RNA–Protein interactions for RNA: ENST00000474330.1

CDHR3-210, Transcript of cadherin related family member 3, humanhuman

TSL 5

Gene CDHR3, Length 1,603 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-210ENST00000474330 KNDC1Q76NI1 1749 aa28.31■■■□□ 2.12
CDHR3-210ENST00000474330 CENPJQ9HC77 1338 aaPredicted RBP28.31■■■□□ 2.12
CDHR3-210ENST00000474330 AMOTL2Q9Y2J4 779 aa28.3■■■□□ 2.12
CDHR3-210ENST00000474330 SCAF1Q9H7N4 1312 aaKnown RBP28.3■■■□□ 2.12
CDHR3-210ENST00000474330 LRPPRCP42704 1394 aaKnown RBP28.28■■■□□ 2.12
CDHR3-210ENST00000474330 DISP3Q9P2K9 1392 aa28.28■■■□□ 2.12
CDHR3-210ENST00000474330 QRICH2Q9H0J4 1663 aa28.27■■■□□ 2.12
CDHR3-210ENST00000474330 XRN1Q8IZH2 1706 aaKnown RBP28.27■■■□□ 2.12
CDHR3-210ENST00000474330 STK26Q9P289 416 aa28.26■■■□□ 2.11
CDHR3-210ENST00000474330 DLC1Q96QB1 1528 aa28.25■■■□□ 2.11
CDHR3-210ENST00000474330 ABCC11Q96J66 1382 aa28.25■■■□□ 2.11
CDHR3-210ENST00000474330 HSPA1LP34931 641 aa28.24■■■□□ 2.11
CDHR3-210ENST00000474330 POLR3GLQ9BT43 218 aa28.22■■■□□ 2.11
CDHR3-210ENST00000474330 NCOA3Q9Y6Q9 1424 aa28.22■■■□□ 2.11
CDHR3-210ENST00000474330 CDCA8Q53HL2 280 aa28.21■■■□□ 2.11
CDHR3-210ENST00000474330 TECPR2O15040 1411 aa28.21■■■□□ 2.11
CDHR3-210ENST00000474330 MSH6P52701 1360 aa28.19■■■□□ 2.1
CDHR3-210ENST00000474330 SIRT1Q96EB6 747 aa28.18■■■□□ 2.1
CDHR3-210ENST00000474330 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.17■■■□□ 2.1
CDHR3-210ENST00000474330 PRAM1Q96QH2 718 aa28.17■■■□□ 2.1
CDHR3-210ENST00000474330 MIER1Q8N108 512 aa28.15■■■□□ 2.1
CDHR3-210ENST00000474330 POGKQ9P215 609 aa28.15■■■□□ 2.1
CDHR3-210ENST00000474330 FAM135BQ49AJ0 1406 aa28.14■■■□□ 2.1
CDHR3-210ENST00000474330 PTCH1Q13635 1447 aa28.14■■■□□ 2.09
CDHR3-210ENST00000474330 C19orf44Q9H6X5 657 aa28.14■■■□□ 2.09
CDHR3-210ENST00000474330 SLAIN2Q9P270 581 aa28.13■■■□□ 2.09
CDHR3-210ENST00000474330 C14orf37Q86TY3 774 aa28.11■■■□□ 2.09
CDHR3-210ENST00000474330 ROBO1Q9Y6N7 1651 aa28.11■■■□□ 2.09
CDHR3-210ENST00000474330 ROBO2Q9HCK4 1378 aa28.11■■■□□ 2.09
CDHR3-210ENST00000474330 SAFB2Q14151 953 aaKnown RBP eCLIP28.1■■■□□ 2.09
CDHR3-210ENST00000474330 PUS7Q96PZ0 661 aaKnown RBP28.1■■■□□ 2.09
CDHR3-210ENST00000474330 EVC2Q86UK5 1308 aa28.09■■■□□ 2.09
CDHR3-210ENST00000474330 TULP4Q9NRJ4 1543 aa28.08■■■□□ 2.09
CDHR3-210ENST00000474330 WAPLQ7Z5K2 1190 aa28.08■■■□□ 2.09
CDHR3-210ENST00000474330 PLEKHH1Q9ULM0 1364 aa28.07■■■□□ 2.08
CDHR3-210ENST00000474330 CADPS2Q86UW7 1296 aa28.06■■■□□ 2.08
CDHR3-210ENST00000474330 MYOM1P52179 1685 aa28.05■■■□□ 2.08
CDHR3-210ENST00000474330 ANP32CO43423 234 aa28.05■■■□□ 2.08
CDHR3-210ENST00000474330 NALCNQ8IZF0 1738 aa28.05■■■□□ 2.08
CDHR3-210ENST00000474330 ATF3P18847 181 aa28.04■■■□□ 2.08
CDHR3-210ENST00000474330 MINK1Q8N4C8 1332 aaPredicted RBP28.04■■■□□ 2.08
CDHR3-210ENST00000474330 DCCP43146 1447 aa28.01■■■□□ 2.07
CDHR3-210ENST00000474330 ADGRL3Q9HAR2 1447 aa28.01■■■□□ 2.07
CDHR3-210ENST00000474330 ADGRB2O60241 1585 aa27.99■■■□□ 2.07
CDHR3-210ENST00000474330 PANK3Q9H999 370 aa27.99■■■□□ 2.07
CDHR3-210ENST00000474330 PER1O15534 1290 aaPredicted RBP27.96■■■□□ 2.07
CDHR3-210ENST00000474330 MST1RQ04912 1400 aa27.95■■■□□ 2.07
CDHR3-210ENST00000474330 CDK19Q9BWU1 502 aa27.95■■■□□ 2.06
CDHR3-210ENST00000474330 CABP2Q9NPB3 220 aa27.95■■■□□ 2.06
CDHR3-210ENST00000474330 SRPK2P78362 688 aaKnown RBP27.94■■■□□ 2.06
CDHR3-210ENST00000474330 ATAD2Q6PL18 1390 aa27.93■■■□□ 2.06
CDHR3-210ENST00000474330 PHLPP1O60346 1717 aa27.93■■■□□ 2.06
CDHR3-210ENST00000474330 WASLO00401 505 aaPredicted RBP27.92■■■□□ 2.06
CDHR3-210ENST00000474330 BRINP3Q76B58 766 aa27.92■■■□□ 2.06
CDHR3-210ENST00000474330 NINLQ9Y2I6 1382 aa27.9■■■□□ 2.06
CDHR3-210ENST00000474330 PRKRIP1Q9H875 184 aaPredicted RBP27.9■■■□□ 2.06
CDHR3-210ENST00000474330 MED1Q15648 1581 aaPredicted RBP27.88■■■□□ 2.05
CDHR3-210ENST00000474330 TMC1Q8TDI8 760 aa27.88■■■□□ 2.05
CDHR3-210ENST00000474330 SLC12A5Q9H2X9 1139 aa27.88■■■□□ 2.05
CDHR3-210ENST00000474330 CDC42BPGQ6DT37 1551 aa27.87■■■□□ 2.05
CDHR3-210ENST00000474330 COL16A1Q07092 1604 aaPredicted RBP27.87■■■□□ 2.05
CDHR3-210ENST00000474330 AHDC1Q5TGY3 1603 aaPredicted RBP27.86■■■□□ 2.05
CDHR3-210ENST00000474330 CCER2I3L3R5 266 aa27.85■■■□□ 2.05
CDHR3-210ENST00000474330 C1orf167Q5SNV9 1468 aa27.85■■■□□ 2.05
CDHR3-210ENST00000474330 FMN2Q9NZ56 1722 aa27.84■■■□□ 2.05
CDHR3-210ENST00000474330 KNSTRNQ9Y448 316 aa27.83■■■□□ 2.05
CDHR3-210ENST00000474330 KTN1Q86UP2 1357 aaKnown RBP27.82■■■□□ 2.04
CDHR3-210ENST00000474330 ANKRD36BQ8N2N9 1353 aa27.82■■■□□ 2.04
CDHR3-210ENST00000474330 NHSL1Q5SYE7 1610 aa27.81■■■□□ 2.04
CDHR3-210ENST00000474330 CARD14Q9BXL6 1004 aa27.8■■■□□ 2.04
CDHR3-210ENST00000474330 ORAI2Q96SN7 254 aa27.79■■■□□ 2.04
CDHR3-210ENST00000474330 RGPD8O14715 1765 aaPredicted RBP27.79■■■□□ 2.04
CDHR3-210ENST00000474330 ITSN1Q15811 1721 aa27.78■■■□□ 2.04
CDHR3-210ENST00000474330 DDX17Q92841 729 aaKnown RBP27.78■■■□□ 2.04
CDHR3-210ENST00000474330 NPC1L1Q9UHC9 1359 aa27.78■■■□□ 2.04
CDHR3-210ENST00000474330 RALBP1Q15311 655 aa27.78■■■□□ 2.04
CDHR3-210ENST00000474330 AMER1Q5JTC6 1135 aaPredicted RBP27.78■■■□□ 2.04
CDHR3-210ENST00000474330 NUDT16Q96DE0 195 aaKnown RBP27.78■■■□□ 2.04
CDHR3-210ENST00000474330 ATP7BP35670 1465 aa27.77■■■□□ 2.04
CDHR3-210ENST00000474330 TOPAZ1Q8N9V7 1692 aa27.77■■■□□ 2.04
CDHR3-210ENST00000474330 USP32Q8NFA0 1604 aa27.77■■■□□ 2.04
CDHR3-210ENST00000474330 ILDR2Q71H61 639 aa27.76■■■□□ 2.03
CDHR3-210ENST00000474330 CABP1Q9NZU7 370 aa27.76■■■□□ 2.03
CDHR3-210ENST00000474330 CCDC61Q9Y6R9 512 aa27.76■■■□□ 2.03
CDHR3-210ENST00000474330 CD163L1Q9NR16 1453 aa27.75■■■□□ 2.03
CDHR3-210ENST00000474330 TERF2IPQ9NYB0 399 aa27.75■■■□□ 2.03
CDHR3-210ENST00000474330 PARD3Q8TEW0 1356 aa27.75■■■□□ 2.03
CDHR3-210ENST00000474330 JCADQ9P266 1359 aa27.75■■■□□ 2.03
CDHR3-210ENST00000474330 PRR36Q9H6K5 1346 aa27.74■■■□□ 2.03
CDHR3-210ENST00000474330 CNGB1Q14028 1251 aaPredicted RBP27.74■■■□□ 2.03
CDHR3-210ENST00000474330 A0A1W2PP64 1363 aa27.73■■■□□ 2.03
CDHR3-210ENST00000474330 PPIP5K1Q6PFW1 1433 aa27.73■■■□□ 2.03
CDHR3-210ENST00000474330 ANKARQ7Z5J8 1434 aa27.73■■■□□ 2.03
CDHR3-210ENST00000474330 NSD3Q9BZ95 1437 aa27.73■■■□□ 2.03
CDHR3-210ENST00000474330 CC2D1BQ5T0F9 858 aaKnown RBP27.72■■■□□ 2.03
CDHR3-210ENST00000474330 NUTM2FA1L443 756 aa27.7■■■□□ 2.03
CDHR3-210ENST00000474330 HDGFL2Q7Z4V5 671 aaPredicted RBP27.7■■■□□ 2.03
CDHR3-210ENST00000474330 SHPRHQ149N8 1683 aa27.7■■■□□ 2.02
CDHR3-210ENST00000474330 ESCO1Q5FWF5 840 aa27.68■■■□□ 2.02
CDHR3-210ENST00000474330 CPSF1Q10570 1443 aaKnown RBP27.67■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms