RNA–Protein interactions for RNA: ENST00000472024.2

CHMP2B-204, Transcript of charged multivesicular body protein 2B, humanhuman

TSL 5

Gene CHMP2B, Length 836 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-204ENST00000472024 PLEKHH1Q9ULM0 1364 aa27.13■■□□□ 1.93
CHMP2B-204ENST00000472024 NKTRP30414 1462 aaKnown RBP27.13■■□□□ 1.93
CHMP2B-204ENST00000472024 TULP4Q9NRJ4 1543 aa27.12■■□□□ 1.93
CHMP2B-204ENST00000472024 CDCA8Q53HL2 280 aa27.1■■□□□ 1.93
CHMP2B-204ENST00000472024 POGKQ9P215 609 aa27.1■■□□□ 1.93
CHMP2B-204ENST00000472024 WAPLQ7Z5K2 1190 aa27.08■■□□□ 1.93
CHMP2B-204ENST00000472024 DMRT2Q9Y5R5 561 aa27.07■■□□□ 1.92
CHMP2B-204ENST00000472024 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.07■■□□□ 1.92
CHMP2B-204ENST00000472024 EVC2Q86UK5 1308 aa27.05■■□□□ 1.92
CHMP2B-204ENST00000472024 STRCP1A6NGW2 1772 aa27.02■■□□□ 1.92
CHMP2B-204ENST00000472024 NCOA3Q9Y6Q9 1424 aa27.02■■□□□ 1.92
CHMP2B-204ENST00000472024 MYOM1P52179 1685 aa26.99■■□□□ 1.91
CHMP2B-204ENST00000472024 MINK1Q8N4C8 1332 aaPredicted RBP26.99■■□□□ 1.91
CHMP2B-204ENST00000472024 SAFB2Q14151 953 aaKnown RBP eCLIP26.98■■□□□ 1.91
CHMP2B-204ENST00000472024 ADGRL3Q9HAR2 1447 aa26.97■■□□□ 1.91
CHMP2B-204ENST00000472024 CDC42BPGQ6DT37 1551 aa26.97■■□□□ 1.91
CHMP2B-204ENST00000472024 WASLO00401 505 aaPredicted RBP26.96■■□□□ 1.91
CHMP2B-204ENST00000472024 ATAD2Q6PL18 1390 aa26.96■■□□□ 1.91
CHMP2B-204ENST00000472024 NINLQ9Y2I6 1382 aa26.96■■□□□ 1.91
CHMP2B-204ENST00000472024 NALCNQ8IZF0 1738 aa26.94■■□□□ 1.9
CHMP2B-204ENST00000472024 DDX10Q13206 875 aaKnown RBP26.94■■□□□ 1.9
CHMP2B-204ENST00000472024 FBXO41Q8TF61 875 aa26.94■■□□□ 1.9
CHMP2B-204ENST00000472024 CDK19Q9BWU1 502 aa26.93■■□□□ 1.9
CHMP2B-204ENST00000472024 ATP7BP35670 1465 aa26.9■■□□□ 1.9
CHMP2B-204ENST00000472024 DIEXFQ68CQ4 756 aaKnown RBP26.89■■□□□ 1.9
CHMP2B-204ENST00000472024 ANKARQ7Z5J8 1434 aa26.89■■□□□ 1.89
CHMP2B-204ENST00000472024 FMN2Q9NZ56 1722 aa26.88■■□□□ 1.89
CHMP2B-204ENST00000472024 CABP2Q9NPB3 220 aa26.88■■□□□ 1.89
CHMP2B-204ENST00000472024 DCCP43146 1447 aa26.88■■□□□ 1.89
CHMP2B-204ENST00000472024 LRRC7Q96NW7 1537 aa26.87■■□□□ 1.89
CHMP2B-204ENST00000472024 PROSER2Q86WR7 435 aaPredicted RBP26.87■■□□□ 1.89
CHMP2B-204ENST00000472024 TMEM94Q12767 1356 aa26.86■■□□□ 1.89
CHMP2B-204ENST00000472024 TOPAZ1Q8N9V7 1692 aa26.86■■□□□ 1.89
CHMP2B-204ENST00000472024 SRPK2P78362 688 aaKnown RBP26.86■■□□□ 1.89
CHMP2B-204ENST00000472024 ZNF335Q9H4Z2 1342 aaPredicted RBP26.86■■□□□ 1.89
CHMP2B-204ENST00000472024 USP32Q8NFA0 1604 aa26.85■■□□□ 1.89
CHMP2B-204ENST00000472024 POLR3GLQ9BT43 218 aa26.83■■□□□ 1.89
CHMP2B-204ENST00000472024 PRR36Q9H6K5 1346 aa26.83■■□□□ 1.89
CHMP2B-204ENST00000472024 XIRP1Q702N8 1843 aaKnown RBP26.83■■□□□ 1.89
CHMP2B-204ENST00000472024 LTBP4Q8N2S1 1624 aa26.81■■□□□ 1.88
CHMP2B-204ENST00000472024 PER1O15534 1290 aaPredicted RBP26.81■■□□□ 1.88
CHMP2B-204ENST00000472024 NUDT16Q96DE0 195 aaKnown RBP26.81■■□□□ 1.88
CHMP2B-204ENST00000472024 ANKRD36BQ8N2N9 1353 aa26.81■■□□□ 1.88
CHMP2B-204ENST00000472024 CD163L1Q9NR16 1453 aa26.81■■□□□ 1.88
CHMP2B-204ENST00000472024 C19orf44Q9H6X5 657 aa26.8■■□□□ 1.88
CHMP2B-204ENST00000472024 CCDC61Q9Y6R9 512 aa26.8■■□□□ 1.88
CHMP2B-204ENST00000472024 PANK3Q9H999 370 aa26.79■■□□□ 1.88
CHMP2B-204ENST00000472024 ITSN1Q15811 1721 aa26.79■■□□□ 1.88
CHMP2B-204ENST00000472024 SLC12A5Q9H2X9 1139 aa26.77■■□□□ 1.88
CHMP2B-204ENST00000472024 CPSF1Q10570 1443 aaKnown RBP26.76■■□□□ 1.87
CHMP2B-204ENST00000472024 PPIP5K1Q6PFW1 1433 aa26.76■■□□□ 1.87
CHMP2B-204ENST00000472024 PLEKHG3A1L390 1219 aa26.76■■□□□ 1.87
CHMP2B-204ENST00000472024 NPC1L1Q9UHC9 1359 aa26.75■■□□□ 1.87
CHMP2B-204ENST00000472024 RBM33Q96EV2 1170 aaKnown RBP26.73■■□□□ 1.87
CHMP2B-204ENST00000472024 A0A1W2PP64 1363 aa26.72■■□□□ 1.87
CHMP2B-204ENST00000472024 TMC1Q8TDI8 760 aa26.72■■□□□ 1.87
CHMP2B-204ENST00000472024 CABP1Q9NZU7 370 aa26.72■■□□□ 1.87
CHMP2B-204ENST00000472024 MSH6P52701 1360 aa26.71■■□□□ 1.87
CHMP2B-204ENST00000472024 CARD14Q9BXL6 1004 aa26.71■■□□□ 1.87
CHMP2B-204ENST00000472024 TERF2IPQ9NYB0 399 aa26.71■■□□□ 1.87
CHMP2B-204ENST00000472024 POLR3AO14802 1390 aaPredicted RBP26.71■■□□□ 1.87
CHMP2B-204ENST00000472024 AKAP12Q02952 1782 aa26.7■■□□□ 1.86
CHMP2B-204ENST00000472024 MST1RQ04912 1400 aa26.7■■□□□ 1.86
CHMP2B-204ENST00000472024 C14orf37Q86TY3 774 aa26.69■■□□□ 1.86
CHMP2B-204ENST00000472024 MON2Q7Z3U7 1717 aa26.68■■□□□ 1.86
CHMP2B-204ENST00000472024 CADPS2Q86UW7 1296 aa26.68■■□□□ 1.86
CHMP2B-204ENST00000472024 C1orf167Q5SNV9 1468 aa26.68■■□□□ 1.86
CHMP2B-204ENST00000472024 RGPD8O14715 1765 aaPredicted RBP26.67■■□□□ 1.86
CHMP2B-204ENST00000472024 KTN1Q86UP2 1357 aaKnown RBP26.67■■□□□ 1.86
CHMP2B-204ENST00000472024 AMER1Q5JTC6 1135 aaPredicted RBP26.66■■□□□ 1.86
CHMP2B-204ENST00000472024 NSD3Q9BZ95 1437 aa26.65■■□□□ 1.86
CHMP2B-204ENST00000472024 HDGFL2Q7Z4V5 671 aaPredicted RBP26.65■■□□□ 1.86
CHMP2B-204ENST00000472024 ZNF692Q9BU19 519 aaPredicted RBP26.65■■□□□ 1.86
CHMP2B-204ENST00000472024 ATF3P18847 181 aa26.64■■□□□ 1.86
CHMP2B-204ENST00000472024 KNSTRNQ9Y448 316 aa26.64■■□□□ 1.86
CHMP2B-204ENST00000472024 EDC4Q6P2E9 1401 aaKnown RBP26.64■■□□□ 1.85
CHMP2B-204ENST00000472024 SSH2Q76I76 1423 aa26.64■■□□□ 1.85
CHMP2B-204ENST00000472024 NRKQ7Z2Y5 1582 aa26.63■■□□□ 1.85
CHMP2B-204ENST00000472024 KIF1AQ12756 1690 aa26.63■■□□□ 1.85
CHMP2B-204ENST00000472024 BRD4O60885 1362 aaPredicted RBP26.62■■□□□ 1.85
CHMP2B-204ENST00000472024 NSD2O96028 1365 aa26.62■■□□□ 1.85
CHMP2B-204ENST00000472024 PRKRIP1Q9H875 184 aaPredicted RBP26.61■■□□□ 1.85
CHMP2B-204ENST00000472024 ACEP12821 1306 aa26.61■■□□□ 1.85
CHMP2B-204ENST00000472024 PARD3Q8TEW0 1356 aa26.6■■□□□ 1.85
CHMP2B-204ENST00000472024 USP6P35125 1406 aa26.6■■□□□ 1.85
CHMP2B-204ENST00000472024 ANP32CO43423 234 aa26.6■■□□□ 1.85
CHMP2B-204ENST00000472024 NUTM2FA1L443 756 aa26.59■■□□□ 1.85
CHMP2B-204ENST00000472024 PHF8Q9UPP1 1060 aa26.59■■□□□ 1.85
CHMP2B-204ENST00000472024 IQSEC2Q5JU85 1478 aa26.59■■□□□ 1.85
CHMP2B-204ENST00000472024 CGNL1Q0VF96 1302 aa26.58■■□□□ 1.85
CHMP2B-204ENST00000472024 RALBP1Q15311 655 aa26.56■■□□□ 1.84
CHMP2B-204ENST00000472024 MIER1Q8N108 512 aa26.55■■□□□ 1.84
CHMP2B-204ENST00000472024 ESCO1Q5FWF5 840 aa26.52■■□□□ 1.84
CHMP2B-204ENST00000472024 PMFBP1Q8TBY8 1022 aa26.52■■□□□ 1.84
CHMP2B-204ENST00000472024 ANKRD26Q9UPS8 1709 aa26.52■■□□□ 1.84
CHMP2B-204ENST00000472024 KIF20BQ96Q89 1820 aa26.51■■□□□ 1.83
CHMP2B-204ENST00000472024 TTC21AQ8NDW8 1320 aa26.51■■□□□ 1.83
CHMP2B-204ENST00000472024 NGDNQ8NEJ9 315 aaKnown RBP26.51■■□□□ 1.83
CHMP2B-204ENST00000472024 ORAI2Q96SN7 254 aa26.51■■□□□ 1.83
CHMP2B-204ENST00000472024 TTC21BQ7Z4L5 1316 aa26.5■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms