RNA–Protein interactions for RNA: ENST00000473626.1

CNOT9-206, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 4

Gene CNOT9, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-206ENST00000473626 C6orf229H3BNL8 230 aa11.47□□□□□ -0.57
CNOT9-206ENST00000473626 TLL1O43897 1013 aa11.47□□□□□ -0.57
CNOT9-206ENST00000473626 HRCP23327 699 aa11.47□□□□□ -0.57
CNOT9-206ENST00000473626 TJAP1Q5JTD0 557 aa11.47□□□□□ -0.57
CNOT9-206ENST00000473626 LILRB3O75022 631 aa11.46□□□□□ -0.57
CNOT9-206ENST00000473626 NUTM2BA6NNL0 878 aaPredicted RBP11.45□□□□□ -0.58
CNOT9-206ENST00000473626 NUTM2EB1AL46 878 aaPredicted RBP11.45□□□□□ -0.58
CNOT9-206ENST00000473626 NUTM2DQ5VT03 806 aaPredicted RBP11.45□□□□□ -0.58
CNOT9-206ENST00000473626 NUTM2AQ8IVF1 878 aaPredicted RBP11.45□□□□□ -0.58
CNOT9-206ENST00000473626 NR1I2O75469 434 aa11.44□□□□□ -0.58
CNOT9-206ENST00000473626 GJA5P36382 358 aa11.44□□□□□ -0.58
CNOT9-206ENST00000473626 THAP11Q96EK4 314 aa11.44□□□□□ -0.58
CNOT9-206ENST00000473626 GTF3C3Q9Y5Q9 886 aa11.44□□□□□ -0.58
CNOT9-206ENST00000473626 MTMR2Q13614 643 aa11.43□□□□□ -0.58
CNOT9-206ENST00000473626 TUSC1Q2TAM9 212 aa11.43□□□□□ -0.58
CNOT9-206ENST00000473626 BRICD5Q6PL45 260 aa11.43□□□□□ -0.58
CNOT9-206ENST00000473626 NKX2-3Q8TAU0 364 aa11.43□□□□□ -0.58
CNOT9-206ENST00000473626 ZBTB3Q9H5J0 574 aa11.43□□□□□ -0.58
CNOT9-206ENST00000473626 ZPR1O75312 459 aa11.42□□□□□ -0.58
CNOT9-206ENST00000473626 IL21Q9HBE4 155 aa11.42□□□□□ -0.58
CNOT9-206ENST00000473626 CFAP99D6REC4 459 aa11.41□□□□□ -0.58
CNOT9-206ENST00000473626 RFC5P40937 340 aa11.41□□□□□ -0.58
CNOT9-206ENST00000473626 FMNL1O95466 1100 aaPredicted RBP11.4□□□□□ -0.58
CNOT9-206ENST00000473626 PRPF38BQ5VTL8 546 aaKnown RBP11.4□□□□□ -0.58
CNOT9-206ENST00000473626 Q3C1V9 767 aa11.39□□□□□ -0.59
CNOT9-206ENST00000473626 PPP2R2DQ66LE6 453 aa11.39□□□□□ -0.59
CNOT9-206ENST00000473626 TSC1Q92574 1164 aa11.39□□□□□ -0.59
CNOT9-206ENST00000473626 SPSB2Q99619 263 aa11.39□□□□□ -0.59
CNOT9-206ENST00000473626 PRDM9Q9NQV7 894 aa11.39□□□□□ -0.59
CNOT9-206ENST00000473626 FAM160A2Q8N612 972 aaPredicted RBP11.38□□□□□ -0.59
CNOT9-206ENST00000473626 PRR7Q8TB68 274 aa11.38□□□□□ -0.59
CNOT9-206ENST00000473626 RETREG3Q86VR2 466 aa11.37□□□□□ -0.59
CNOT9-206ENST00000473626 USB1Q9BQ65 265 aaKnown RBP11.37□□□□□ -0.59
CNOT9-206ENST00000473626 AP1G2O75843 785 aa11.36□□□□□ -0.59
CNOT9-206ENST00000473626 SALL2Q9Y467 1007 aaPredicted RBP11.36□□□□□ -0.59
CNOT9-206ENST00000473626 ADH1BP00325 375 aa11.34□□□□□ -0.59
CNOT9-206ENST00000473626 KCNC4Q03721 635 aa11.34□□□□□ -0.59
CNOT9-206ENST00000473626 CTDSPL2Q05D32 466 aa11.34□□□□□ -0.59
CNOT9-206ENST00000473626 ITGBL1O95965 494 aaPredicted RBP11.33□□□□□ -0.6
CNOT9-206ENST00000473626 SPDYE5A6NIY4 337 aa11.32□□□□□ -0.6
CNOT9-206ENST00000473626 PER1O15534 1290 aaPredicted RBP11.32□□□□□ -0.6
CNOT9-206ENST00000473626 SNRKQ9NRH2 765 aa11.32□□□□□ -0.6
CNOT9-206ENST00000473626 S1PR4O95977 384 aa11.31□□□□□ -0.6
CNOT9-206ENST00000473626 PPEF1O14829 653 aaPredicted RBP11.3□□□□□ -0.6
CNOT9-206ENST00000473626 LRRN4Q8WUT4 740 aa11.3□□□□□ -0.6
CNOT9-206ENST00000473626 MSS51Q4VC12 460 aa11.29□□□□□ -0.6
CNOT9-206ENST00000473626 SLC6A16Q9GZN6 736 aa11.29□□□□□ -0.6
CNOT9-206ENST00000473626 USP17L8P0C7I0 530 aa11.28□□□□□ -0.6
CNOT9-206ENST00000473626 JUNDP17535 347 aa11.28□□□□□ -0.6
CNOT9-206ENST00000473626 TMEM259Q4ZIN3 620 aa11.28□□□□□ -0.6
CNOT9-206ENST00000473626 HELBQ8NG08 1087 aaPredicted RBP11.27□□□□□ -0.61
CNOT9-206ENST00000473626 HMX1Q9NP08 348 aaPredicted RBP11.27□□□□□ -0.61
CNOT9-206ENST00000473626 DXOO77932 396 aaKnown RBP11.25□□□□□ -0.61
CNOT9-206ENST00000473626 PLA2G2EQ9NZK7 142 aa11.25□□□□□ -0.61
CNOT9-206ENST00000473626 MMP16P51512 607 aa11.24□□□□□ -0.61
CNOT9-206ENST00000473626 LYPD8Q6UX82 237 aa11.24□□□□□ -0.61
CNOT9-206ENST00000473626 MTMR14Q8NCE2 650 aa11.24□□□□□ -0.61
CNOT9-206ENST00000473626 EPS8L1Q8TE68 723 aa11.24□□□□□ -0.61
CNOT9-206ENST00000473626 MCM6Q14566 821 aa11.23□□□□□ -0.61
CNOT9-206ENST00000473626 PPP1R18Q6NYC8 613 aa11.23□□□□□ -0.61
CNOT9-206ENST00000473626 BANK1Q8NDB2 785 aa11.23□□□□□ -0.61
CNOT9-206ENST00000473626 DESI1Q6ICB0 168 aa11.22□□□□□ -0.61
CNOT9-206ENST00000473626 CCDC24Q8N4L8 307 aa11.22□□□□□ -0.61
CNOT9-206ENST00000473626 NUDT12Q9BQG2 462 aa11.21□□□□□ -0.61
CNOT9-206ENST00000473626 MAP10Q9P2G4 905 aa11.21□□□□□ -0.61
CNOT9-206ENST00000473626 FCF1Q9Y324 198 aaKnown RBP11.21□□□□□ -0.61
CNOT9-206ENST00000473626 RNF223E7ERA6 249 aa11.2□□□□□ -0.62
CNOT9-206ENST00000473626 NR6A1Q15406 480 aa11.2□□□□□ -0.62
CNOT9-206ENST00000473626 PTPRNQ16849 979 aa11.19□□□□□ -0.62
CNOT9-206ENST00000473626 CTHP32929 405 aa11.18□□□□□ -0.62
CNOT9-206ENST00000473626 PLA2G2CQ5R387 149 aa11.18□□□□□ -0.62
CNOT9-206ENST00000473626 PTCRAQ6ISU1 281 aaPredicted RBP11.18□□□□□ -0.62
CNOT9-206ENST00000473626 POM121Q96HA1 1249 aa11.18□□□□□ -0.62
CNOT9-206ENST00000473626 GJD4Q96KN9 370 aaPredicted RBP11.18□□□□□ -0.62
CNOT9-206ENST00000473626 TRIM34Q9BYJ4 488 aa11.18□□□□□ -0.62
CNOT9-206ENST00000473626 F12P00748 615 aaPredicted RBP11.17□□□□□ -0.62
CNOT9-206ENST00000473626 CCNYL3P0C7X3 344 aa11.17□□□□□ -0.62
CNOT9-206ENST00000473626 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.17□□□□□ -0.62
CNOT9-206ENST00000473626 FLIIQ13045 1269 aa11.16□□□□□ -0.62
CNOT9-206ENST00000473626 TIMELESSQ9UNS1 1208 aa11.16□□□□□ -0.62
CNOT9-206ENST00000473626 CLUAP1Q96AJ1 413 aa11.15□□□□□ -0.62
CNOT9-206ENST00000473626 EVA1BQ9NVM1 165 aa11.15□□□□□ -0.62
CNOT9-206ENST00000473626 KCNH2Q12809 1159 aa11.14□□□□□ -0.63
CNOT9-206ENST00000473626 C14orf37Q86TY3 774 aa11.14□□□□□ -0.63
CNOT9-206ENST00000473626 IFFO2Q5TF58 517 aa11.13□□□□□ -0.63
CNOT9-206ENST00000473626 TBC1D2BQ9UPU7 963 aa11.13□□□□□ -0.63
CNOT9-206ENST00000473626 UBTFP17480 764 aaKnown RBP11.12□□□□□ -0.63
CNOT9-206ENST00000473626 GGCXP38435 758 aa11.12□□□□□ -0.63
CNOT9-206ENST00000473626 GDPD2Q9HCC8 539 aa11.12□□□□□ -0.63
CNOT9-206ENST00000473626 ANKLE1Q8NAG6 615 aa11.11□□□□□ -0.63
CNOT9-206ENST00000473626 EMID1Q96A84 441 aaPredicted RBP11.11□□□□□ -0.63
CNOT9-206ENST00000473626 COG6Q9Y2V7 657 aa11.11□□□□□ -0.63
CNOT9-206ENST00000473626 A0A0G2JS52 829 aa11.1□□□□□ -0.63
CNOT9-206ENST00000473626 UNC93B1Q9H1C4 597 aa11.1□□□□□ -0.63
CNOT9-206ENST00000473626 GPR37L1O60883 481 aa11.09□□□□□ -0.63
CNOT9-206ENST00000473626 ABL2P42684 1182 aa11.07□□□□□ -0.64
CNOT9-206ENST00000473626 LINC01559Q495D7 138 aa11.07□□□□□ -0.64
CNOT9-206ENST00000473626 LIAT1Q6ZQX7 453 aa11.07□□□□□ -0.64
CNOT9-206ENST00000473626 BAP1Q92560 729 aa11.06□□□□□ -0.64
CNOT9-206ENST00000473626 NDUFB9Q9Y6M9 179 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms