RNA–Protein interactions for RNA: ENST00000472027.1

SYN3-211, Transcript of synapsin III, humanhuman

TSL 4

Gene SYN3, Length 595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-211ENST00000472027 POGKQ9P215 609 aa13.22□□□□□ -0.29
SYN3-211ENST00000472027 ADGRB1O14514 1584 aa13.21□□□□□ -0.29
SYN3-211ENST00000472027 NUTM2FA1L443 756 aa13.21□□□□□ -0.29
SYN3-211ENST00000472027 DDX17Q92841 729 aaKnown RBP13.21□□□□□ -0.29
SYN3-211ENST00000472027 KNDC1Q76NI1 1749 aa13.21□□□□□ -0.3
SYN3-211ENST00000472027 PHLPP1O60346 1717 aa13.2□□□□□ -0.3
SYN3-211ENST00000472027 NBPF1Q3BBV0 1214 aa13.2□□□□□ -0.3
SYN3-211ENST00000472027 JCADQ9P266 1359 aa13.2□□□□□ -0.3
SYN3-211ENST00000472027 ESCO1Q5FWF5 840 aa13.19□□□□□ -0.3
SYN3-211ENST00000472027 DLC1Q96QB1 1528 aa13.18□□□□□ -0.3
SYN3-211ENST00000472027 AHDC1Q5TGY3 1603 aaPredicted RBP13.18□□□□□ -0.3
SYN3-211ENST00000472027 PCGF6Q9BYE7 350 aa13.18□□□□□ -0.3
SYN3-211ENST00000472027 MED1Q15648 1581 aaPredicted RBP13.18□□□□□ -0.3
SYN3-211ENST00000472027 CDC42BPGQ6DT37 1551 aa13.17□□□□□ -0.3
SYN3-211ENST00000472027 LRRC59Q96AG4 307 aaKnown RBP13.17□□□□□ -0.3
SYN3-211ENST00000472027 COL16A1Q07092 1604 aaPredicted RBP13.17□□□□□ -0.3
SYN3-211ENST00000472027 PHF23Q9BUL5 403 aaPredicted RBP13.16□□□□□ -0.3
SYN3-211ENST00000472027 HIRIP3Q9BW71 556 aaPredicted RBP13.16□□□□□ -0.3
SYN3-211ENST00000472027 MINK1Q8N4C8 1332 aaPredicted RBP13.15□□□□□ -0.3
SYN3-211ENST00000472027 ILDR2Q71H61 639 aa13.15□□□□□ -0.3
SYN3-211ENST00000472027 SOS2Q07890 1332 aaPredicted RBP13.14□□□□□ -0.31
SYN3-211ENST00000472027 FOXO3O43524 673 aa13.14□□□□□ -0.31
SYN3-211ENST00000472027 SPATA31A6Q5VVP1 1343 aa13.13□□□□□ -0.31
SYN3-211ENST00000472027 WASLO00401 505 aaPredicted RBP13.13□□□□□ -0.31
SYN3-211ENST00000472027 NBPF8Q3BBV2 869 aa13.13□□□□□ -0.31
SYN3-211ENST00000472027 KIAA1210Q9ULL0 1709 aa13.13□□□□□ -0.31
SYN3-211ENST00000472027 NHSL1Q5SYE7 1610 aa13.13□□□□□ -0.31
SYN3-211ENST00000472027 NPHP3Q7Z494 1330 aa13.13□□□□□ -0.31
SYN3-211ENST00000472027 TONSLQ96HA7 1378 aa13.12□□□□□ -0.31
SYN3-211ENST00000472027 PHF8Q9UPP1 1060 aa13.12□□□□□ -0.31
SYN3-211ENST00000472027 FMN2Q9NZ56 1722 aa13.11□□□□□ -0.31
SYN3-211ENST00000472027 NUTM2BA6NNL0 878 aaPredicted RBP13.11□□□□□ -0.31
SYN3-211ENST00000472027 NUTM2EB1AL46 878 aaPredicted RBP13.11□□□□□ -0.31
SYN3-211ENST00000472027 XPCQ01831 940 aaPredicted RBP13.11□□□□□ -0.31
SYN3-211ENST00000472027 NUTM2AQ8IVF1 878 aaPredicted RBP13.11□□□□□ -0.31
SYN3-211ENST00000472027 RGS17Q9UGC6 210 aaPredicted RBP13.11□□□□□ -0.31
SYN3-211ENST00000472027 PNPLA6Q8IY17 1366 aa13.09□□□□□ -0.31
SYN3-211ENST00000472027 MEX3CQ5U5Q3 659 aaKnown RBP13.09□□□□□ -0.31
SYN3-211ENST00000472027 KRT28Q7Z3Y7 464 aa13.09□□□□□ -0.31
SYN3-211ENST00000472027 PMFBP1Q8TBY8 1022 aa13.09□□□□□ -0.31
SYN3-211ENST00000472027 CDK19Q9BWU1 502 aa13.09□□□□□ -0.31
SYN3-211ENST00000472027 PRR36Q9H6K5 1346 aa13.09□□□□□ -0.31
SYN3-211ENST00000472027 ROCK2O75116 1388 aaKnown RBP13.08□□□□□ -0.31
SYN3-211ENST00000472027 ARHGEF28Q8N1W1 1705 aaKnown RBP13.08□□□□□ -0.32
SYN3-211ENST00000472027 ADGRB2O60241 1585 aa13.08□□□□□ -0.32
SYN3-211ENST00000472027 ANKARQ7Z5J8 1434 aa13.08□□□□□ -0.32
SYN3-211ENST00000472027 SHPRHQ149N8 1683 aa13.08□□□□□ -0.32
SYN3-211ENST00000472027 CENPJQ9HC77 1338 aaPredicted RBP13.08□□□□□ -0.32
SYN3-211ENST00000472027 EIF3AQ14152 1382 aaKnown RBP13.07□□□□□ -0.32
SYN3-211ENST00000472027 LRP6O75581 1613 aa13.07□□□□□ -0.32
SYN3-211ENST00000472027 PSME1Q06323 249 aa13.07□□□□□ -0.32
SYN3-211ENST00000472027 PXDNQ92626 1479 aa13.07□□□□□ -0.32
SYN3-211ENST00000472027 NUDT16Q96DE0 195 aaKnown RBP13.06□□□□□ -0.32
SYN3-211ENST00000472027 TRPM1Q7Z4N2 1603 aa13.06□□□□□ -0.32
SYN3-211ENST00000472027 RGPD8O14715 1765 aaPredicted RBP13.05□□□□□ -0.32
SYN3-211ENST00000472027 TULP4Q9NRJ4 1543 aa13.05□□□□□ -0.32
SYN3-211ENST00000472027 POTEAQ6S8J7 498 aa13.05□□□□□ -0.32
SYN3-211ENST00000472027 SPATA31A3Q5VYP0 1347 aa13.05□□□□□ -0.32
SYN3-211ENST00000472027 USP32Q8NFA0 1604 aa13.05□□□□□ -0.32
SYN3-211ENST00000472027 ADAMTS2O95450 1211 aa13.04□□□□□ -0.32
SYN3-211ENST00000472027 CARD11Q9BXL7 1154 aa13.04□□□□□ -0.32
SYN3-211ENST00000472027 KIF1AQ12756 1690 aa13.04□□□□□ -0.32
SYN3-211ENST00000472027 SRPK2P78362 688 aaKnown RBP13.03□□□□□ -0.32
SYN3-211ENST00000472027 NGDNQ8NEJ9 315 aaKnown RBP13.03□□□□□ -0.32
SYN3-211ENST00000472027 CCDC61Q9Y6R9 512 aa13.03□□□□□ -0.32
SYN3-211ENST00000472027 CLSPNQ9HAW4 1339 aa13.03□□□□□ -0.32
SYN3-211ENST00000472027 GPRASP1Q5JY77 1395 aa13.03□□□□□ -0.32
SYN3-211ENST00000472027 ZNF772Q68DY9 489 aaPredicted RBP13.02□□□□□ -0.33
SYN3-211ENST00000472027 C8orf37Q96NL8 207 aa13.02□□□□□ -0.33
SYN3-211ENST00000472027 CABP2Q9NPB3 220 aa13.02□□□□□ -0.33
SYN3-211ENST00000472027 LMOD2Q6P5Q4 547 aa13.01□□□□□ -0.33
SYN3-211ENST00000472027 TIMELESSQ9UNS1 1208 aa13.01□□□□□ -0.33
SYN3-211ENST00000472027 SBNO1A3KN83 1393 aa13.01□□□□□ -0.33
SYN3-211ENST00000472027 ATP7BP35670 1465 aa13.01□□□□□ -0.33
SYN3-211ENST00000472027 AFF2P51816 1311 aa13□□□□□ -0.33
SYN3-211ENST00000472027 EVC2Q86UK5 1308 aa13□□□□□ -0.33
SYN3-211ENST00000472027 PLEKHG3A1L390 1219 aa13□□□□□ -0.33
SYN3-211ENST00000472027 SOCS7O14512 581 aa13□□□□□ -0.33
SYN3-211ENST00000472027 CCER1Q8TC90 406 aaPredicted RBP13□□□□□ -0.33
SYN3-211ENST00000472027 NGLY1Q96IV0 654 aa13□□□□□ -0.33
SYN3-211ENST00000472027 RALGAPBQ86X10 1494 aa12.99□□□□□ -0.33
SYN3-211ENST00000472027 TNS3Q68CZ2 1445 aa12.99□□□□□ -0.33
SYN3-211ENST00000472027 ACEP12821 1306 aa12.99□□□□□ -0.33
SYN3-211ENST00000472027 COL22A1Q8NFW1 1626 aaPredicted RBP12.99□□□□□ -0.33
SYN3-211ENST00000472027 PAK3O75914 559 aaPredicted RBP12.98□□□□□ -0.33
SYN3-211ENST00000472027 PLEKHG5O94827 1062 aa12.98□□□□□ -0.33
SYN3-211ENST00000472027 CABLES1Q8TDN4 633 aa12.98□□□□□ -0.33
SYN3-211ENST00000472027 ARHGEF10O15013 1369 aa12.97□□□□□ -0.33
SYN3-211ENST00000472027 QRICH2Q9H0J4 1663 aa12.97□□□□□ -0.33
SYN3-211ENST00000472027 CABP1Q9NZU7 370 aa12.97□□□□□ -0.33
SYN3-211ENST00000472027 POLR3AO14802 1390 aaPredicted RBP12.96□□□□□ -0.33
SYN3-211ENST00000472027 HAP1P54257 671 aaPredicted RBP12.96□□□□□ -0.33
SYN3-211ENST00000472027 FNBP4Q8N3X1 1017 aaPredicted RBP12.96□□□□□ -0.33
SYN3-211ENST00000472027 QTRT2Q9H974 415 aaKnown RBP12.96□□□□□ -0.33
SYN3-211ENST00000472027 PPIP5K1Q6PFW1 1433 aa12.96□□□□□ -0.34
SYN3-211ENST00000472027 RXRBP28702 533 aa12.95□□□□□ -0.34
SYN3-211ENST00000472027 USP21Q9UK80 565 aa12.95□□□□□ -0.34
SYN3-211ENST00000472027 ST20-MTHFSA0A0A6YYL1 179 aa12.94□□□□□ -0.34
SYN3-211ENST00000472027 SBNO2Q9Y2G9 1366 aa12.94□□□□□ -0.34
SYN3-211ENST00000472027 ITSN1Q15811 1721 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 6.9 ms