RNA–Protein interactions for RNA: ENST00000473036.2

TPM3-216, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 746 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-216ENST00000473036 LRPPRCP42704 1394 aaKnown RBP19.03■□□□□ 0.64
TPM3-216ENST00000473036 KNDC1Q76NI1 1749 aa19.03■□□□□ 0.64
TPM3-216ENST00000473036 NALCNQ8IZF0 1738 aa19.03■□□□□ 0.64
TPM3-216ENST00000473036 TECPR2O15040 1411 aa19.02■□□□□ 0.64
TPM3-216ENST00000473036 YTHDC2Q9H6S0 1430 aaKnown RBP19.02■□□□□ 0.64
TPM3-216ENST00000473036 UPF1Q92900 1129 aaKnown RBP eCLIP19.01■□□□□ 0.63
TPM3-216ENST00000473036 STK26Q9P289 416 aa19.01■□□□□ 0.63
TPM3-216ENST00000473036 STAC3Q96MF2 364 aa19■□□□□ 0.63
TPM3-216ENST00000473036 ABCC11Q96J66 1382 aa19■□□□□ 0.63
TPM3-216ENST00000473036 PLEKHH1Q9ULM0 1364 aa19■□□□□ 0.63
TPM3-216ENST00000473036 RXRBP28702 533 aa18.99■□□□□ 0.63
TPM3-216ENST00000473036 WAPLQ7Z5K2 1190 aa18.99■□□□□ 0.63
TPM3-216ENST00000473036 BRINP3Q76B58 766 aa18.98■□□□□ 0.63
TPM3-216ENST00000473036 KIAA1210Q9ULL0 1709 aa18.97■□□□□ 0.63
TPM3-216ENST00000473036 NBPF1Q3BBV0 1214 aa18.97■□□□□ 0.63
TPM3-216ENST00000473036 ADGRL3Q9HAR2 1447 aa18.96■□□□□ 0.63
TPM3-216ENST00000473036 NBPF8Q3BBV2 869 aa18.95■□□□□ 0.62
TPM3-216ENST00000473036 LRRC59Q96AG4 307 aaKnown RBP18.93■□□□□ 0.62
TPM3-216ENST00000473036 TRPM1Q7Z4N2 1603 aa18.92■□□□□ 0.62
TPM3-216ENST00000473036 DLC1Q96QB1 1528 aa18.92■□□□□ 0.62
TPM3-216ENST00000473036 MST1RQ04912 1400 aa18.91■□□□□ 0.62
TPM3-216ENST00000473036 SIRT1Q96EB6 747 aa18.91■□□□□ 0.62
TPM3-216ENST00000473036 TRAK1Q9UPV9 953 aa18.91■□□□□ 0.62
TPM3-216ENST00000473036 NHSL1Q5SYE7 1610 aa18.91■□□□□ 0.62
TPM3-216ENST00000473036 ARHGEF28Q8N1W1 1705 aaKnown RBP18.91■□□□□ 0.62
TPM3-216ENST00000473036 PRAM1Q96QH2 718 aa18.89■□□□□ 0.61
TPM3-216ENST00000473036 AFF2P51816 1311 aa18.89■□□□□ 0.61
TPM3-216ENST00000473036 TONSLQ96HA7 1378 aa18.89■□□□□ 0.61
TPM3-216ENST00000473036 NUTM2BA6NNL0 878 aaPredicted RBP18.87■□□□□ 0.61
TPM3-216ENST00000473036 NUTM2EB1AL46 878 aaPredicted RBP18.87■□□□□ 0.61
TPM3-216ENST00000473036 SAFB2Q14151 953 aaKnown RBP eCLIP18.87■□□□□ 0.61
TPM3-216ENST00000473036 NUTM2AQ8IVF1 878 aaPredicted RBP18.87■□□□□ 0.61
TPM3-216ENST00000473036 CDC42BPGQ6DT37 1551 aa18.86■□□□□ 0.61
TPM3-216ENST00000473036 CLSPNQ9HAW4 1339 aa18.86■□□□□ 0.61
TPM3-216ENST00000473036 RBM6P78332 1123 aaKnown RBP18.86■□□□□ 0.61
TPM3-216ENST00000473036 CCER1Q8TC90 406 aaPredicted RBP18.84■□□□□ 0.61
TPM3-216ENST00000473036 C1orf167Q5SNV9 1468 aa18.84■□□□□ 0.61
TPM3-216ENST00000473036 FMN2Q9NZ56 1722 aa18.83■□□□□ 0.61
TPM3-216ENST00000473036 PNPLA6Q8IY17 1366 aa18.83■□□□□ 0.61
TPM3-216ENST00000473036 NGLY1Q96IV0 654 aa18.83■□□□□ 0.6
TPM3-216ENST00000473036 QTRT2Q9H974 415 aaKnown RBP18.82■□□□□ 0.6
TPM3-216ENST00000473036 RGPD8O14715 1765 aaPredicted RBP18.82■□□□□ 0.6
TPM3-216ENST00000473036 GPRASP1Q5JY77 1395 aa18.81■□□□□ 0.6
TPM3-216ENST00000473036 ADGRB2O60241 1585 aa18.81■□□□□ 0.6
TPM3-216ENST00000473036 POGKQ9P215 609 aa18.81■□□□□ 0.6
TPM3-216ENST00000473036 RGS12O14924 1447 aa18.81■□□□□ 0.6
TPM3-216ENST00000473036 SRCAPQ6ZRS2 3230 aa18.81■□□□□ 0.6
TPM3-216ENST00000473036 RALGAPBQ86X10 1494 aa18.8■□□□□ 0.6
TPM3-216ENST00000473036 C8orf37Q96NL8 207 aa18.8■□□□□ 0.6
TPM3-216ENST00000473036 ORAI2Q96SN7 254 aa18.8■□□□□ 0.6
TPM3-216ENST00000473036 HIRIP3Q9BW71 556 aaPredicted RBP18.8■□□□□ 0.6
TPM3-216ENST00000473036 USP32Q8NFA0 1604 aa18.8■□□□□ 0.6
TPM3-216ENST00000473036 MINK1Q8N4C8 1332 aaPredicted RBP18.79■□□□□ 0.6
TPM3-216ENST00000473036 NUTM2FA1L443 756 aa18.79■□□□□ 0.6
TPM3-216ENST00000473036 DDX17Q92841 729 aaKnown RBP18.79■□□□□ 0.6
TPM3-216ENST00000473036 ROCK2O75116 1388 aaKnown RBP18.79■□□□□ 0.6
TPM3-216ENST00000473036 ATAD2Q6PL18 1390 aa18.77■□□□□ 0.6
TPM3-216ENST00000473036 SOS2Q07890 1332 aaPredicted RBP18.75■□□□□ 0.59
TPM3-216ENST00000473036 QRICH2Q9H0J4 1663 aa18.75■□□□□ 0.59
TPM3-216ENST00000473036 PRR36Q9H6K5 1346 aa18.74■□□□□ 0.59
TPM3-216ENST00000473036 WASLO00401 505 aaPredicted RBP18.73■□□□□ 0.59
TPM3-216ENST00000473036 FNBP4Q8N3X1 1017 aaPredicted RBP18.73■□□□□ 0.59
TPM3-216ENST00000473036 TRPC5Q9UL62 973 aaPredicted RBP18.73■□□□□ 0.59
TPM3-216ENST00000473036 TIMELESSQ9UNS1 1208 aa18.73■□□□□ 0.59
TPM3-216ENST00000473036 CENPJQ9HC77 1338 aaPredicted RBP18.72■□□□□ 0.59
TPM3-216ENST00000473036 ESCO1Q5FWF5 840 aa18.71■□□□□ 0.59
TPM3-216ENST00000473036 CCDC125Q86Z20 511 aa18.71■□□□□ 0.59
TPM3-216ENST00000473036 CARD11Q9BXL7 1154 aa18.71■□□□□ 0.59
TPM3-216ENST00000473036 COL22A1Q8NFW1 1626 aaPredicted RBP18.71■□□□□ 0.58
TPM3-216ENST00000473036 TULP4Q9NRJ4 1543 aa18.7■□□□□ 0.58
TPM3-216ENST00000473036 USP21Q9UK80 565 aa18.7■□□□□ 0.58
TPM3-216ENST00000473036 ADAMTS2O95450 1211 aa18.69■□□□□ 0.58
TPM3-216ENST00000473036 CDK19Q9BWU1 502 aa18.69■□□□□ 0.58
TPM3-216ENST00000473036 ATP7BP35670 1465 aa18.69■□□□□ 0.58
TPM3-216ENST00000473036 ATRNO75882 1429 aa18.67■□□□□ 0.58
TPM3-216ENST00000473036 ANKARQ7Z5J8 1434 aa18.67■□□□□ 0.58
TPM3-216ENST00000473036 PXDNQ92626 1479 aa18.67■□□□□ 0.58
TPM3-216ENST00000473036 NPHP3Q7Z494 1330 aa18.67■□□□□ 0.58
TPM3-216ENST00000473036 EP400Q96L91 3159 aa18.67■□□□□ 0.58
TPM3-216ENST00000473036 FOXO3O43524 673 aa18.66■□□□□ 0.58
TPM3-216ENST00000473036 XPCQ01831 940 aaPredicted RBP18.65■□□□□ 0.58
TPM3-216ENST00000473036 NUDT16Q96DE0 195 aaKnown RBP18.65■□□□□ 0.58
TPM3-216ENST00000473036 ZRANB1Q9UGI0 708 aa18.65■□□□□ 0.58
TPM3-216ENST00000473036 KIF1AQ12756 1690 aa18.65■□□□□ 0.58
TPM3-216ENST00000473036 TOPAZ1Q8N9V7 1692 aa18.65■□□□□ 0.58
TPM3-216ENST00000473036 PMFBP1Q8TBY8 1022 aa18.64■□□□□ 0.57
TPM3-216ENST00000473036 PHF8Q9UPP1 1060 aa18.64■□□□□ 0.57
TPM3-216ENST00000473036 CABP2Q9NPB3 220 aa18.63■□□□□ 0.57
TPM3-216ENST00000473036 EIF3AQ14152 1382 aaKnown RBP18.61■□□□□ 0.57
TPM3-216ENST00000473036 TESK2Q96S53 571 aa18.61■□□□□ 0.57
TPM3-216ENST00000473036 ITSN1Q15811 1721 aa18.6■□□□□ 0.57
TPM3-216ENST00000473036 SBNO2Q9Y2G9 1366 aa18.6■□□□□ 0.57
TPM3-216ENST00000473036 ST20-MTHFSA0A0A6YYL1 179 aa18.6■□□□□ 0.57
TPM3-216ENST00000473036 BCL9LQ86UU0 1499 aa18.59■□□□□ 0.57
TPM3-216ENST00000473036 TRPM3Q9HCF6 1732 aaPredicted RBP18.59■□□□□ 0.57
TPM3-216ENST00000473036 USP47Q96K76 1375 aa18.58■□□□□ 0.57
TPM3-216ENST00000473036 KRT28Q7Z3Y7 464 aa18.58■□□□□ 0.56
TPM3-216ENST00000473036 SRPK2P78362 688 aaKnown RBP18.57■□□□□ 0.56
TPM3-216ENST00000473036 GJD4Q96KN9 370 aaPredicted RBP18.57■□□□□ 0.56
TPM3-216ENST00000473036 CCDC61Q9Y6R9 512 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms