RNA–Protein interactions for RNA: ENST00000471322.2

HSPG2-208, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 1,602 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-208ENST00000471322 ABCC11Q96J66 1382 aa24.31■■□□□ 1.48
HSPG2-208ENST00000471322 SAFB2Q14151 953 aaKnown RBP eCLIP24.31■■□□□ 1.48
HSPG2-208ENST00000471322 ATF3P18847 181 aa24.3■■□□□ 1.48
HSPG2-208ENST00000471322 NCOA3Q9Y6Q9 1424 aa24.3■■□□□ 1.48
HSPG2-208ENST00000471322 GPRASP1Q5JY77 1395 aa24.29■■□□□ 1.48
HSPG2-208ENST00000471322 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.28■■□□□ 1.48
HSPG2-208ENST00000471322 CCDC7Q96M83 1385 aa24.28■■□□□ 1.48
HSPG2-208ENST00000471322 TECPR2O15040 1411 aa24.28■■□□□ 1.48
HSPG2-208ENST00000471322 PRAM1Q96QH2 718 aa24.27■■□□□ 1.48
HSPG2-208ENST00000471322 SLAIN2Q9P270 581 aa24.27■■□□□ 1.48
HSPG2-208ENST00000471322 NALCNQ8IZF0 1738 aa24.26■■□□□ 1.47
HSPG2-208ENST00000471322 ADGRL3Q9HAR2 1447 aa24.26■■□□□ 1.47
HSPG2-208ENST00000471322 CADPS2Q86UW7 1296 aa24.25■■□□□ 1.47
HSPG2-208ENST00000471322 TRPM1Q7Z4N2 1603 aa24.24■■□□□ 1.47
HSPG2-208ENST00000471322 POGKQ9P215 609 aa24.24■■□□□ 1.47
HSPG2-208ENST00000471322 KNDC1Q76NI1 1749 aa24.24■■□□□ 1.47
HSPG2-208ENST00000471322 ANP32CO43423 234 aa24.23■■□□□ 1.47
HSPG2-208ENST00000471322 C11orf95C9JLR9 678 aaPredicted RBP24.21■■□□□ 1.47
HSPG2-208ENST00000471322 NUTM2FA1L443 756 aa24.21■■□□□ 1.47
HSPG2-208ENST00000471322 HSPA1LP34931 641 aa24.21■■□□□ 1.47
HSPG2-208ENST00000471322 FAM135BQ49AJ0 1406 aa24.2■■□□□ 1.46
HSPG2-208ENST00000471322 KIF7Q2M1P5 1343 aa24.2■■□□□ 1.46
HSPG2-208ENST00000471322 KIAA1210Q9ULL0 1709 aa24.18■■□□□ 1.46
HSPG2-208ENST00000471322 DCCP43146 1447 aa24.18■■□□□ 1.46
HSPG2-208ENST00000471322 ST20-MTHFSA0A0A6YYL1 179 aa24.17■■□□□ 1.46
HSPG2-208ENST00000471322 SIRT1Q96EB6 747 aa24.17■■□□□ 1.46
HSPG2-208ENST00000471322 ROBO1Q9Y6N7 1651 aa24.16■■□□□ 1.46
HSPG2-208ENST00000471322 MINK1Q8N4C8 1332 aaPredicted RBP24.16■■□□□ 1.46
HSPG2-208ENST00000471322 CENPBP07199 599 aaPredicted RBP24.16■■□□□ 1.46
HSPG2-208ENST00000471322 MST1RQ04912 1400 aa24.16■■□□□ 1.46
HSPG2-208ENST00000471322 DLC1Q96QB1 1528 aa24.15■■□□□ 1.46
HSPG2-208ENST00000471322 CCER2I3L3R5 266 aa24.13■■□□□ 1.45
HSPG2-208ENST00000471322 ARHGEF28Q8N1W1 1705 aaKnown RBP24.12■■□□□ 1.45
HSPG2-208ENST00000471322 BRINP3Q76B58 766 aa24.12■■□□□ 1.45
HSPG2-208ENST00000471322 ORAI2Q96SN7 254 aa24.11■■□□□ 1.45
HSPG2-208ENST00000471322 C1orf167Q5SNV9 1468 aa24.1■■□□□ 1.45
HSPG2-208ENST00000471322 DDX17Q92841 729 aaKnown RBP24.1■■□□□ 1.45
HSPG2-208ENST00000471322 CDC42BPGQ6DT37 1551 aa24.09■■□□□ 1.45
HSPG2-208ENST00000471322 ESCO1Q5FWF5 840 aa24.07■■□□□ 1.44
HSPG2-208ENST00000471322 CENPJQ9HC77 1338 aaPredicted RBP24.05■■□□□ 1.44
HSPG2-208ENST00000471322 SLC24A1O60721 1099 aa24.04■■□□□ 1.44
HSPG2-208ENST00000471322 YTHDC1Q96MU7 727 aaKnown RBP24.03■■□□□ 1.44
HSPG2-208ENST00000471322 EIF3AQ14152 1382 aaKnown RBP24.02■■□□□ 1.44
HSPG2-208ENST00000471322 WASLO00401 505 aaPredicted RBP24.02■■□□□ 1.44
HSPG2-208ENST00000471322 TESK2Q96S53 571 aa24.02■■□□□ 1.44
HSPG2-208ENST00000471322 FMN2Q9NZ56 1722 aa24.02■■□□□ 1.43
HSPG2-208ENST00000471322 TMF1P82094 1093 aa24.01■■□□□ 1.43
HSPG2-208ENST00000471322 POLR3GLQ9BT43 218 aa24■■□□□ 1.43
HSPG2-208ENST00000471322 PHLPP1O60346 1717 aa24■■□□□ 1.43
HSPG2-208ENST00000471322 ADGRB2O60241 1585 aa23.99■■□□□ 1.43
HSPG2-208ENST00000471322 FOXO3O43524 673 aa23.98■■□□□ 1.43
HSPG2-208ENST00000471322 XPCQ01831 940 aaPredicted RBP23.98■■□□□ 1.43
HSPG2-208ENST00000471322 CDK19Q9BWU1 502 aa23.98■■□□□ 1.43
HSPG2-208ENST00000471322 RGPD8O14715 1765 aaPredicted RBP23.98■■□□□ 1.43
HSPG2-208ENST00000471322 PRR36Q9H6K5 1346 aa23.97■■□□□ 1.43
HSPG2-208ENST00000471322 QRICH2Q9H0J4 1663 aa23.97■■□□□ 1.43
HSPG2-208ENST00000471322 CDCA8Q53HL2 280 aa23.96■■□□□ 1.43
HSPG2-208ENST00000471322 PMFBP1Q8TBY8 1022 aa23.96■■□□□ 1.43
HSPG2-208ENST00000471322 AHDC1Q5TGY3 1603 aaPredicted RBP23.94■■□□□ 1.42
HSPG2-208ENST00000471322 SRPK2P78362 688 aaKnown RBP23.94■■□□□ 1.42
HSPG2-208ENST00000471322 CABP2Q9NPB3 220 aa23.94■■□□□ 1.42
HSPG2-208ENST00000471322 COL16A1Q07092 1604 aaPredicted RBP23.94■■□□□ 1.42
HSPG2-208ENST00000471322 USP32Q8NFA0 1604 aa23.94■■□□□ 1.42
HSPG2-208ENST00000471322 PRKRIP1Q9H875 184 aaPredicted RBP23.93■■□□□ 1.42
HSPG2-208ENST00000471322 PHF8Q9UPP1 1060 aa23.93■■□□□ 1.42
HSPG2-208ENST00000471322 NUDT16Q96DE0 195 aaKnown RBP23.92■■□□□ 1.42
HSPG2-208ENST00000471322 TULP4Q9NRJ4 1543 aa23.92■■□□□ 1.42
HSPG2-208ENST00000471322 NHSL1Q5SYE7 1610 aa23.91■■□□□ 1.42
HSPG2-208ENST00000471322 ANKARQ7Z5J8 1434 aa23.9■■□□□ 1.42
HSPG2-208ENST00000471322 NPHP3Q7Z494 1330 aa23.89■■□□□ 1.41
HSPG2-208ENST00000471322 DISP3Q9P2K9 1392 aa23.89■■□□□ 1.41
HSPG2-208ENST00000471322 ATP7BP35670 1465 aa23.88■■□□□ 1.41
HSPG2-208ENST00000471322 SOS2Q07890 1332 aaPredicted RBP23.87■■□□□ 1.41
HSPG2-208ENST00000471322 EVC2Q86UK5 1308 aa23.87■■□□□ 1.41
HSPG2-208ENST00000471322 LRRC59Q96AG4 307 aaKnown RBP23.86■■□□□ 1.41
HSPG2-208ENST00000471322 JCADQ9P266 1359 aa23.86■■□□□ 1.41
HSPG2-208ENST00000471322 PSME1Q06323 249 aa23.84■■□□□ 1.41
HSPG2-208ENST00000471322 KRT28Q7Z3Y7 464 aa23.84■■□□□ 1.41
HSPG2-208ENST00000471322 SBNO2Q9Y2G9 1366 aa23.84■■□□□ 1.41
HSPG2-208ENST00000471322 NGDNQ8NEJ9 315 aaKnown RBP23.84■■□□□ 1.41
HSPG2-208ENST00000471322 CCDC61Q9Y6R9 512 aa23.84■■□□□ 1.41
HSPG2-208ENST00000471322 KTN1Q86UP2 1357 aaKnown RBP23.83■■□□□ 1.41
HSPG2-208ENST00000471322 PXDNQ92626 1479 aa23.83■■□□□ 1.41
HSPG2-208ENST00000471322 KIF1AQ12756 1690 aa23.83■■□□□ 1.41
HSPG2-208ENST00000471322 PLEKHG5O94827 1062 aa23.82■■□□□ 1.4
HSPG2-208ENST00000471322 NUTM2BA6NNL0 878 aaPredicted RBP23.81■■□□□ 1.4
HSPG2-208ENST00000471322 NUTM2EB1AL46 878 aaPredicted RBP23.81■■□□□ 1.4
HSPG2-208ENST00000471322 NUTM2AQ8IVF1 878 aaPredicted RBP23.81■■□□□ 1.4
HSPG2-208ENST00000471322 CABP1Q9NZU7 370 aa23.8■■□□□ 1.4
HSPG2-208ENST00000471322 PPIP5K1Q6PFW1 1433 aa23.79■■□□□ 1.4
HSPG2-208ENST00000471322 LMOD2Q6P5Q4 547 aa23.79■■□□□ 1.4
HSPG2-208ENST00000471322 ACEP12821 1306 aa23.78■■□□□ 1.4
HSPG2-208ENST00000471322 PNPLA6Q8IY17 1366 aa23.78■■□□□ 1.4
HSPG2-208ENST00000471322 RALBP1Q15311 655 aa23.77■■□□□ 1.4
HSPG2-208ENST00000471322 MED1Q15648 1581 aaPredicted RBP23.77■■□□□ 1.4
HSPG2-208ENST00000471322 ITSN1Q15811 1721 aa23.77■■□□□ 1.4
HSPG2-208ENST00000471322 TOPAZ1Q8N9V7 1692 aa23.76■■□□□ 1.39
HSPG2-208ENST00000471322 PAK3O75914 559 aaPredicted RBP23.76■■□□□ 1.39
HSPG2-208ENST00000471322 PANK3Q9H999 370 aa23.75■■□□□ 1.39
HSPG2-208ENST00000471322 SHPRHQ149N8 1683 aa23.75■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 100.9 ms