BQ65 265 aaKnown RBP9.02□□□□□ -0.97
PIKFYVE-208ENST00000474721 GPCPD1Q9NPB8 672 aa9.02□□□□□ -0.97
PIKFYVE-208ENST00000474721 MMP16P51512 607 aa8.99□□□□□ -0.97
PIKFYVE-208ENST00000474721 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.99□□□□□ -0.97
PIKFYVE-208ENST00000474721 NUTM1Q86Y26 1132 aa8.99□□□□□ -0.97
PIKFYVE-208ENST00000474721 TTC24A2A3L6 582 aaPredicted RBP8.98□□□□□ -0.97
PIKFYVE-208ENST00000474721 HOXA2O43364 376 aa8.98□□□□□ -0.97
PIKFYVE-208ENST00000474721 AAASQ9NRG9 546 aa8.98□□□□□ -0.97
PIKFYVE-208ENST00000474721 TOR4AQ9NXH8 423 aa8.98□□□□□ -0.97
PIKFYVE-208ENST00000474721 ST8SIA5O15466 376 aa8.97□□□□□ -0.97
PIKFYVE-208ENST00000474721 CCDC24Q8N4L8 307 aa8.97□□□□□ -0.97
PIKFYVE-208ENST00000474721 ZNF775Q96BV0 537 aaPredicted RBP8.97□□□□□ -0.97
PIKFYVE-208ENST00000474721 FAM217BQ9NTX9 383 aaPredicted RBP8.97□□□□□ -0.97
PIKFYVE-208ENST00000474721 DXOO77932 396 aaKnown RBP8.96□□□□□ -0.98
PIKFYVE-208ENST00000474721 TRIM32Q13049 653 aa8.96□□□□□ -0.98
PIKFYVE-208ENST00000474721 HLA-CQ95604 372 aa8.96□□□□□ -0.98
PIKFYVE-208ENST00000474721 WNT7AO00755 349 aa8.95□□□□□ -0.98
PIKFYVE-208ENST00000474721 POTECB2RU33 542 aa8.94□□□□□ -0.98
PIKFYVE-208ENST00000474721 AXIN1O15169 862 aa8.94□□□□□ -0.98
PIKFYVE-208ENST00000474721 AVPP01185 164 aa8.93□□□□□ -0.98
PIKFYVE-208ENST00000474721 CTC1Q2NKJ3 1217 aa8.93□□□□□ -0.98
PIKFYVE-208ENST00000474721 CRIPAKQ8N1N5 446 aa8.93□□□□□ -0.98
PIKFYVE-208ENST00000474721 SNIP1Q8TAD8 396 aaKnown RBP8.93□□□□□ -0.98
PIKFYVE-208ENST00000474721 GUCA2AQ02747 115 aa8.92□□□□□ -0.98
PIKFYVE-208ENST00000474721 REPIN1Q9BWE0 567 aaKnown RBP8.92□□□□□ -0.98
PIKFYVE-208ENST00000474721 JUNDP17535 347 aa8.91□□□□□ -0.98
PIKFYVE-208ENST00000474721 SSTR3P32745 418 aaPredicted RBP8.91□□□□□ -0.98
PIKFYVE-208ENST00000474721 FDX1P10109 184 aa8.9□□□□□ -0.98
PIKFYVE-208ENST00000474721 TTLL12Q14166 644 aaPredicted RBP8.9□□□□□ -0.98
PIKFYVE-208ENST00000474721 RETREG3Q86VR2 466 aa8.9□□□□□ -0.98
PIKFYVE-208ENST00000474721 SYMPKQ92797 1274 aaKnown RBP8.9□□□□□ -0.98
PIKFYVE-208ENST00000474721 MRGPRX2Q96LB1 330 aa8.9□□□□□ -0.98
PIKFYVE-208ENST00000474721 C6orf229H3BNL8 230 aa8.89□□□□□ -0.99
PIKFYVE-208ENST00000474721 SMCPP49901 116 aaPredicted RBP8.89□□□□□ -0.99
PIKFYVE-208ENST00000474721 BARGINQ6ZT62 677 aa8.89□□□□□ -0.99
PIKFYVE-208ENST00000474721 WNT7BP56706 349 aa8.88□□□□□ -0.99
PIKFYVE-208ENST00000474721 ZMYND10O75800 440 aa8.87□□□□□ -0.99
PIKFYVE-208ENST00000474721 SMPD1P17405 629 aa8.87□□□□□ -0.99
PIKFYVE-208ENST00000474721 RC3H1Q5TC82 1133 aaKnown RBP8.87□□□□□ -0.99
PIKFYVE-208ENST00000474721 NUDT12Q9BQG2 462 aa8.87□□□□□ -0.99
PIKFYVE-208ENST00000474721 DACH1Q9UI36 760 aa8.87□□□□□ -0.99
PIKFYVE-208ENST00000474721 C11orf95C9JLR9 678 aaPredicted RBP8.86□□□□□ -0.99
PIKFYVE-208ENST00000474721 SPIRE2Q8WWL2 714 aa8.86□□□□□ -0.99
PIKFYVE-208ENST00000474721 J3QL48 77 aa8.85□□□□□ -0.99
PIKFYVE-208ENST00000474721 ZC3H15Q8WU90 426 aaKnown RBP8.85□□□□□ -0.99
PIKFYVE-208ENST00000474721 GMPR2Q9P2T1 348 aaKnown RBP8.85□□□□□ -0.99
PIKFYVE-208ENST00000474721 MS4A1P11836 297 aa8.84□□□□□ -0.99
PIKFYVE-208ENST00000474721 AMHR2Q16671 573 aa8.84□□□□□ -0.99
PIKFYVE-208ENST00000474721 PCDHGC3Q9UN70 934 aa8.84□□□□□ -0.99
PIKFYVE-208ENST00000474721 SKOR1P84550 965 aa8.83□□□□□ -1
PIKFYVE-208ENST00000474721 CCNYL3P0C7X3 344 aa8.82□□□□□ -1
PIKFYVE-208ENST00000474721 NDUFV2P19404 249 aa8.82□□□□□ -1
PIKFYVE-208ENST00000474721 GIGYF2Q6Y7W6 1299 aaKnown RBP8.82□□□□□ -1
PIKFYVE-208ENST00000474721 MOXD2PA6NHM9 499 aa8.81□□□□□ -1
PIKFYVE-208ENST00000474721 SPDYE5A6NIY4 337 aa8.81□□□□□ -1
PIKFYVE-208ENST00000474721 ALDH1A1P00352 501 aa8.81□□□□□ -1
PIKFYVE-208ENST00000474721 DIXDC1Q155Q3 683 aa8.81□□□□□ -1
PIKFYVE-208ENST00000474721 PTCRAQ6ISU1 281 aaPredicted RBP8.81□□□□□ -1
PIKFYVE-208ENST00000474721 TREML4Q6UXN2 200 aa8.81□□□□□ -1
PIKFYVE-208ENST00000474721 EHBP1Q8NDI1 1231 aa8.81□□□□□ -1
PIKFYVE-208ENST00000474721 HPS1Q92902 700 aa8.81□□□□□ -1
PIKFYVE-208ENST00000474721 BEGAINQ9BUH8 593 aa8.81□□□□□ -1
PIKFYVE-208ENST00000474721 ATP13A2Q9NQ11 1180 aa8.81□□□□□ -1
PIKFYVE-208ENST00000474721 MTMR2Q13614 643 aa8.8□□□□□ -1
PIKFYVE-208ENST00000474721 SENP2Q9HC62 589 aa8.8□□□□□ -1
PIKFYVE-208ENST00000474721 PTPRNQ16849 979 aa8.79□□□□□ -1
PIKFYVE-208ENST00000474721 PRR7Q8TB68 274 aa8.79□□□□□ -1
PIKFYVE-208ENST00000474721 EVA1BQ9NVM1 165 aa8.78□□□□□ -1
PIKFYVE-208ENST00000474721 WASF2Q9Y6W5 498 aa8.78□□□□□ -1
PIKFYVE-208ENST00000474721 AK7Q96M32 723 aa8.77□□□□□ -1.01
PIKFYVE-208ENST00000474721 TBC1D2Q9BYX2 928 aa8.77□□□□□ -1.01
PIKFYVE-208ENST00000474721 GJA5P36382 358 aa8.76□□□□□ -1.01
PIKFYVE-208ENST00000474721 KCNH2Q12809 1159 aa8.76□□□□□ -1.01
PIKFYVE-208ENST00000474721 DESI1Q6ICB0 168 aa8.76□□□□□ -1.01
PIKFYVE-208ENST00000474721 KIFC2Q96AC6 838 aa8.76□□□□□ -1.01
PIKFYVE-208ENST00000474721 UNC93B1Q9H1C4 597 aa8.76□□□□□ -1.01
PIKFYVE-208ENST00000474721 WFS1O76024 890 aa8.75□□□□□ -1.01
PIKFYVE-208ENST00000474721 SH3BP2P78314 561 aa8.75□□□□□ -1.01
PIKFYVE-208ENST00000474721 TRIM47Q96LD4 638 aa8.75□□□□□ -1.01
PIKFYVE-208ENST00000474721 TRIM66O15016 1216 aa8.74□□□□□ -1.01
PIKFYVE-208ENST00000474721 SIAH2O43255 324 aa8.74□□□□□ -1.01
PIKFYVE-208ENST00000474721 RSBN1LQ6PCB5 846 aaPredicted RBP8.74□□□□□ -1.01
PIKFYVE-208ENST00000474721 PARP9Q8IXQ6 854 aa8.74□□□□□ -1.01
PIKFYVE-208ENST00000474721 BAP1Q92560 729 aa8.74□□□□□ -1.01
PIKFYVE-208ENST00000474721 SNRPBP14678 240 aaKnown RBP8.73□□□□□ -1.01
PIKFYVE-208ENST00000474721 CTHP32929 405 aa8.73□□□□□ -1.01
PIKFYVE-208ENST00000474721 LINC01559Q495D7 138 aa8.73□□□□□ -1.01
PIKFYVE-208ENST00000474721 ZBTB3Q9H5J0 574 aa8.72□□□□□ -1.01
PIKFYVE-208ENST00000474721 PLEKHG3A1L390 1219 aa8.71□□□□□ -1.02
PIKFYVE-208ENST00000474721 SPTLC1O15269 473 aa8.71□□□□□ -1.02
PIKFYVE-208ENST00000474721 CAPN5O15484 640 aaPredicted RBP8.71□□□□□ -1.02
PIKFYVE-208ENST00000474721 VARSP26640 1264 aaKnown RBP8.71□□□□□ -1.02
PIKFYVE-208ENST00000474721 RIC3Q7Z5B4 369 aa8.71□□□□□ -1.02
PIKFYVE-208ENST00000474721 ZNF511Q8NB15 262 aa8.71□□□□□ -1.02
PIKFYVE-208ENST00000474721 LCE2AQ5TA79 106 aaPredicted RBP8.7□□□□□ -1.02
PIKFYVE-208ENST00000474721 LYPD8Q6UX82 237 aa8.7□□□□□ -1.02
PIKFYVE-208ENST00000474721 PCDHB15Q9Y5E8 787 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms