RNA–Protein interactions for RNA: ENST00000472348.1

PCOLCE-205, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 2

Gene PCOLCE, Length 960 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-205ENST00000472348 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.6■■□□□ 1.21
PCOLCE-205ENST00000472348 PRAM1Q96QH2 718 aa22.59■■□□□ 1.21
PCOLCE-205ENST00000472348 ADGRL3Q9HAR2 1447 aa22.58■■□□□ 1.21
PCOLCE-205ENST00000472348 PUS7Q96PZ0 661 aaKnown RBP22.58■■□□□ 1.21
PCOLCE-205ENST00000472348 POGKQ9P215 609 aa22.58■■□□□ 1.21
PCOLCE-205ENST00000472348 CDC42BPGQ6DT37 1551 aa22.58■■□□□ 1.2
PCOLCE-205ENST00000472348 NALCNQ8IZF0 1738 aa22.57■■□□□ 1.2
PCOLCE-205ENST00000472348 PROSER2Q86WR7 435 aaPredicted RBP22.57■■□□□ 1.2
PCOLCE-205ENST00000472348 ST20-MTHFSA0A0A6YYL1 179 aa22.56■■□□□ 1.2
PCOLCE-205ENST00000472348 TESK2Q96S53 571 aa22.55■■□□□ 1.2
PCOLCE-205ENST00000472348 TMEM94Q12767 1356 aa22.54■■□□□ 1.2
PCOLCE-205ENST00000472348 UBAP1LF5GYI3 381 aa22.54■■□□□ 1.2
PCOLCE-205ENST00000472348 PLEKHH1Q9ULM0 1364 aa22.53■■□□□ 1.2
PCOLCE-205ENST00000472348 HSPA5P11021 654 aaKnown RBP22.53■■□□□ 1.2
PCOLCE-205ENST00000472348 WAPLQ7Z5K2 1190 aa22.53■■□□□ 1.2
PCOLCE-205ENST00000472348 C19orf44Q9H6X5 657 aa22.53■■□□□ 1.2
PCOLCE-205ENST00000472348 FMN2Q9NZ56 1722 aa22.51■■□□□ 1.19
PCOLCE-205ENST00000472348 CDCA8Q53HL2 280 aa22.5■■□□□ 1.19
PCOLCE-205ENST00000472348 EVC2Q86UK5 1308 aa22.49■■□□□ 1.19
PCOLCE-205ENST00000472348 MSH6P52701 1360 aa22.49■■□□□ 1.19
PCOLCE-205ENST00000472348 TULP4Q9NRJ4 1543 aa22.48■■□□□ 1.19
PCOLCE-205ENST00000472348 TMF1P82094 1093 aa22.48■■□□□ 1.19
PCOLCE-205ENST00000472348 ANKARQ7Z5J8 1434 aa22.48■■□□□ 1.19
PCOLCE-205ENST00000472348 WASLO00401 505 aaPredicted RBP22.46■■□□□ 1.19
PCOLCE-205ENST00000472348 ITSN1Q15811 1721 aa22.45■■□□□ 1.19
PCOLCE-205ENST00000472348 CADPS2Q86UW7 1296 aa22.45■■□□□ 1.18
PCOLCE-205ENST00000472348 MINK1Q8N4C8 1332 aaPredicted RBP22.43■■□□□ 1.18
PCOLCE-205ENST00000472348 SCAF1Q9H7N4 1312 aaKnown RBP22.43■■□□□ 1.18
PCOLCE-205ENST00000472348 RBM33Q96EV2 1170 aaKnown RBP22.43■■□□□ 1.18
PCOLCE-205ENST00000472348 ATAD2Q6PL18 1390 aa22.42■■□□□ 1.18
PCOLCE-205ENST00000472348 NINLQ9Y2I6 1382 aa22.42■■□□□ 1.18
PCOLCE-205ENST00000472348 PIP4K2BP78356 416 aa22.42■■□□□ 1.18
PCOLCE-205ENST00000472348 SAFB2Q14151 953 aaKnown RBP eCLIP22.41■■□□□ 1.18
PCOLCE-205ENST00000472348 TOPAZ1Q8N9V7 1692 aa22.41■■□□□ 1.18
PCOLCE-205ENST00000472348 TOM1O60784 492 aa22.4■■□□□ 1.18
PCOLCE-205ENST00000472348 C14orf37Q86TY3 774 aa22.4■■□□□ 1.18
PCOLCE-205ENST00000472348 USP32Q8NFA0 1604 aa22.39■■□□□ 1.18
PCOLCE-205ENST00000472348 ATF3P18847 181 aa22.39■■□□□ 1.17
PCOLCE-205ENST00000472348 CDK19Q9BWU1 502 aa22.39■■□□□ 1.17
PCOLCE-205ENST00000472348 ATP7BP35670 1465 aa22.39■■□□□ 1.17
PCOLCE-205ENST00000472348 MST1RQ04912 1400 aa22.38■■□□□ 1.17
PCOLCE-205ENST00000472348 DISP3Q9P2K9 1392 aa22.38■■□□□ 1.17
PCOLCE-205ENST00000472348 KIF1AQ12756 1690 aa22.36■■□□□ 1.17
PCOLCE-205ENST00000472348 CCDC61Q9Y6R9 512 aa22.36■■□□□ 1.17
PCOLCE-205ENST00000472348 RGPD8O14715 1765 aaPredicted RBP22.35■■□□□ 1.17
PCOLCE-205ENST00000472348 HIRIP3Q9BW71 556 aaPredicted RBP22.35■■□□□ 1.17
PCOLCE-205ENST00000472348 C1orf167Q5SNV9 1468 aa22.34■■□□□ 1.17
PCOLCE-205ENST00000472348 SRPK2P78362 688 aaKnown RBP22.33■■□□□ 1.17
PCOLCE-205ENST00000472348 CCDC7Q96M83 1385 aa22.33■■□□□ 1.17
PCOLCE-205ENST00000472348 MYOM1P52179 1685 aa22.33■■□□□ 1.16
PCOLCE-205ENST00000472348 NUDT16Q96DE0 195 aaKnown RBP22.32■■□□□ 1.16
PCOLCE-205ENST00000472348 PLEKHG3A1L390 1219 aa22.31■■□□□ 1.16
PCOLCE-205ENST00000472348 ZNF316A6NFI3 1004 aaPredicted RBP22.31■■□□□ 1.16
PCOLCE-205ENST00000472348 KIF7Q2M1P5 1343 aa22.31■■□□□ 1.16
PCOLCE-205ENST00000472348 PRR36Q9H6K5 1346 aa22.3■■□□□ 1.16
PCOLCE-205ENST00000472348 BRD4O60885 1362 aaPredicted RBP22.29■■□□□ 1.16
PCOLCE-205ENST00000472348 C11orf95C9JLR9 678 aaPredicted RBP22.29■■□□□ 1.16
PCOLCE-205ENST00000472348 CABP2Q9NPB3 220 aa22.29■■□□□ 1.16
PCOLCE-205ENST00000472348 SLAIN2Q9P270 581 aa22.29■■□□□ 1.16
PCOLCE-205ENST00000472348 WASHC2AQ641Q2 1341 aa22.29■■□□□ 1.16
PCOLCE-205ENST00000472348 AKAP12Q02952 1782 aa22.28■■□□□ 1.16
PCOLCE-205ENST00000472348 POLR3AO14802 1390 aaPredicted RBP22.27■■□□□ 1.16
PCOLCE-205ENST00000472348 HSPA1LP34931 641 aa22.27■■□□□ 1.16
PCOLCE-205ENST00000472348 PPIP5K1Q6PFW1 1433 aa22.27■■□□□ 1.16
PCOLCE-205ENST00000472348 ZNF692Q9BU19 519 aaPredicted RBP22.25■■□□□ 1.15
PCOLCE-205ENST00000472348 CPSF1Q10570 1443 aaKnown RBP22.24■■□□□ 1.15
PCOLCE-205ENST00000472348 MON2Q7Z3U7 1717 aa22.24■■□□□ 1.15
PCOLCE-205ENST00000472348 NHSL1Q5SYE7 1610 aa22.24■■□□□ 1.15
PCOLCE-205ENST00000472348 ANKRD36BQ8N2N9 1353 aa22.23■■□□□ 1.15
PCOLCE-205ENST00000472348 TERF2IPQ9NYB0 399 aa22.22■■□□□ 1.15
PCOLCE-205ENST00000472348 PHF8Q9UPP1 1060 aa22.22■■□□□ 1.15
PCOLCE-205ENST00000472348 ROBO1Q9Y6N7 1651 aa22.21■■□□□ 1.15
PCOLCE-205ENST00000472348 CD163L1Q9NR16 1453 aa22.21■■□□□ 1.15
PCOLCE-205ENST00000472348 CABP1Q9NZU7 370 aa22.2■■□□□ 1.14
PCOLCE-205ENST00000472348 AHDC1Q5TGY3 1603 aaPredicted RBP22.2■■□□□ 1.14
PCOLCE-205ENST00000472348 ESCO1Q5FWF5 840 aa22.19■■□□□ 1.14
PCOLCE-205ENST00000472348 BRINP3Q76B58 766 aa22.19■■□□□ 1.14
PCOLCE-205ENST00000472348 NPHP3Q7Z494 1330 aa22.18■■□□□ 1.14
PCOLCE-205ENST00000472348 NRKQ7Z2Y5 1582 aa22.17■■□□□ 1.14
PCOLCE-205ENST00000472348 HDGFL2Q7Z4V5 671 aaPredicted RBP22.17■■□□□ 1.14
PCOLCE-205ENST00000472348 ORAI2Q96SN7 254 aa22.17■■□□□ 1.14
PCOLCE-205ENST00000472348 SLC12A5Q9H2X9 1139 aa22.17■■□□□ 1.14
PCOLCE-205ENST00000472348 ACEP12821 1306 aa22.16■■□□□ 1.14
PCOLCE-205ENST00000472348 USP6P35125 1406 aa22.15■■□□□ 1.14
PCOLCE-205ENST00000472348 SSH2Q76I76 1423 aa22.15■■□□□ 1.14
PCOLCE-205ENST00000472348 NUTM2FA1L443 756 aa22.15■■□□□ 1.14
PCOLCE-205ENST00000472348 TMC1Q8TDI8 760 aa22.15■■□□□ 1.14
PCOLCE-205ENST00000472348 EDC4Q6P2E9 1401 aaKnown RBP22.14■■□□□ 1.14
PCOLCE-205ENST00000472348 TRPM3Q9HCF6 1732 aaPredicted RBP22.14■■□□□ 1.14
PCOLCE-205ENST00000472348 A0A1W2PP64 1363 aa22.14■■□□□ 1.14
PCOLCE-205ENST00000472348 NGDNQ8NEJ9 315 aaKnown RBP22.13■■□□□ 1.13
PCOLCE-205ENST00000472348 SBNO1A3KN83 1393 aa22.12■■□□□ 1.13
PCOLCE-205ENST00000472348 SOS2Q07890 1332 aaPredicted RBP22.12■■□□□ 1.13
PCOLCE-205ENST00000472348 USP54Q70EL1 1684 aa22.12■■□□□ 1.13
PCOLCE-205ENST00000472348 PXDNQ92626 1479 aa22.12■■□□□ 1.13
PCOLCE-205ENST00000472348 KTN1Q86UP2 1357 aaKnown RBP22.12■■□□□ 1.13
PCOLCE-205ENST00000472348 TTC21AQ8NDW8 1320 aa22.11■■□□□ 1.13
PCOLCE-205ENST00000472348 PSME1Q06323 249 aa22.11■■□□□ 1.13
PCOLCE-205ENST00000472348 NPC1L1Q9UHC9 1359 aa22.11■■□□□ 1.13
PCOLCE-205ENST00000472348 PMFBP1Q8TBY8 1022 aa22.1■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms