RNA–Protein interactions for RNA: ENST00000471157.2

CDKN1C-205, Transcript of cyclin dependent kinase inhibitor 1C, humanhuman

TSL 2

Gene CDKN1C, Length 944 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1C-205ENST00000471157 DLC1Q96QB1 1528 aa35.72■■■■□ 3.31
CDKN1C-205ENST00000471157 MED1Q15648 1581 aaPredicted RBP35.71■■■■□ 3.31
CDKN1C-205ENST00000471157 COL16A1Q07092 1604 aaPredicted RBP35.69■■■■□ 3.3
CDKN1C-205ENST00000471157 PRAM1Q96QH2 718 aa35.68■■■■□ 3.3
CDKN1C-205ENST00000471157 L3MBTL2Q969R5 705 aa35.67■■■■□ 3.3
CDKN1C-205ENST00000471157 TRAK1Q9UPV9 953 aa35.67■■■■□ 3.3
CDKN1C-205ENST00000471157 POGKQ9P215 609 aa35.65■■■■□ 3.3
CDKN1C-205ENST00000471157 KIAA1210Q9ULL0 1709 aa35.64■■■■□ 3.3
CDKN1C-205ENST00000471157 SAFB2Q14151 953 aaKnown RBP eCLIP35.63■■■■□ 3.29
CDKN1C-205ENST00000471157 NHSL1Q5SYE7 1610 aa35.63■■■■□ 3.29
CDKN1C-205ENST00000471157 JCADQ9P266 1359 aa35.63■■■■□ 3.29
CDKN1C-205ENST00000471157 ORAI2Q96SN7 254 aa35.6■■■■□ 3.29
CDKN1C-205ENST00000471157 FMN2Q9NZ56 1722 aa35.57■■■■□ 3.29
CDKN1C-205ENST00000471157 NUTM2FA1L443 756 aa35.56■■■■□ 3.28
CDKN1C-205ENST00000471157 ESCO1Q5FWF5 840 aa35.55■■■■□ 3.28
CDKN1C-205ENST00000471157 DDX17Q92841 729 aaKnown RBP35.55■■■■□ 3.28
CDKN1C-205ENST00000471157 NBPF1Q3BBV0 1214 aa35.53■■■■□ 3.28
CDKN1C-205ENST00000471157 ARHGEF28Q8N1W1 1705 aaKnown RBP35.52■■■■□ 3.28
CDKN1C-205ENST00000471157 PCGF6Q9BYE7 350 aa35.52■■■■□ 3.28
CDKN1C-205ENST00000471157 PHF23Q9BUL5 403 aaPredicted RBP35.51■■■■□ 3.28
CDKN1C-205ENST00000471157 ADGRB2O60241 1585 aa35.51■■■■□ 3.27
CDKN1C-205ENST00000471157 MINK1Q8N4C8 1332 aaPredicted RBP35.49■■■■□ 3.27
CDKN1C-205ENST00000471157 SHPRHQ149N8 1683 aa35.49■■■■□ 3.27
CDKN1C-205ENST00000471157 LRRC59Q96AG4 307 aaKnown RBP35.48■■■■□ 3.27
CDKN1C-205ENST00000471157 HIRIP3Q9BW71 556 aaPredicted RBP35.47■■■■□ 3.27
CDKN1C-205ENST00000471157 TONSLQ96HA7 1378 aa35.47■■■■□ 3.27
CDKN1C-205ENST00000471157 SPATA31A6Q5VVP1 1343 aa35.46■■■■□ 3.27
CDKN1C-205ENST00000471157 SOS2Q07890 1332 aaPredicted RBP35.44■■■■□ 3.26
CDKN1C-205ENST00000471157 NPHP3Q7Z494 1330 aa35.44■■■■□ 3.26
CDKN1C-205ENST00000471157 TRPM1Q7Z4N2 1603 aa35.43■■■■□ 3.26
CDKN1C-205ENST00000471157 KIF1AQ12756 1690 aa35.4■■■■□ 3.26
CDKN1C-205ENST00000471157 FOXO3O43524 673 aa35.4■■■■□ 3.26
CDKN1C-205ENST00000471157 ANKARQ7Z5J8 1434 aa35.4■■■■□ 3.26
CDKN1C-205ENST00000471157 EIF3AQ14152 1382 aaKnown RBP35.39■■■■□ 3.26
CDKN1C-205ENST00000471157 RGPD8O14715 1765 aaPredicted RBP35.38■■■■□ 3.25
CDKN1C-205ENST00000471157 WASLO00401 505 aaPredicted RBP35.37■■■■□ 3.25
CDKN1C-205ENST00000471157 ILDR2Q71H61 639 aa35.37■■■■□ 3.25
CDKN1C-205ENST00000471157 PNPLA6Q8IY17 1366 aa35.37■■■■□ 3.25
CDKN1C-205ENST00000471157 PHF8Q9UPP1 1060 aa35.36■■■■□ 3.25
CDKN1C-205ENST00000471157 ROCK2O75116 1388 aaKnown RBP35.36■■■■□ 3.25
CDKN1C-205ENST00000471157 LRP6O75581 1613 aa35.35■■■■□ 3.25
CDKN1C-205ENST00000471157 USP32Q8NFA0 1604 aa35.35■■■■□ 3.25
CDKN1C-205ENST00000471157 PXDNQ92626 1479 aa35.35■■■■□ 3.25
CDKN1C-205ENST00000471157 NBPF8Q3BBV2 869 aa35.35■■■■□ 3.25
CDKN1C-205ENST00000471157 TULP4Q9NRJ4 1543 aa35.34■■■■□ 3.25
CDKN1C-205ENST00000471157 XPCQ01831 940 aaPredicted RBP35.33■■■■□ 3.25
CDKN1C-205ENST00000471157 NUTM2BA6NNL0 878 aaPredicted RBP35.32■■■■□ 3.24
CDKN1C-205ENST00000471157 NUTM2EB1AL46 878 aaPredicted RBP35.32■■■■□ 3.24
CDKN1C-205ENST00000471157 NUTM2AQ8IVF1 878 aaPredicted RBP35.32■■■■□ 3.24
CDKN1C-205ENST00000471157 CENPJQ9HC77 1338 aaPredicted RBP35.32■■■■□ 3.24
CDKN1C-205ENST00000471157 MEX3CQ5U5Q3 659 aaKnown RBP35.31■■■■□ 3.24
CDKN1C-205ENST00000471157 PRR36Q9H6K5 1346 aa35.29■■■■□ 3.24
CDKN1C-205ENST00000471157 RGS17Q9UGC6 210 aaPredicted RBP35.27■■■■□ 3.24
CDKN1C-205ENST00000471157 KRT28Q7Z3Y7 464 aa35.25■■■■□ 3.23
CDKN1C-205ENST00000471157 PMFBP1Q8TBY8 1022 aa35.25■■■■□ 3.23
CDKN1C-205ENST00000471157 CDK19Q9BWU1 502 aa35.25■■■■□ 3.23
CDKN1C-205ENST00000471157 GPRASP1Q5JY77 1395 aa35.25■■■■□ 3.23
CDKN1C-205ENST00000471157 QRICH2Q9H0J4 1663 aa35.24■■■■□ 3.23
CDKN1C-205ENST00000471157 ATP7BP35670 1465 aa35.22■■■■□ 3.23
CDKN1C-205ENST00000471157 RALGAPBQ86X10 1494 aa35.22■■■■□ 3.23
CDKN1C-205ENST00000471157 PSME1Q06323 249 aa35.21■■■■□ 3.23
CDKN1C-205ENST00000471157 NUDT16Q96DE0 195 aaKnown RBP35.21■■■■□ 3.23
CDKN1C-205ENST00000471157 CLSPNQ9HAW4 1339 aa35.21■■■■□ 3.23
CDKN1C-205ENST00000471157 COL22A1Q8NFW1 1626 aaPredicted RBP35.21■■■■□ 3.23
CDKN1C-205ENST00000471157 ITSN1Q15811 1721 aa35.19■■■■□ 3.22
CDKN1C-205ENST00000471157 SPATA31A3Q5VYP0 1347 aa35.19■■■■□ 3.22
CDKN1C-205ENST00000471157 CARD11Q9BXL7 1154 aa35.17■■■■□ 3.22
CDKN1C-205ENST00000471157 TNS3Q68CZ2 1445 aa35.15■■■■□ 3.22
CDKN1C-205ENST00000471157 SRPK2P78362 688 aaKnown RBP35.14■■■■□ 3.22
CDKN1C-205ENST00000471157 NGDNQ8NEJ9 315 aaKnown RBP35.14■■■■□ 3.22
CDKN1C-205ENST00000471157 SBNO1A3KN83 1393 aa35.13■■■■□ 3.21
CDKN1C-205ENST00000471157 ADAMTS2O95450 1211 aa35.13■■■■□ 3.21
CDKN1C-205ENST00000471157 POTEAQ6S8J7 498 aa35.11■■■■□ 3.21
CDKN1C-205ENST00000471157 CCDC61Q9Y6R9 512 aa35.11■■■■□ 3.21
CDKN1C-205ENST00000471157 TOPAZ1Q8N9V7 1692 aa35.11■■■■□ 3.21
CDKN1C-205ENST00000471157 C8orf37Q96NL8 207 aa35.1■■■■□ 3.21
CDKN1C-205ENST00000471157 ZNF772Q68DY9 489 aaPredicted RBP35.09■■■■□ 3.21
CDKN1C-205ENST00000471157 CCER1Q8TC90 406 aaPredicted RBP35.09■■■■□ 3.21
CDKN1C-205ENST00000471157 CABP2Q9NPB3 220 aa35.09■■■■□ 3.21
CDKN1C-205ENST00000471157 EVC2Q86UK5 1308 aa35.07■■■■□ 3.21
CDKN1C-205ENST00000471157 LMOD2Q6P5Q4 547 aa35.07■■■■□ 3.2
CDKN1C-205ENST00000471157 AFF2P51816 1311 aa35.06■■■■□ 3.2
CDKN1C-205ENST00000471157 ARHGEF10O15013 1369 aa35.06■■■■□ 3.2
CDKN1C-205ENST00000471157 TIMELESSQ9UNS1 1208 aa35.06■■■■□ 3.2
CDKN1C-205ENST00000471157 TRPM3Q9HCF6 1732 aaPredicted RBP35.06■■■■□ 3.2
CDKN1C-205ENST00000471157 PLEKHG3A1L390 1219 aa35.03■■■■□ 3.2
CDKN1C-205ENST00000471157 PPIP5K1Q6PFW1 1433 aa35.02■■■■□ 3.2
CDKN1C-205ENST00000471157 NGLY1Q96IV0 654 aa35.02■■■■□ 3.2
CDKN1C-205ENST00000471157 POLR3AO14802 1390 aaPredicted RBP35.01■■■■□ 3.2
CDKN1C-205ENST00000471157 ACEP12821 1306 aa35.01■■■■□ 3.19
CDKN1C-205ENST00000471157 SOCS7O14512 581 aa35■■■■□ 3.19
CDKN1C-205ENST00000471157 SBNO2Q9Y2G9 1366 aa35■■■■□ 3.19
CDKN1C-205ENST00000471157 PAK3O75914 559 aaPredicted RBP34.98■■■■□ 3.19
CDKN1C-205ENST00000471157 HAP1P54257 671 aaPredicted RBP34.97■■■■□ 3.19
CDKN1C-205ENST00000471157 ALS2Q96Q42 1657 aa34.97■■■■□ 3.19
CDKN1C-205ENST00000471157 PLEKHG5O94827 1062 aa34.96■■■■□ 3.19
CDKN1C-205ENST00000471157 MARF1Q9Y4F3 1742 aaKnown RBP34.95■■■■□ 3.19
CDKN1C-205ENST00000471157 CABLES1Q8TDN4 633 aa34.95■■■■□ 3.19
CDKN1C-205ENST00000471157 CABP1Q9NZU7 370 aa34.92■■■■□ 3.18
CDKN1C-205ENST00000471157 ABCA3Q99758 1704 aa34.91■■■■□ 3.18
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms