RNA–Protein interactions for RNA: ENST00000473711.1

SP140-208, Transcript of SP140 nuclear body protein, humanhuman

TSL 2

Gene SP140, Length 644 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-208ENST00000473711 TMF1P82094 1093 aa14.92□□□□□ -0.02
SP140-208ENST00000473711 CEP170BQ9Y4F5 1589 aaPredicted RBP14.92□□□□□ -0.02
SP140-208ENST00000473711 ARHGAP23Q9P227 1491 aa14.91□□□□□ -0.02
SP140-208ENST00000473711 SLIT1O75093 1534 aa14.91□□□□□ -0.02
SP140-208ENST00000473711 CENPJQ9HC77 1338 aaPredicted RBP14.91□□□□□ -0.02
SP140-208ENST00000473711 PLEKHG1Q9ULL1 1385 aa14.9□□□□□ -0.02
SP140-208ENST00000473711 MIER1Q8N108 512 aa14.9□□□□□ -0.02
SP140-208ENST00000473711 SETD1BQ9UPS6 1966 aaKnown RBP14.9□□□□□ -0.02
SP140-208ENST00000473711 DISP3Q9P2K9 1392 aa14.89□□□□□ -0.03
SP140-208ENST00000473711 ASXL1Q8IXJ9 1541 aa14.89□□□□□ -0.03
SP140-208ENST00000473711 ANKLE2Q86XL3 938 aa14.89□□□□□ -0.03
SP140-208ENST00000473711 SLC26A8Q96RN1 970 aa14.89□□□□□ -0.03
SP140-208ENST00000473711 YTHDC2Q9H6S0 1430 aaKnown RBP14.89□□□□□ -0.03
SP140-208ENST00000473711 METP08581 1390 aa14.87□□□□□ -0.03
SP140-208ENST00000473711 SAFB2Q14151 953 aaKnown RBP eCLIP14.87□□□□□ -0.03
SP140-208ENST00000473711 LRPPRCP42704 1394 aaKnown RBP14.86□□□□□ -0.03
SP140-208ENST00000473711 ADAMTS13Q76LX8 1427 aa14.86□□□□□ -0.03
SP140-208ENST00000473711 NRXN3Q9Y4C0 1643 aa14.86□□□□□ -0.03
SP140-208ENST00000473711 SLC24A1O60721 1099 aa14.86□□□□□ -0.03
SP140-208ENST00000473711 POGKQ9P215 609 aa14.86□□□□□ -0.03
SP140-208ENST00000473711 CDCA8Q53HL2 280 aa14.85□□□□□ -0.03
SP140-208ENST00000473711 PRAM1Q96QH2 718 aa14.85□□□□□ -0.03
SP140-208ENST00000473711 TBX22Q9Y458 520 aa14.85□□□□□ -0.03
SP140-208ENST00000473711 ZNF142P52746 1687 aaPredicted RBP14.84□□□□□ -0.03
SP140-208ENST00000473711 WAPLQ7Z5K2 1190 aa14.84□□□□□ -0.03
SP140-208ENST00000473711 ZNF692Q9BU19 519 aaPredicted RBP14.84□□□□□ -0.03
SP140-208ENST00000473711 ABCC11Q96J66 1382 aa14.84□□□□□ -0.03
SP140-208ENST00000473711 NCKAP5LQ9HCH0 1330 aa14.83□□□□□ -0.04
SP140-208ENST00000473711 POLR1AO95602 1720 aaPredicted RBP14.83□□□□□ -0.04
SP140-208ENST00000473711 PITPNM1O00562 1244 aa14.82□□□□□ -0.04
SP140-208ENST00000473711 SETD1AO15047 1707 aaKnown RBP14.82□□□□□ -0.04
SP140-208ENST00000473711 MED14O60244 1454 aa14.82□□□□□ -0.04
SP140-208ENST00000473711 ANP32CO43423 234 aa14.81□□□□□ -0.04
SP140-208ENST00000473711 MINK1Q8N4C8 1332 aaPredicted RBP14.81□□□□□ -0.04
SP140-208ENST00000473711 SBNO2Q9Y2G9 1366 aa14.81□□□□□ -0.04
SP140-208ENST00000473711 SIRT1Q96EB6 747 aa14.8□□□□□ -0.04
SP140-208ENST00000473711 ARHGEF28Q8N1W1 1705 aaKnown RBP14.8□□□□□ -0.04
SP140-208ENST00000473711 EVC2Q86UK5 1308 aa14.79□□□□□ -0.04
SP140-208ENST00000473711 PLEKHH1Q9ULM0 1364 aa14.79□□□□□ -0.04
SP140-208ENST00000473711 AMOTL2Q9Y2J4 779 aa14.79□□□□□ -0.04
SP140-208ENST00000473711 SSUH2Q9Y2M2 353 aa14.79□□□□□ -0.04
SP140-208ENST00000473711 QRICH2Q9H0J4 1663 aa14.78□□□□□ -0.04
SP140-208ENST00000473711 DLC1Q96QB1 1528 aa14.78□□□□□ -0.04
SP140-208ENST00000473711 PTPRUQ92729 1446 aa14.78□□□□□ -0.04
SP140-208ENST00000473711 HSPA2P54652 639 aa14.78□□□□□ -0.04
SP140-208ENST00000473711 PANK3Q9H999 370 aa14.78□□□□□ -0.04
SP140-208ENST00000473711 NPHP4O75161 1426 aaPredicted RBP14.76□□□□□ -0.05
SP140-208ENST00000473711 CNGB1Q14028 1251 aaPredicted RBP14.76□□□□□ -0.05
SP140-208ENST00000473711 CABP2Q9NPB3 220 aa14.76□□□□□ -0.05
SP140-208ENST00000473711 TECPR2O15040 1411 aa14.75□□□□□ -0.05
SP140-208ENST00000473711 ROBO2Q9HCK4 1378 aa14.75□□□□□ -0.05
SP140-208ENST00000473711 SRPK2P78362 688 aaKnown RBP14.75□□□□□ -0.05
SP140-208ENST00000473711 CDK19Q9BWU1 502 aa14.75□□□□□ -0.05
SP140-208ENST00000473711 FAM135BQ49AJ0 1406 aa14.75□□□□□ -0.05
SP140-208ENST00000473711 DIP2AQ14689 1571 aa14.74□□□□□ -0.05
SP140-208ENST00000473711 TMC1Q8TDI8 760 aa14.74□□□□□ -0.05
SP140-208ENST00000473711 PUS7Q96PZ0 661 aaKnown RBP14.74□□□□□ -0.05
SP140-208ENST00000473711 PIK3R4Q99570 1358 aa14.73□□□□□ -0.05
SP140-208ENST00000473711 TULP4Q9NRJ4 1543 aa14.72□□□□□ -0.05
SP140-208ENST00000473711 PER1O15534 1290 aaPredicted RBP14.72□□□□□ -0.05
SP140-208ENST00000473711 KCNA6P17658 529 aa14.72□□□□□ -0.05
SP140-208ENST00000473711 SLC12A5Q9H2X9 1139 aa14.72□□□□□ -0.05
SP140-208ENST00000473711 WASLO00401 505 aaPredicted RBP14.71□□□□□ -0.05
SP140-208ENST00000473711 PRKRIP1Q9H875 184 aaPredicted RBP14.71□□□□□ -0.05
SP140-208ENST00000473711 KNDC1Q76NI1 1749 aa14.71□□□□□ -0.05
SP140-208ENST00000473711 CPS1P31327 1500 aa14.71□□□□□ -0.06
SP140-208ENST00000473711 PIP4P2Q8N4L2 257 aa14.7□□□□□ -0.06
SP140-208ENST00000473711 SPDYE1Q8NFV5 336 aaPredicted RBP14.69□□□□□ -0.06
SP140-208ENST00000473711 KNSTRNQ9Y448 316 aa14.69□□□□□ -0.06
SP140-208ENST00000473711 CCER2I3L3R5 266 aa14.67□□□□□ -0.06
SP140-208ENST00000473711 CARD14Q9BXL6 1004 aa14.67□□□□□ -0.06
SP140-208ENST00000473711 PTCH1Q13635 1447 aa14.66□□□□□ -0.06
SP140-208ENST00000473711 ATAD2Q6PL18 1390 aa14.66□□□□□ -0.06
SP140-208ENST00000473711 CC2D1BQ5T0F9 858 aaKnown RBP14.66□□□□□ -0.06
SP140-208ENST00000473711 CABP1Q9NZU7 370 aa14.66□□□□□ -0.06
SP140-208ENST00000473711 MYOM1P52179 1685 aa14.65□□□□□ -0.06
SP140-208ENST00000473711 FXR2P51116 673 aaKnown RBP eCLIP14.65□□□□□ -0.06
SP140-208ENST00000473711 NUDT16Q96DE0 195 aaKnown RBP14.65□□□□□ -0.06
SP140-208ENST00000473711 RBM33Q96EV2 1170 aaKnown RBP14.65□□□□□ -0.06
SP140-208ENST00000473711 XRN1Q8IZH2 1706 aaKnown RBP14.65□□□□□ -0.06
SP140-208ENST00000473711 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.64□□□□□ -0.07
SP140-208ENST00000473711 NUTM2FA1L443 756 aa14.64□□□□□ -0.07
SP140-208ENST00000473711 CLEC11AQ9Y240 323 aa14.64□□□□□ -0.07
SP140-208ENST00000473711 CHD2O14647 1828 aaKnown RBP14.64□□□□□ -0.07
SP140-208ENST00000473711 KTN1Q86UP2 1357 aaKnown RBP14.63□□□□□ -0.07
SP140-208ENST00000473711 RALBP1Q15311 655 aa14.63□□□□□ -0.07
SP140-208ENST00000473711 PROSER2Q86WR7 435 aaPredicted RBP14.63□□□□□ -0.07
SP140-208ENST00000473711 AMER1Q5JTC6 1135 aaPredicted RBP14.62□□□□□ -0.07
SP140-208ENST00000473711 TERF2IPQ9NYB0 399 aa14.62□□□□□ -0.07
SP140-208ENST00000473711 PRR36Q9H6K5 1346 aa14.62□□□□□ -0.07
SP140-208ENST00000473711 NINLQ9Y2I6 1382 aa14.61□□□□□ -0.07
SP140-208ENST00000473711 CCDC184Q52MB2 194 aa14.61□□□□□ -0.07
SP140-208ENST00000473711 HDGFL2Q7Z4V5 671 aaPredicted RBP14.61□□□□□ -0.07
SP140-208ENST00000473711 CERKQ8TCT0 537 aa14.61□□□□□ -0.07
SP140-208ENST00000473711 CCDC61Q9Y6R9 512 aa14.61□□□□□ -0.07
SP140-208ENST00000473711 ANKRD36BQ8N2N9 1353 aa14.6□□□□□ -0.07
SP140-208ENST00000473711 C14orf37Q86TY3 774 aa14.6□□□□□ -0.07
SP140-208ENST00000473711 NSD3Q9BZ95 1437 aa14.59□□□□□ -0.07
SP140-208ENST00000473711 YTHDC1Q96MU7 727 aaKnown RBP14.59□□□□□ -0.07
SP140-208ENST00000473711 PPIP5K1Q6PFW1 1433 aa14.58□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms